HHsearch alignment for GI: 254780166 and conserved domain: COG4947

>COG4947 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=95.00  E-value=0.037  Score=31.91  Aligned_cols=180  Identities=19%  Similarity=0.215  Sum_probs=88.3

Q ss_pred             CCCEEEEEEECCCCCCEEEEECCCCCCCHH---HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC--
Q ss_conf             994999999648998789999878888001---221799999998689899996476554222222222222122222--
Q gi|254780166|r   12 RKYQFAFYDVGDKDAPTILLIHGLASSVQT---NWLFSGWIQLLCDQGFRVIAFDNLGHGKSDKSYIENDYRLVFMAA--   86 (261)
Q Consensus        12 dG~~l~y~~~g~~~~~~vv~iHG~~~~~~~---~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~s~~~~~~--   86 (261)
T Consensus        13 L~RdMel~ryGHaG~pVvvFpts~G-rf~eyed~G~v~ala~fi-e~G-~vQlft~~gld-sESf-~a~h~~~adr~~rH   87 (227)
T COG4947          13 LNRDMELNRYGHAGIPVVVFPTSGG-RFNEYEDFGMVDALASFI-EEG-LVQLFTLSGLD-SESF-LATHKNAADRAERH   87 (227)
T ss_pred             CCCHHHHHHCCCCCCCEEEEECCCC-CCHHHHHCCCHHHHHHHH-HCC-CEEEEEECCCC-HHHH-HHHCCCHHHHHHHH
T ss_conf             3630455641678973799766998-512345300289999998-608-27999843643-6767-65237878888988


Q ss_pred             --CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf             --222222222222222234434443101333210235652389628856331103569999998631111000011100
Q gi|254780166|r   87 --DAVSLLEHLGISKVHVMGYSMGARIACSMVLFYPSYVRSVILGGVGSVLYDSDVVDWQSLIDSFLLPSIDEVQNPLGK  164 (261)
Q Consensus        87 --di~~~i~~l~~~~~~liGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (261)
T Consensus        88 ~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdar------------dff-----------g~  144 (227)
T COG4947          88 RAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDAR------------DFF-----------GG  144 (227)
T ss_pred             HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEECHHHHHHHEEECCEEEHH------------HHC-----------CC
T ss_conf             9999999986647974315335356654313101816755330120130178------------860-----------55


Q ss_pred             HHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHCCC
Q ss_conf             000000347665413567776541012200121003576069984788878807999996799
Q gi|254780166|r  165 KFRKFADLDPGNDLKALASCLSMIRKPFCQDDLYRIDVPVLIAVGSQDDLAGSPQELMSFIPS  227 (261)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~l~~~~p~  227 (261)
T Consensus       145 yyddDv~---ynsP~---dylpg~~dp~~l~rlr~~~~--vfc~G~e~~~L~~~~~L~~~l~d  199 (227)
T COG4947         145 YYDDDVY---YNSPS---DYLPGLADPFRLERLRRIDM--VFCIGDEDPFLDNNQHLSRLLSD  199 (227)
T ss_pred             CCCCCEE---ECCHH---HHCCCCCCHHHHHHHHHCCE--EEEECCCCCCCCCHHHHHHHHCC
T ss_conf             4368423---25865---64567758699999864117--88805766566536899998441