HHsearch alignment for GI: 254780163 and conserved domain: smart00350

Probab=98.31  E-value=7.3e-05  Score=54.12  Aligned_cols=223  Identities=17%  Similarity=0.172  Sum_probs=120.9

Q ss_pred             HHHHCCHHHHHHHCHHHHHHHHHHHHHH-HHCCCCCCCCCCC--EEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHH
Q ss_conf             4210000246653458999999999877-5204456578740--688614320038899999873047733772068861
Q gi|254780163|r  468 LSNLEKNLGTVVYGQEEAIKKLSSSIKI-ARAGLSDPNKPIG--CYVFSGPTGVGKTEISKQLAFALGVQLLRFDMSEYM  544 (798)
Q Consensus       468 l~~l~~~l~~~v~GQ~~ai~~v~~~i~~-~~~gl~~~~rP~g--~flf~GptGvGKTelak~la~~~~~~lir~dmsey~  544 (798)
T Consensus       194 ~~~L~~SiaP~I~G~~~vK~allL~L~GG~~~~~~~g~~~Rg~ihiLLvGDPGtgKSqlLk~~~~iaprsvytsG~----  269 (509)
T smart00350      194 YERLSRSLAPSIYGHEDIKKAILLLLFGGVHKNLPDGMKIRGDINILLLGDPGTAKSQLLKYVEKTAPRAVYTTGK----  269 (509)
T ss_pred             HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECC----
T ss_conf             9999985497323878899999999708876648988504154149984699823629999999858860687344----


Q ss_pred             CCCCCCHHCCCCC-HHC-C--CCCCCCCCHHHHHCCCEEEEECCHHHCCHHHHHHHHHHHHHHHCCCCCCC-EECC-CCE
Q ss_conf             2465301104780-002-5--64443100355515851777404455028999999998777502177997-7612-542
Q gi|254780163|r  545 ERHAVSRLIGAPP-GYV-G--FGQGGILADSVDQNPYSVVLLDEIEKSHPDVLNILLQIMDYGILTDQSGK-KISF-RNV  618 (798)
Q Consensus       545 e~~~vs~LiGapp-GYv-G--~~egg~Lte~vr~~P~sVvl~DEiEKAh~~v~~~llqild~G~ltd~~Gr-~vdf-~n~  618 (798)
T Consensus       270 -gsS~aGLTaav~rd~~~ge~~leaGALVl----AD~GiccIDEfdKm~~~dr~alhEaMEQQtisiaKaGi~~tL~aR~  344 (509)
T smart00350      270 -GSSAVGLTAAVTRDPETREFTLEGGALVL----ADNGVCCIDEFDKMDDSDRTAIHEAMEQQTISIAKAGITTTLNARC  344 (509)
T ss_pred             -CCCCCCCEEEEEECCCCCCEEECCCCEEC----CCCCEEEEEEHHHCCHHHHHHHHHHHHHCEEEEECCCEEEEEECCC
T ss_conf             -45557706899981788837872564120----5675478521320787789999999974877874375179985573


Q ss_pred             EEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCEEEEC-CCCCHHHHHHHHHHHHHH----------
Q ss_conf             999942421455330368988211148899999872887881776828962-889999999999999999----------
Q gi|254780163|r  619 ILIMTTNAGALEMSKARIGFGSSRNDDADKEALRNFLSPEFLNRLDSIIPF-FPLSSDIIRQVVHKFIMK----------  687 (798)
Q Consensus       619 iii~TsN~G~~~~~~~~~g~~~~~~~~~~~~~l~~~f~peflnRid~ii~F-~~l~~~~~~~i~~~~l~~----------  687 (798)
T Consensus       345 sVlAAaNP--------~--~g~yd~~~s~~e--ni~l~~~LLSRFDLIf~l~D~~~~~~D~~ia~hil~~h~~~~~~~~~  412 (509)
T smart00350      345 SVLAAANP--------I--GGRYDPKLTPEE--NIDLPAPILSRFDLLFVVLDEVDEERDRELAKHVVDLHRYSHPEPDE  412 (509)
T ss_pred             EEEEEECC--------C--CCCCCCCCCHHH--HCCCCHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             59986556--------5--563788899999--46898035410238999615898788999999999987415887545


Q ss_pred             ----------HHHH--HHHCCCEEEECHHHHHHHHH
Q ss_conf             ----------9999--98669889998899999997
Q gi|254780163|r  688 ----------LELQ--LQEKGISFHFSEEVINWLVS  711 (798)
Q Consensus       688 ----------l~~~--l~~~~i~l~~~~~~~~~l~~  711 (798)
T Consensus       413 ~~~~~~~~~~lrkYI~yar~~~~P~ls~eA~~~i~~  448 (509)
T smart00350      413 ADEVPISQEFLRKYIAYAREKIKPKLSEEAAEKLVK  448 (509)
T ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf             568868999999999999862899789999999999