HHsearch alignment for GI: 254780166 and conserved domain: PRK10115

>PRK10115 protease 2; Provisional.
Probab=98.69  E-value=5e-07  Score=60.86  Aligned_cols=232  Identities=16%  Similarity=0.094  Sum_probs=122.6

Q ss_pred             CEEEEEECCCCEEEEEEEC------CCCCCEEEEECC-CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC-----
Q ss_conf             4079993499499999964------899878999987-8888001221799999998689899996476554222-----
Q gi|254780166|r    4 EVKFFRSWRKYQFAFYDVG------DKDAPTILLIHG-LASSVQTNWLFSGWIQLLCDQGFRVIAFDNLGHGKSD-----   71 (261)
Q Consensus         4 ~~~~~~~~dG~~l~y~~~g------~~~~~~vv~iHG-~~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~-----   71 (261)
T Consensus       417 ~rv~~~SkDGt~VP~siv~rk~~~~dg~~P~lLyGYG~ygis~~p--~Fs~~~l~ll~rG~v~AiahvRGGgE~G~~Wh~  494 (686)
T PRK10115        417 EHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDA--DFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYE  494 (686)
T ss_pred             EEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCC--CCCHHHHHHHHCCCEEEEEECCCCCCCCCHHHH
T ss_conf             999998899978317999806887678987799997646663278--626657568658978999961578877447898


Q ss_pred             -CCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHH
Q ss_conf             -22222222212222222222222--222222223443444310133321023565238962885633110356999999
Q gi|254780166|r   72 -KSYIENDYRLVFMAADAVSLLEH--LGISKVHVMGYSMGARIACSMVLFYPSYVRSVILGGVGSVLYDSDVVDWQSLID  148 (261)
Q Consensus        72 -~~~~~~~~s~~~~~~di~~~i~~--l~~~~~~liGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~  148 (261)
T Consensus       495 ~G~~~~K~n~f~Dfia~ae~Li~~g~t~~~~l~~~G~SaGGLLvga~~n~~Pelf~a~v~~Vp~vD~l~~-~--------  565 (686)
T PRK10115        495 DGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINERPELFHGVIAQVPFVDVVTT-M--------  565 (686)
T ss_pred             HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCHHHHCEEEECCCCCCCEEC-C--------
T ss_conf             6656459647799999999999839998302899972758888999885195763557866772232121-3--------


Q ss_pred             HHHCCCCCHHHHHHH-HHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCC-CEEEEEECCCCCCCC--HHHHHHH
Q ss_conf             863111100001110-000000034766541356777654101220012100357-606998478887880--7999996
Q gi|254780166|r  149 SFLLPSIDEVQNPLG-KKFRKFADLDPGNDLKALASCLSMIRKPFCQDDLYRIDV-PVLIAVGSQDDLAGS--PQELMSF  224 (261)
Q Consensus       149 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~l~i~G~~D~~~~~--~~~l~~~  224 (261)
T Consensus       566 --~d~-----~~plt~~e~~E~G~---p~~~~~~~~i~~YsPy~nv~----~~~YP~~l~tt~~~D~RV~~~~~~K~~A~  631 (686)
T PRK10115        566 --LDE-----SIPLTTGEFEEWGN---PQDPQYYEYMKSYSPYDNVT----AQAYPHLLVTTGLHDSQVQYWEPAKWVAK  631 (686)
T ss_pred             --CCC-----CCCCCCCHHHHCCC---CCCHHHHHHHHHCCCHHCCC----CCCCCHHHEEECCCCCCCCCCHHHHHHHH
T ss_conf             --347-----87888641201379---68999999998659242589----78898687884268888797777999999


Q ss_pred             C----CCCEEEEE---CCCCCCCCCCCH---HHHHHHHHHHHHHCC
Q ss_conf             7----99799998---888738434848---999999999875168
Q gi|254780166|r  225 I----PSSQYLNI---CRRDHLLAVGDK---QFKQGVVNFYANELR  260 (261)
Q Consensus       225 ~----p~~~~~~i---~~~gH~~~~e~p---~~~~~i~~Fl~~~~~  260 (261)
T Consensus       632 L~~~~~~~~p~ll~~~~~aGHg~~~~~~~~~~e~A~~~aFll~~~~  677 (686)
T PRK10115        632 LRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLIALAQ  677 (686)
T ss_pred             HHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf             9863659970899964768677888889999999999999999730