HHsearch alignment for GI: 254780163 and conserved domain: pfam00493

>pfam00493 MCM MCM2/3/5 family.
Probab=98.15  E-value=0.00026  Score=50.12  Aligned_cols=175  Identities=21%  Similarity=0.298  Sum_probs=89.1

Q ss_pred             CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHH----HHCCC---CCCCHHHHHHHHHHHHHCCC
Q ss_conf             677874896676411668999999998548988345201445540467----53063---43123789999999872038
Q gi|254780163|r  223 RSKNNPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGN----LIAGT---RYRGDFEERIKKIVKEIESY  295 (798)
Q Consensus       223 R~KNn~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~----l~ag~---~~rg~fe~r~~~~~~~~~~~  295 (798)
T Consensus        55 Rg~ihiLLvGdPG~gKSqlLk~~~~-~~pr---------~~~tsg~~ss~~GLTa~~~~d~~~~~~~leaGal---vlAd  121 (327)
T pfam00493        55 RGDINVLLVGDPGTAKSQLLKYVAK-LAPR---------AVYTSGKGSSAAGLTAAVVRDPDTGEWTLEAGAL---VLAD  121 (327)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHH-HCCC---------CEEECCCCCCCCCCEEEEEEECCCCCEEEECCCE---EECC
T ss_conf             3651189846998156099999998-6887---------0883177665677615899806888369836847---7558


Q ss_pred             CCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEE---------------EEEECCHHH--HH------HHHHCC
Q ss_conf             9839997361663015544434477788887663026603---------------887304899--99------985201
Q gi|254780163|r  296 ANAILYIDEIHTLVGAGSASGISVDASNLLKPALSSGAVR---------------CIGSTTYSE--YR------QFFEKD  352 (798)
Q Consensus       296 ~~~ilfideih~ligag~~~g~~~d~an~lkP~L~rg~~~---------------~IgatT~~e--y~------~~~e~d  352 (798)
T Consensus       122 -~Gv~cIDEfdk~--------~~~d~saL~-EAMEqqtVsIaKaGi~~tL~ar~sVlAaaNP~~g~yd~~~~~~~ni~Lp  191 (327)
T pfam00493       122 -GGVCCIDEFDKM--------NEEDRVAIH-EAMEQQTISIAKAGIVATLNARCSVLAAANPIFGRYDPKKSVAENINLP  191 (327)
T ss_pred             -CCEEEEECCCCC--------CHHHHHHHH-HHHHHCEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCHHHHCCCC
T ss_conf             -982785005558--------876799999-9998681776338538972587179985277677378888988855897


Q ss_pred             HHHHHHCEEE--EECCCCHHHHHHHHHHHHHHHHHHC------CCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf             1143200144--3068786899999986127665410------3512111789999986542015556467988998
Q gi|254780163|r  353 KALVRRFQKI--DVSEPSIEDAIEIVKGIKPYFEEHH------QLRYSKEAIRAAVQLSVRHFTSRKLPDKAIDVID  421 (798)
Q Consensus       353 ~al~rrF~~i--~v~ep~~~~~~~iL~~~~~~ye~~h------~v~~~~~al~~av~ls~ryi~~r~lPdkAidllD  421 (798)
T Consensus       192 ~~lLsRFDLif~l~D~~~~~~D~~ia~~i~~~~~~~~~~~~~~~~~~~~~~l~~yi~~ar~~~~P-~ls~ea~~~i~  267 (327)
T pfam00493       192 PPLLSRFDLIFVLLDKPDEEKDEELAKHIVDLHRHGEEEEIETEDYVDPELLRKYIAYARENIFP-KLSDEAREKLV  267 (327)
T ss_pred             HHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC-CCCHHHHHHHH
T ss_conf             67745010798840689868899999999998744688655568879999999999999852788-77989999999