HHsearch alignment for GI: 254780163 and conserved domain: smart00350

>smart00350 MCM minichromosome maintenance proteins.
Probab=97.86  E-value=0.0013  Score=45.10  Aligned_cols=180  Identities=18%  Similarity=0.232  Sum_probs=88.0

Q ss_pred             CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEEHHHHHCCC---CCCCHHHHHHHHHHHHHCCCCCEE
Q ss_conf             67787489667641166899999999854898834520144554046753063---431237899999998720389839
Q gi|254780163|r  223 RSKNNPLYVGDPGVGKTAIAEGFAKQIVDGMVPDILLGARIFSLDMGNLIAGT---RYRGDFEERIKKIVKEIESYANAI  299 (798)
Q Consensus       223 R~KNn~~lvG~~gvGktaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~---~~rg~fe~r~~~~~~~~~~~~~~i  299 (798)
T Consensus       234 Rg~ihiLLvGDPGtgKSqlLk~~~~-iaprsvytsG~g-----sS~aGLTaav~rd~~~ge~~leaGA---LVlAD~-Gi  303 (509)
T smart00350      234 RGDINILLLGDPGTAKSQLLKYVEK-TAPRAVYTTGKG-----SSAVGLTAAVTRDPETREFTLEGGA---LVLADN-GV  303 (509)
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHH-HCCCEEEEECCC-----CCCCCCEEEEEECCCCCCEEECCCC---EECCCC-CE
T ss_conf             1541499846998236299999998-588606873444-----5557706899981788837872564---120567-54


Q ss_pred             EEECCHHHHHCCCCCCCCCCCHHHHHHHHHCCCC---------------EEEEEECCHHHHHHH---------HHCCHHH
Q ss_conf             9973616630155444344777888876630266---------------038873048999998---------5201114
Q gi|254780163|r  300 LYIDEIHTLVGAGSASGISVDASNLLKPALSSGA---------------VRCIGSTTYSEYRQF---------FEKDKAL  355 (798)
Q Consensus       300 lfideih~ligag~~~g~~~d~an~lkP~L~rg~---------------~~~IgatT~~ey~~~---------~e~d~al  355 (798)
T Consensus       304 ccIDEfdKm~--------~~dr~-alhEaMEQQtisiaKaGi~~tL~aR~sVlAAaNP~-~g~yd~~~s~~eni~l~~~L  373 (509)
T smart00350      304 CCIDEFDKMD--------DSDRT-AIHEAMEQQTISIAKAGITTTLNARCSVLAAANPI-GGRYDPKLTPEENIDLPAPI  373 (509)
T ss_pred             EEEEEHHHCC--------HHHHH-HHHHHHHHCEEEEECCCEEEEEECCCEEEEEECCC-CCCCCCCCCHHHHCCCCHHH
T ss_conf             7852132078--------77899-99999974877874375179985573599865565-56378889999946898035


Q ss_pred             HHHCEEEE--ECCCCHHHHHHHHHHHHHHHH-------HHCCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf             32001443--068786899999986127665-------410351211178999998654201555646798899865
Q gi|254780163|r  356 VRRFQKID--VSEPSIEDAIEIVKGIKPYFE-------EHHQLRYSKEAIRAAVQLSVRHFTSRKLPDKAIDVIDEA  423 (798)
Q Consensus       356 ~rrF~~i~--v~ep~~~~~~~iL~~~~~~ye-------~~h~v~~~~~al~~av~ls~ryi~~r~lPdkAidllDea  423 (798)
T Consensus       374 LSRFDLIf~l~D~~~~~~D~~ia~hil~~h~~~~~~~~~~~~~~~~~~~lrkYI~yar~~~~P-~ls~eA~~~i~~~  449 (509)
T smart00350      374 LSRFDLLFVVLDEVDEERDRELAKHVVDLHRYSHPEPDEADEVPISQEFLRKYIAYAREKIKP-KLSEEAAEKLVKA  449 (509)
T ss_pred             HHHCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CCCHHHHHHHHHH
T ss_conf             410238999615898788999999999987415887545568868999999999999862899-7899999999999