HHsearch alignment for GI: 254780163 and conserved domain: pfam00931

Probab=96.24  E-value=0.022  Score=36.34  Aligned_cols=122  Identities=17%  Similarity=0.179  Sum_probs=60.1

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHC--C---CCEEEEEHHHHHCCC----CCCHHC
Q ss_conf             8999999999877520445657874068861432003889999987304--7---733772068861246----530110
Q gi|254780163|r  483 EEAIKKLSSSIKIARAGLSDPNKPIGCYVFSGPTGVGKTEISKQLAFAL--G---VQLLRFDMSEYMERH----AVSRLI  553 (798)
Q Consensus       483 ~~ai~~v~~~i~~~~~gl~~~~rP~g~flf~GptGvGKTelak~la~~~--~---~~lir~dmsey~e~~----~vs~Li  553 (798)
T Consensus         2 ~~~~~~i~~~L~~-------~~~~~~vI~I~G~gGiGKTtLA~~v~~~~~i~~~F~~~~wv~vs~~~~~~~i~~~i~~~l   74 (285)
T pfam00931         2 EDMIEALIEKLLE-------MSENLGVVGIVGMGGVGKTTLAKQIYNDDSVGGHFDSVAWVVVSKTYTEFRLQKDILQEL   74 (285)
T ss_pred             HHHHHHHHHHHHC-------CCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHH
T ss_conf             6899999999864-------898953999889995639999999971655650598389999797666899999999985


Q ss_pred             CCCCHHCCCC-C---CCCCCHHHHHCCCEEEEECCHHHCCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECC
Q ss_conf             4780002564-4---4310035551585177740445502899999999877750217799776125429999424
Q gi|254780163|r  554 GAPPGYVGFG-Q---GGILADSVDQNPYSVVLLDEIEKSHPDVLNILLQIMDYGILTDQSGKKISFRNVILIMTTN  625 (798)
Q Consensus       554 GappGYvG~~-e---gg~Lte~vr~~P~sVvl~DEiEKAh~~v~~~llqild~G~ltd~~Gr~vdf~n~iii~TsN  625 (798)
T Consensus        75 ~~~~~~~~~~~~~~l~~~l~~~L~~kr-~LiVLDDVw~--~~~~~~l~~~~~~~----~~-------gSrIIvTTR  136 (285)
T pfam00931        75 GLDDSDWVEKNESELAVKIKEALLRKR-FLLVLDDVWE--KNDWDKIGVPFPDG----EN-------GSRVIVTTR  136 (285)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHCCCC-EEEEECCCCC--HHHHHHHHCCCCCC----CC-------CCEEEEECC
T ss_conf             666545555789999999999972796-6999638887--89999973457578----99-------827998557