HHsearch alignment for GI: 254780166 and conserved domain: COG2830
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=95.35 E-value=0.12 Score=28.81 Aligned_cols=182 Identities=13% Similarity=0.167 Sum_probs=85.8
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHCCCE-EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8999987888800122179999999868989-999647655422222222222212222222222222222222223443
Q gi|254780166|r 28 TILLIHGLASSVQTNWLFSGWIQLLCDQGFR-VIAFDNLGHGKSDKSYIENDYRLVFMAADAVSLLEHLGISKVHVMGYS 106 (261)
Q Consensus 28 ~vv~iHG~~~~~~~~~~~~~~~~~l~~~g~~-vi~~D~~G~G~S~~~~~~~~~s~~~~~~di~~~i~~l~~~~~~liGhS 106 (261)
T Consensus 13 LIvyFaGwgtpps~---v~HL---ilpeN~dl~lcYDY~dl--------~ldfDfs-------------Ay~hirlvAwS 65 (214)
T COG2830 13 LIVYFAGWGTPPSA---VNHL---ILPENHDLLLCYDYQDL--------NLDFDFS-------------AYRHIRLVAWS 65 (214)
T ss_pred EEEEEECCCCCHHH---HHHC---CCCCCCCEEEEEEHHHC--------CCCCCHH-------------HHHHHHHHHHH
T ss_conf 99998347898788---7440---27887747999602223--------7665524-------------43312322346
Q ss_pred CCCCCHHHHHHHCCCCCCCEEEECCCCCCCC-C---CHHHHHHHHHHHHCCCCCHHHHHHHH---HHCCC--CCCCCCCC
Q ss_conf 4443101333210235652389628856331-1---03569999998631111000011100---00000--03476654
Q gi|254780166|r 107 MGARIACSMVLFYPSYVRSVILGGVGSVLYD-S---DVVDWQSLIDSFLLPSIDEVQNPLGK---KFRKF--ADLDPGND 177 (261)
Q Consensus 107 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~ 177 (261)
T Consensus 66 MGVwvAeR~lqg~--~lksatAiNGTgLpcDds~GIp~AIF~gTL~nl~e~nr~kFerricg~k~~l~~yq~f~~rp~~e 143 (214)
T COG2830 66 MGVWVAERVLQGI--RLKSATAINGTGLPCDDSFGIPPAIFKGTLENLTENNRLKFERRICGDKASLEDYQIFPARPFLE 143 (214)
T ss_pred HHHHHHHHHHHHC--CCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHH
T ss_conf 7799999998116--61101345477888654579888999878850350127899998754601112321567671789
Q ss_pred HHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCC
Q ss_conf 13567776541012200121003576069984788878807999996799799998888738434
Q gi|254780166|r 178 LKALASCLSMIRKPFCQDDLYRIDVPVLIAVGSQDDLAGSPQELMSFIPSSQYLNICRRDHLLAV 242 (261)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~l~~~~p~~~~~~i~~~gH~~~~ 242 (261)
T Consensus 144 Ih~El~alfa~i~Qdrr~dli~W~---ka~v~skDkIFpp~nq~ayw~~rc~v~ei~g-~H~~F~ 204 (214)
T COG2830 144 IHQELTALFAMIQQDRRTDLILWD---KAYVGSKDKIFPPANQHAYWNARCAVIEING-EHYLFS 204 (214)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCCCCCHHHHHCCCEEEEEECC-CCEEEE
T ss_conf 999999999998501112343023---4430677720697306666400206888358-606776