HHsearch alignment for GI: 254780166 and conserved domain: COG4947
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=95.00 E-value=0.037 Score=31.91 Aligned_cols=180 Identities=19% Similarity=0.215 Sum_probs=88.3
Q ss_pred CCCEEEEEEECCCCCCEEEEECCCCCCCHH---HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC--
Q ss_conf 994999999648998789999878888001---221799999998689899996476554222222222222122222--
Q gi|254780166|r 12 RKYQFAFYDVGDKDAPTILLIHGLASSVQT---NWLFSGWIQLLCDQGFRVIAFDNLGHGKSDKSYIENDYRLVFMAA-- 86 (261)
Q Consensus 12 dG~~l~y~~~g~~~~~~vv~iHG~~~~~~~---~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~s~~~~~~-- 86 (261)
T Consensus 13 L~RdMel~ryGHaG~pVvvFpts~G-rf~eyed~G~v~ala~fi-e~G-~vQlft~~gld-sESf-~a~h~~~adr~~rH 87 (227)
T COG4947 13 LNRDMELNRYGHAGIPVVVFPTSGG-RFNEYEDFGMVDALASFI-EEG-LVQLFTLSGLD-SESF-LATHKNAADRAERH 87 (227)
T ss_pred CCCHHHHHHCCCCCCCEEEEECCCC-CCHHHHHCCCHHHHHHHH-HCC-CEEEEEECCCC-HHHH-HHHCCCHHHHHHHH
T ss_conf 3630455641678973799766998-512345300289999998-608-27999843643-6767-65237878888988
Q ss_pred --CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf --222222222222222234434443101333210235652389628856331103569999998631111000011100
Q gi|254780166|r 87 --DAVSLLEHLGISKVHVMGYSMGARIACSMVLFYPSYVRSVILGGVGSVLYDSDVVDWQSLIDSFLLPSIDEVQNPLGK 164 (261)
Q Consensus 87 --di~~~i~~l~~~~~~liGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (261)
T Consensus 88 ~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdar------------dff-----------g~ 144 (227)
T COG4947 88 RAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDAR------------DFF-----------GG 144 (227)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEECHHHHHHHEEECCEEEHH------------HHC-----------CC
T ss_conf 9999999986647974315335356654313101816755330120130178------------860-----------55
Q ss_pred HHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHCCC
Q ss_conf 000000347665413567776541012200121003576069984788878807999996799
Q gi|254780166|r 165 KFRKFADLDPGNDLKALASCLSMIRKPFCQDDLYRIDVPVLIAVGSQDDLAGSPQELMSFIPS 227 (261)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~l~~~~p~ 227 (261)
T Consensus 145 yyddDv~---ynsP~---dylpg~~dp~~l~rlr~~~~--vfc~G~e~~~L~~~~~L~~~l~d 199 (227)
T COG4947 145 YYDDDVY---YNSPS---DYLPGLADPFRLERLRRIDM--VFCIGDEDPFLDNNQHLSRLLSD 199 (227)
T ss_pred CCCCCEE---ECCHH---HHCCCCCCHHHHHHHHHCCE--EEEECCCCCCCCCHHHHHHHHCC
T ss_conf 4368423---25865---64567758699999864117--88805766566536899998441