HHsearch alignment for GI: 254780166 and conserved domain: pfam11339
>pfam11339 DUF3141 Protein of unknown function (DUF3141). This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=97.82 E-value=0.00022 Score=45.14 Aligned_cols=208 Identities=15% Similarity=0.222 Sum_probs=103.9
Q ss_pred CCCCCEEEEE-----CC--CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8998789999-----87--8888001221799999998689899996476554222222222222122222222222222
Q gi|254780166|r 23 DKDAPTILLI-----HG--LASSVQTNWLFSGWIQLLCDQGFRVIAFDNLGHGKSDKSYIENDYRLVFMAADAVSLLEHL 95 (261)
Q Consensus 23 ~~~~~~vv~i-----HG--~~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~s~~~~~~di~~~i~~l 95 (261)
T Consensus 65 D~~kRP~vViDPRAGHGpGIGGFK~-----DSeVGvAL~~GHPvYFV~F~-----p~P~p--GQTl~DV~~Aea~Fv~~V 132 (581)
T pfam11339 65 DPTKRPFVVIDPRAGHGPGIGGFKP-----DSEIGVALRAGHPCYFVGFL-----PDPEP--GQTLEDVMRAEAAFLREV 132 (581)
T ss_pred CCCCCCEEEECCCCCCCCCCCCCCC-----CCHHHHHHHCCCCEEEEEEC-----CCCCC--CCCHHHHHHHHHHHHHHH
T ss_conf 8888985997998888998778874-----20888998669986999874-----69989--888999999999999999
Q ss_pred -----CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCC----CCHH---------HHHHHHHH-H------
Q ss_conf -----222222234434443101333210235652389628856331----1035---------69999998-6------
Q gi|254780166|r 96 -----GISKVHVMGYSMGARIACSMVLFYPSYVRSVILGGVGSVLYD----SDVV---------DWQSLIDS-F------ 150 (261)
Q Consensus 96 -----~~~~~~liGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~----~~~~---------~~~~~~~~-~------ 150 (261)
T Consensus 133 ~~~HP~a~kP~viGNCQaGWa~~~lAA~~pdl~GPivlnGaPlSYWaG~~G~NPMRY~gGllGGsW~a~l~sDLG~G~FD 212 (581)
T pfam11339 133 IELHPDAPKPAVIGNCQAGWALLMLAALRPDLFGPIIVAGAPLSYWAGVRGKNPMRYSGGLLGGSWLTALTSDLGNGRFD 212 (581)
T ss_pred HHHCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCEEC
T ss_conf 98489999986894168999999998528787687666488741016777899514540453108899998761698115
Q ss_pred ---HCCCCCHHHH---HHHHHHCCCCCCCCCCC-HHHHHHHHHHH---------------------------CCCCCHHH
Q ss_conf ---3111100001---11000000003476654-13567776541---------------------------01220012
Q gi|254780166|r 151 ---LLPSIDEVQN---PLGKKFRKFADLDPGND-LKALASCLSMI---------------------------RKPFCQDD 196 (261)
Q Consensus 151 ---~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------------------------~~~~~~~~ 196 (261)
T Consensus 213 GA~LVqNFE~LNPant~W~KyY~Lya~vDtE~~RfLeFErWWgg~~~ln~~Ei~~Iv~nLFVGNrL~~g~~~~~~G~~~D 292 (581)
T pfam11339 213 GAWLVQNFENLNPANTLWGKYYNLYAKVDTEAPRFLEFERWWGGHVLLNGEEIQWIVDNLFVGNRLATGELRTSDGRRID 292 (581)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEECCHHHHHHHHHHHHCCCCCCCCCEECCCCCEEE
T ss_conf 08998665505901567887656653267642444447665185143279999999987530240035825638995753
Q ss_pred HHCCCCCEEEEEECCCCCCCCHHH---HHHHCCC-------CE---EEEECCCCCCCCC
Q ss_conf 100357606998478887880799---9996799-------79---9998888738434
Q gi|254780166|r 197 LYRIDVPVLIAVGSQDDLAGSPQE---LMSFIPS-------SQ---YLNICRRDHLLAV 242 (261)
Q Consensus 197 l~~i~~P~l~i~G~~D~~~~~~~~---l~~~~p~-------~~---~~~i~~~gH~~~~ 242 (261)
T Consensus 293 Lr~IrsPIvvFaS~GDNITPPqQAL~WI~dlY~~~~ei~a~gQ~IVY~~H~~vGHLGIF 351 (581)
T pfam11339 293 LRNIRSPIVVFCSYGDNITPPQQALNWIADLYADVEEIRAHGQTIVYCVHESVGHLGIF 351 (581)
T ss_pred HHHCCCCEEEEECCCCCCCCCHHHHCCHHHHCCCHHHHHHCCCEEEEEECCCCCCEEEE
T ss_conf 43267888999336888999657756288764899999858987999856987736778