HHsearch alignment for GI: 254780163 and conserved domain: pfam02861
>pfam02861 Clp_N Clp amino terminal domain. This short domain is found in one or two copies at the amino terminus of ClpA and ClpB proteins from bacteria and eukaryotes. The function of these domains is uncertain but they may form a protein binding site.
Probab=97.62 E-value=0.00016 Score=51.60 Aligned_cols=50 Identities=22% Similarity=0.261 Sum_probs=45.9
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 99999980998125999878787377429999999849998999999983
Q gi|254780163|r 93 AVLHVQSTGRGIVTGANILVALFSEPDSHATYFLQEQEMTLYDAVNFISH 142 (798)
Q Consensus 93 A~~~A~~~G~~~I~~eHLLLALL~e~ds~a~~iL~~~gis~~~v~~~i~~ 142 (798)
T Consensus 1 A~~~A~~~~~~~i~~EHlLlall~~~~~~~~~il~~~g~~~~~l~~~i~~ 50 (53)
T pfam02861 1 AQELAKELGHQYIGTEHLLLALLEEDDGIAARLLKKAGVDLDALREAIEK 50 (53)
T ss_pred CHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 98889786998534999999998658858999999959899999999998