Query gi|254780167|ref|YP_003064580.1| hypothetical protein CLIBASIA_00250 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 78
No_of_seqs 101 out of 207
Neff 3.6
Searched_HMMs 33803
Date Sun May 22 21:00:51 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780167.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >2jz8_A Uncharacterized protei 100.0 5.3E-34 1.6E-38 206.4 7.0 77 1-77 1-77 (87)
2 >2jvm_A Uncharacterized protei 99.9 4.1E-22 1.2E-26 141.4 7.7 72 1-72 3-77 (80)
3 >2jrr_A Uncharacterized protei 99.8 1.3E-21 4E-26 138.6 6.4 60 13-72 4-64 (67)
4 >1v54_F VI, cytochrome C oxida 95.5 0.019 5.7E-07 33.9 4.4 41 21-63 18-58 (62)
5 >2odx_A Cytochrome C oxidase p 94.2 0.071 2.1E-06 30.8 4.5 44 20-64 29-72 (80)
6 >1wjp_A Zinc finger protein 29 88.3 0.13 3.7E-06 29.5 0.4 12 48-59 42-53 (67)
7 >3iuf_A Zinc finger protein UB 81.9 0.31 9.3E-06 27.3 -0.0 23 43-65 2-24 (48)
8 >1vq0_A 33 kDa chaperonin; TM1 76.6 1.4 4.1E-05 23.8 1.9 17 47-63 27-43 (58)
9 >1vzy_A 33 kDa chaperonin; cha 72.5 1.9 5.6E-05 23.0 1.8 16 48-63 28-43 (54)
10 >2elp_A Zinc finger protein 40 65.2 2.6 7.6E-05 22.3 1.2 16 47-62 8-23 (37)
11 >1i7f_A Heat shock protein 33; 64.6 1.6 4.7E-05 23.5 0.0 17 47-63 81-97 (114)
12 >2i13_A AART; DNA binding, zin 63.2 1.9 5.5E-05 23.1 0.2 20 46-65 2-21 (28)
13 >2i13_A AART; DNA binding, zin 61.0 2.1 6.2E-05 22.8 0.1 20 46-65 1-20 (27)
14 >2adr_A ADR1; transcription re 60.3 2.1 6.2E-05 22.8 -0.0 20 46-65 2-21 (34)
15 >1ard_A Yeast transcription fa 59.1 1.3 4E-05 23.8 -1.2 16 50-65 4-19 (29)
16 >2els_A Zinc finger protein 40 58.4 2.6 7.8E-05 22.2 0.2 21 45-65 6-26 (36)
17 >1rik_A E6APC1 peptide; E6-bin 58.1 2.2 6.4E-05 22.7 -0.3 17 49-65 3-19 (29)
18 >1f2i_G Fusion of N-terminal 1 56.5 2.9 8.5E-05 22.0 0.2 20 46-65 2-21 (28)
19 >1a1h_A QGSR zinc finger pepti 56.5 2.9 8.5E-05 22.0 0.2 20 46-65 2-21 (28)
20 >2elt_A Zinc finger protein 40 55.9 2.4 7.2E-05 22.4 -0.3 21 45-65 6-26 (36)
21 >2ct1_A Transcriptional repres 55.6 2.5 7.3E-05 22.4 -0.3 21 45-65 12-32 (41)
22 >1llm_C Chimera of ZIF23-GCN4; 53.7 3.2 9.4E-05 21.8 0.0 19 47-65 2-20 (27)
23 >1va1_A Transcription factor S 52.8 3.1 9.1E-05 21.9 -0.2 22 45-66 5-28 (37)
24 >2ebt_A Krueppel-like factor 5 51.6 2 5.9E-05 22.9 -1.3 20 46-65 2-21 (29)
25 >2kfq_A FP1; protein, de novo 51.6 2.7 8.1E-05 22.2 -0.6 17 50-66 4-20 (32)
26 >1a1h_A QGSR zinc finger pepti 51.2 3.8 0.00011 21.4 0.1 20 46-65 2-21 (32)
27 >2i13_A AART; DNA binding, zin 49.8 4.3 0.00013 21.1 0.2 20 46-65 2-21 (29)
28 >1p7a_A BF3, BKLF, kruppel-lik 49.5 1.9 5.5E-05 23.1 -1.7 21 45-65 8-28 (37)
29 >1ubd_C Protein (YY1 zinc fing 49.2 3.6 0.00011 21.5 -0.3 20 46-65 2-23 (30)
30 >1fqt_A Rieske-type ferredoxin 48.9 11 0.00033 18.8 2.2 50 15-64 15-65 (72)
31 >1a1h_A QGSR zinc finger pepti 48.3 3.4 0.0001 21.6 -0.5 20 46-65 2-23 (30)
32 >2elq_A Zinc finger protein 40 48.1 4 0.00012 21.3 -0.2 21 45-65 6-26 (36)
33 >2csh_A Zinc finger protein 29 47.9 3.8 0.00011 21.4 -0.4 18 48-65 3-20 (28)
34 >2yt9_A Zinc finger-containing 47.4 3.7 0.00011 21.4 -0.4 20 46-65 1-20 (36)
35 >1x6e_A Zinc finger protein 24 46.5 5 0.00015 20.7 0.1 20 46-65 1-20 (33)
36 >2cot_A Zinc finger protein 43 44.9 5.2 0.00015 20.6 -0.1 20 46-65 2-21 (35)
37 >2gag_D Heterotetrameric sarco 43.9 7.7 0.00023 19.7 0.7 19 48-66 3-25 (99)
38 >1x6h_A Transcriptional repres 42.8 6.9 0.0002 20.0 0.3 21 45-65 12-32 (41)
39 >1pg5_B Aspartate carbamoyltra 41.4 21 0.00063 17.3 2.6 25 37-61 25-50 (62)
40 >2i13_A AART; DNA binding, zin 40.9 6.9 0.0002 20.0 0.1 20 46-65 2-21 (33)
41 >2epa_A Krueppel-like factor 1 39.9 5.6 0.00017 20.5 -0.5 22 45-66 6-29 (34)
42 >2ebt_A Krueppel-like factor 5 39.6 6.5 0.00019 20.1 -0.2 21 45-65 12-34 (41)
43 >1ubd_C Protein (YY1 zinc fing 39.4 6.1 0.00018 20.3 -0.4 21 46-66 2-24 (36)
44 >2waq_P DNA-directed RNA polym 39.1 13 0.0004 18.4 1.4 18 47-64 22-39 (48)
45 >2ebt_A Krueppel-like factor 5 38.6 6.4 0.00019 20.1 -0.4 20 46-65 2-23 (30)
46 >2gli_A Protein (five-finger G 36.8 14 0.00041 18.3 1.1 22 46-67 1-24 (38)
47 >1rim_A E6APC2 peptide; E6-bin 35.8 6.4 0.00019 20.1 -0.7 17 49-65 3-19 (33)
48 >2jp9_A Wilms tumor 1; DNA bin 35.4 9.2 0.00027 19.3 0.0 19 47-65 2-20 (27)
49 >2cot_A Zinc finger protein 43 34.6 5.2 0.00015 20.6 -1.4 21 45-65 15-35 (42)
50 >1bbo_A Human enhancer-binding 33.6 6 0.00018 20.3 -1.2 16 50-65 3-18 (33)
51 >2en2_A B-cell lymphoma 6 prot 33.5 8.2 0.00024 19.5 -0.5 22 45-66 8-29 (42)
52 >2b1x_A Naphthalene dioxygenas 33.2 24 0.00071 17.0 1.9 45 23-67 25-69 (80)
53 >2ept_A Zinc finger protein 32 32.9 12 0.00036 18.6 0.3 21 45-65 7-27 (41)
54 >1f2i_G Fusion of N-terminal 1 32.8 12 0.00034 18.7 0.2 21 45-65 16-38 (45)
55 >1llm_C Chimera of ZIF23-GCN4; 32.7 11 0.00033 18.8 0.1 20 46-65 2-21 (61)
56 >2yww_A Aspartate carbamoyltra 32.5 23 0.00067 17.1 1.7 24 38-61 25-49 (52)
57 >2jp9_A Wilms tumor 1; DNA bin 31.7 9.6 0.00028 19.2 -0.4 20 46-65 2-23 (31)
58 >2epv_A Zinc finger protein 26 31.6 12 0.00036 18.6 0.2 22 45-66 9-30 (44)
59 >1x6e_A Zinc finger protein 24 31.4 13 0.00039 18.4 0.3 21 45-65 11-31 (39)
60 >2jp9_A Wilms tumor 1; DNA bin 31.1 5.9 0.00017 20.3 -1.5 22 45-66 3-26 (32)
61 >2gli_A Protein (five-finger G 30.3 5.4 0.00016 20.5 -1.8 20 46-65 2-23 (31)
62 >2enc_A Zinc finger protein 22 30.1 11 0.00032 18.9 -0.3 21 45-65 9-29 (46)
63 >2yrk_A Zinc finger homeobox p 29.5 14 0.00041 18.3 0.1 17 48-64 13-29 (55)
64 >2d9h_A Zinc finger protein 69 29.5 23 0.00067 17.2 1.2 17 48-64 5-21 (45)
65 >2eml_A Zinc finger protein 28 29.4 14 0.00041 18.3 0.1 21 45-65 9-29 (46)
66 >1zfd_A SWI5; DNA binding moti 29.3 6.6 0.00019 20.1 -1.6 19 47-65 2-22 (32)
67 >2poi_A Baculoviral IAP repeat 29.2 35 0.001 16.1 2.1 20 40-59 47-66 (94)
68 >2jp9_A Wilms tumor 1; DNA bin 29.1 11 0.00034 18.8 -0.4 20 46-65 2-23 (29)
69 >2qra_D XIAP, baculoviral IAP 28.9 35 0.001 16.1 2.1 20 40-59 64-83 (111)
70 >2air_B Aspartate carbamoyltra 28.5 45 0.0013 15.5 2.6 24 38-61 30-55 (60)
71 >2eme_A Zinc finger protein 47 28.1 15 0.00045 18.1 0.2 21 45-65 9-29 (46)
72 >2dmd_A Zinc finger protein 64 28.0 9 0.00026 19.3 -1.1 21 45-65 5-25 (38)
73 >1tf6_A Protein (transcription 27.9 5.9 0.00017 20.4 -2.0 20 46-65 2-23 (36)
74 >2yu5_A Zinc finger protein 47 27.6 18 0.00054 17.7 0.5 22 45-66 9-30 (44)
75 >1njq_A Superman protein; zinc 27.2 26 0.00077 16.8 1.2 13 47-59 5-17 (39)
76 >2j6a_A Protein TRM112; transl 26.9 32 0.00094 16.3 1.6 19 45-63 106-124 (141)
77 >2i3h_A Baculoviral IAP repeat 26.8 45 0.0013 15.5 2.3 21 40-60 74-94 (133)
78 >2be7_D Aspartate carbamoyltra 26.8 30 0.00088 16.5 1.4 24 39-62 25-50 (55)
79 >3hl5_A Baculoviral IAP repeat 26.4 39 0.0011 15.9 2.0 20 40-59 38-57 (95)
80 >1klr_A Zinc finger Y-chromoso 26.3 11 0.00033 18.8 -0.8 17 49-65 3-19 (30)
81 >2eos_A B-cell lymphoma 6 prot 26.2 7.9 0.00023 19.6 -1.6 22 45-66 8-29 (42)
82 >2en8_A Zinc finger protein 22 26.0 17 0.00051 17.8 0.1 21 45-65 9-29 (46)
83 >2em8_A Zinc finger protein 22 25.7 18 0.00052 17.7 0.1 21 45-65 9-29 (46)
84 >2eoz_A Zinc finger protein 47 25.7 14 0.00042 18.3 -0.4 21 45-65 9-29 (46)
85 >2el5_A Zinc finger protein 26 25.7 18 0.00052 17.7 0.1 21 45-65 7-27 (42)
86 >2e7j_A SEP-tRNA:Cys-tRNA synt 25.6 22 0.00066 17.2 0.6 30 45-74 15-44 (66)
87 >2ct5_A Zinc finger BED domain 25.6 20 0.00058 17.5 0.3 18 46-63 27-44 (73)
88 >2eoy_A Zinc finger protein 47 25.5 22 0.00064 17.3 0.5 22 45-66 9-30 (46)
89 >2emb_A Zinc finger protein 47 25.5 15 0.00044 18.1 -0.3 22 45-66 9-30 (44)
90 >2el4_A Zinc finger protein 26 25.4 19 0.00055 17.6 0.2 22 45-66 9-30 (46)
91 >2yso_A ZFP-95, zinc finger pr 25.4 19 0.00057 17.5 0.2 21 45-65 9-29 (46)
92 >1z01_A 2-OXO-1,2-dihydroquino 25.2 50 0.0015 15.2 2.4 21 45-65 99-119 (174)
93 >2vm5_A Baculoviral IAP repeat 24.7 52 0.0015 15.2 2.3 20 40-59 48-67 (106)
94 >2csh_A Zinc finger protein 29 24.6 19 0.00055 17.6 0.1 18 47-64 2-19 (48)
95 >2de6_A Terminal oxygenase com 24.6 56 0.0017 15.0 3.2 32 32-63 70-102 (147)
96 >2nyk_A M157; LY49, NK cells, 23.9 58 0.0017 14.9 2.5 22 35-56 44-65 (166)
97 >2epc_A Zinc finger protein 32 23.9 21 0.00062 17.3 0.2 21 45-65 8-28 (42)
98 >2yu8_A Zinc finger protein 34 23.7 24 0.0007 17.0 0.5 21 45-65 9-29 (46)
99 >1jd5_A DIAP1, apoptosis 1 inh 23.6 56 0.0017 15.0 2.3 20 40-59 52-71 (75)
100 >1sp2_A SP1F2; zinc finger, tr 23.3 12 0.00035 18.7 -1.2 18 49-66 3-22 (31)
101 >2ctu_A Zinc finger protein 48 23.3 59 0.0018 14.9 2.9 21 46-66 16-36 (73)
102 >3d9t_A Baculoviral IAP repeat 23.1 58 0.0017 14.9 2.3 20 40-59 40-59 (97)
103 >1se0_A Apoptosis 1 inhibitor; 22.8 59 0.0018 14.9 2.3 20 40-59 40-59 (116)
104 >2ent_A Krueppel-like factor 1 22.6 23 0.00069 17.1 0.3 22 45-66 9-32 (48)
105 >2emh_A Zinc finger protein 48 22.3 22 0.00066 17.2 0.1 21 45-65 9-29 (46)
106 >2emx_A Zinc finger protein 26 21.8 25 0.00074 16.9 0.3 21 45-65 7-27 (44)
107 >2el6_A Zinc finger protein 26 21.7 20 0.00058 17.5 -0.3 22 45-66 9-30 (46)
108 >2yts_A Zinc finger protein 48 21.6 24 0.0007 17.0 0.1 22 45-66 9-30 (46)
109 >2adr_A ADR1; transcription re 21.3 12 0.00036 18.6 -1.4 18 49-66 3-20 (26)
110 >2emy_A Zinc finger protein 26 21.3 25 0.00075 16.9 0.2 21 45-65 9-29 (46)
111 >2en3_A ZFP-95, zinc finger pr 21.2 28 0.00083 16.6 0.4 21 45-65 9-29 (46)
112 >2eps_A POZ-, at HOOK-, and zi 21.0 26 0.00076 16.8 0.2 22 45-66 9-30 (54)
113 >2emj_A Zinc finger protein 28 20.9 26 0.00076 16.8 0.2 21 45-65 9-29 (46)
114 >2epw_A Zinc finger protein 26 20.8 29 0.00086 16.6 0.4 21 45-65 9-29 (46)
115 >2eox_A Zinc finger protein 47 20.7 25 0.00075 16.9 0.1 22 45-66 9-30 (44)
116 >2eom_A ZFP-95, zinc finger pr 20.5 14 0.00041 18.3 -1.3 21 45-65 9-29 (46)
117 >2em5_A ZFP-95, zinc finger pr 20.1 26 0.00078 16.8 0.1 21 45-65 9-29 (46)
No 1
>>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str} (A:)
Probab=100.00 E-value=5.3e-34 Score=206.39 Aligned_cols=77 Identities=60% Similarity=1.158 Sum_probs=76.3
Q ss_pred CCCCCCCCEECCCCCCEEEECCEEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCEEEECCCCCCCCCCCCCCEEE
Q ss_conf 97557864112479851994654999937899889867999959998899888882136546768444688002461
Q gi|254780167|r 1 MVDHPIPHFQNDRGHSRIKIGVKKFMCAGTSPPLDHPHVFINMGEENEKHCPYCSTLYHFDSSLDSKETLPVGCLLS 77 (78)
Q Consensus 1 Ma~~~~P~f~nd~g~~~I~v~~~~v~CdGg~g~lgHP~V~l~l~~~~~v~C~YC~~~fv~~~~l~~~es~P~~c~~~ 77 (78)
||+|.+|||+||.|+++|+|++|+|||.|+.+|++||+|||+||++++++|||||++|+|+++|+++|++|++|+|+
T Consensus 1 MA~h~iPHF~Nd~G~~~I~iGvkEFMCvGA~pPfDHPHvFlDMG~d~E~iCpYCSTLYry~~~L~~~~t~P~~C~~~ 77 (87)
T 2jz8_A 1 MADYNIPHFQNDLGYKIIEIGVKEFMCVGATQPFDHPHIFIDMGSTDEKICPYCSTLYRYDPSLSYNQTNPTGCLYN 77 (87)
T ss_dssp CCSSCCCCBCCSSCCSEEECSCSEEECCCSSCSSSSSSCEEECTTCCEECCTTTCCEEECCTTSCTTCCCSSCCBCC
T ss_pred CCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCEEEECCCCCCCCCCCCCCEEC
T ss_conf 98766876435789765996983999719999899988989759999798889998878477777675389876714
No 2
>>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2} (A:)
Probab=99.86 E-value=4.1e-22 Score=141.41 Aligned_cols=72 Identities=19% Similarity=0.313 Sum_probs=62.8
Q ss_pred CCCCCCCCEECC--CCCCEEEECCEEEEEECCCCCCCCCEEEEECCCC-CEEECCCCCCEEEECCCCCCCCCCCC
Q ss_conf 975578641124--7985199465499993789988986799995999-88998888821365467684446880
Q gi|254780167|r 1 MVDHPIPHFQND--RGHSRIKIGVKKFMCAGTSPPLDHPHVFINMGEE-NEKHCPYCSTLYHFDSSLDSKETLPV 72 (78)
Q Consensus 1 Ma~~~~P~f~nd--~g~~~I~v~~~~v~CdGg~g~lgHP~V~l~l~~~-~~v~C~YC~~~fv~~~~l~~~es~P~ 72 (78)
|-..+.|.++.+ +.+|+|.|++++|+||||+||||||+|||+||++ ++++|+|||+||+++...+..++-+.
T Consensus 3 ~~~~~~~~~a~~li~~~~~~~v~~~~vaCDGg~gaLGHPrVyi~ld~~~g~~~C~YCg~rfv~~~~~~~~~~h~~ 77 (80)
T 2jvm_A 3 RQPKTRQESARMSIEAPETVVVSTWKVACDGGEGALGHPRVWLSIPHETGFVECGYCDRRYIHESFAAAKLEHHH 77 (80)
T ss_dssp CCCCCCCCCCCCCCSCCSEEEESCSEEEECCCSTTCCCCCEEEECCTTTCEEECSSSSCEEEEHHHHSCCSCCCC
T ss_pred CCCCCCCCCHHHCCCCCCEEEECCCEEEECCCCCCCCCCEEEEECCCCCCEEECCCCCCEEECHHHHHHHHHHHC
T ss_conf 675688867333568997189807799951999989998897875899986988899885560667877665401
No 3
>>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi} (A:)
Probab=99.85 E-value=1.3e-21 Score=138.58 Aligned_cols=60 Identities=22% Similarity=0.467 Sum_probs=54.8
Q ss_pred CCCCEEEECCEEEEEECCCCCCCCCEEEEECCCC-CEEECCCCCCEEEECCCCCCCCCCCC
Q ss_conf 7985199465499993789988986799995999-88998888821365467684446880
Q gi|254780167|r 13 RGHSRIKIGVKKFMCAGTSPPLDHPHVFINMGEE-NEKHCPYCSTLYHFDSSLDSKETLPV 72 (78)
Q Consensus 13 ~g~~~I~v~~~~v~CdGg~g~lgHP~V~l~l~~~-~~v~C~YC~~~fv~~~~l~~~es~P~ 72 (78)
+.+|+|+|++++|+||||+||||||+|||+||++ ++++|+|||+||+++...+..++.+.
T Consensus 4 ~~~~~~~v~~~~vaCDGG~gaLGHPrVyi~ld~~~~~v~C~YCg~rfv~~~~~~~~~~~~~ 64 (67)
T 2jrr_A 4 QAPETKIVDKSRVACDGGEGALGHPRVWLQIPEDTGWVECPYCDCKYVLKGSKADALEHHH 64 (67)
T ss_dssp CCCEEEEESSSEEEEEESSTTSEEEEEEEECCTTTSEEEETTTTEEEEETTSGGGCCSCCC
T ss_pred CCCCEEEEECEEEEECCCCCCCCCCEEEEECCCCCCEEECCCCCCEEEECCCCCCCCCCCC
T ss_conf 8984799907199957999989999899984699997988888889897788555522222
No 4
>>1v54_F VI, cytochrome C oxidase polypeptide VB; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} (F:37-98)
Probab=95.51 E-value=0.019 Score=33.93 Aligned_cols=41 Identities=15% Similarity=0.411 Sum_probs=36.0
Q ss_pred CCEEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCEEEECCC
Q ss_conf 6549999378998898679999599988998888821365467
Q gi|254780167|r 21 GVKKFMCAGTSPPLDHPHVFINMGEENEKHCPYCSTLYHFDSS 63 (78)
Q Consensus 21 ~~~~v~CdGg~g~lgHP~V~l~l~~~~~v~C~YC~~~fv~~~~ 63 (78)
+.|.|-|.|... .|-.+|+.|.++.+..|+.||.-|++..-
T Consensus 18 ~~RiVGC~g~~d--~h~v~W~~l~~g~p~RC~eCG~~fkL~~~ 58 (62)
T 1v54_F 18 NKRIVGCICEED--NSTVIWFWLHKGEAQRCPSCGTHYKLVPH 58 (62)
T ss_dssp SEEEEEECCSTT--CSCCEEEEEESSSCEECTTTCCEEEEECC
T ss_pred CCEEEEECCCCC--CCEEEEEEEECCCCCCCCCCCCEEEEEEC
T ss_conf 864885527887--75338899757997526878848998643
No 5
>>2odx_A Cytochrome C oxidase polypeptide IV; all beta-protein, metallo-protein, oxidoreductase; NMR {Saccharomyces cerevisiae} (A:)
Probab=94.23 E-value=0.071 Score=30.82 Aligned_cols=44 Identities=14% Similarity=0.330 Sum_probs=36.2
Q ss_pred ECCEEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCEEEECCCC
Q ss_conf 465499993789988986799995999889988888213654676
Q gi|254780167|r 20 IGVKKFMCAGTSPPLDHPHVFINMGEENEKHCPYCSTLYHFDSSL 64 (78)
Q Consensus 20 v~~~~v~CdGg~g~lgHP~V~l~l~~~~~v~C~YC~~~fv~~~~l 64 (78)
-+.|.|-|.|... =.|-.+|+.|.++....|+=||.-|++..--
T Consensus 29 ~~~RiVGC~~~~~-Dsh~v~W~~l~~g~p~RC~eCG~~fkL~~~~ 72 (80)
T 2odx_A 29 DDYRYVGCTGSPA-GSHTIMWLKPTVNEVARCWECGSVYKLNPVG 72 (80)
T ss_dssp SSSCCEEESSSTT-CCSCCEEECCCTTCEEECSSSCCEEEECCCC
T ss_pred CCCEEEEECCCCC-CCCEEEEEEECCCCCCCCCCCCCEEEEEEEC
T ss_conf 9866987716788-8636689997179855667788599998827
No 6
>>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} (A:1-67)
Probab=88.28 E-value=0.13 Score=29.48 Aligned_cols=12 Identities=42% Similarity=1.101 Sum_probs=10.2
Q ss_pred EEECCCCCCEEE
Q ss_conf 899888882136
Q gi|254780167|r 48 EKHCPYCSTLYH 59 (78)
Q Consensus 48 ~v~C~YC~~~fv 59 (78)
-.+|||||+||-
T Consensus 42 atvCPYCsLRF~ 53 (67)
T 1wjp_A 42 AAVCPYCSLRFF 53 (67)
T ss_dssp SBCCTTTCCCBS
T ss_pred CCEECCCCCCCC
T ss_conf 838558988766
No 7
>>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, apoptosis, cytoplasm, metal-binding, nucleus, phosphoprotein, transcription; 1.80A {Homo sapiens} (A:)
Probab=81.92 E-value=0.31 Score=27.29 Aligned_cols=23 Identities=17% Similarity=0.419 Sum_probs=19.6
Q ss_pred CCCCCEEECCCCCCEEEECCCCC
Q ss_conf 59998899888882136546768
Q gi|254780167|r 43 MGEENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 43 l~~~~~v~C~YC~~~fv~~~~l~ 65 (78)
++++++-.|.+|++||+-+..|+
T Consensus 2 ~d~~KPy~C~vCgKrYKN~~GL~ 24 (48)
T 3iuf_A 2 EDRDKPYACDICGKRYKNRPGLS 24 (48)
T ss_dssp CTTTSCEECTTTCCEESSHHHHH
T ss_pred CCCCCCCCCHHHHHHHCCCCCCH
T ss_conf 86677611504555543787620
No 8
>>1vq0_A 33 kDa chaperonin; TM1394, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: UNL; 2.20A {Thermotoga maritima} (A:245-302)
Probab=76.63 E-value=1.4 Score=23.78 Aligned_cols=17 Identities=35% Similarity=0.817 Sum_probs=14.1
Q ss_pred CEEECCCCCCEEEECCC
Q ss_conf 88998888821365467
Q gi|254780167|r 47 NEKHCPYCSTLYHFDSS 63 (78)
Q Consensus 47 ~~v~C~YC~~~fv~~~~ 63 (78)
-.++|-||+++|+++..
T Consensus 27 iev~C~fC~~~Y~f~~~ 43 (58)
T 1vq0_A 27 GEVVCKWCNTRYVFSEE 43 (58)
T ss_dssp EEEECTTTCCEEEECHH
T ss_pred EEEEEECCCCEEEECHH
T ss_conf 39999898997986999
No 9
>>1vzy_A 33 kDa chaperonin; chaperone, heat shock protein, crystal engineering, molecular chaperone, redox-active center, PSI; 1.97A {Bacillus subtilis} (A:238-291)
Probab=72.54 E-value=1.9 Score=23.02 Aligned_cols=16 Identities=31% Similarity=0.835 Sum_probs=13.6
Q ss_pred EEECCCCCCEEEECCC
Q ss_conf 8998888821365467
Q gi|254780167|r 48 EKHCPYCSTLYHFDSS 63 (78)
Q Consensus 48 ~v~C~YC~~~fv~~~~ 63 (78)
.+.|-||++.|.+++.
T Consensus 28 ev~C~FC~~~Y~f~~~ 43 (54)
T 1vzy_A 28 EAVCHFCNEKYLFTKE 43 (54)
T ss_dssp EEECTTTCCEEEEEHH
T ss_pred EEEEECCCCEEEECHH
T ss_conf 9997687998987999
No 10
>>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=65.21 E-value=2.6 Score=22.31 Aligned_cols=16 Identities=25% Similarity=0.818 Sum_probs=12.4
Q ss_pred CEEECCCCCCEEEECC
Q ss_conf 8899888882136546
Q gi|254780167|r 47 NEKHCPYCSTLYHFDS 62 (78)
Q Consensus 47 ~~v~C~YC~~~fv~~~ 62 (78)
.-.-||||+..|.-+.
T Consensus 8 RA~KCPyCd~~F~kng 23 (37)
T 2elp_A 8 RAMKCPYCDFYFMKNG 23 (37)
T ss_dssp CCEECSSSSCEECSSC
T ss_pred CCCCCCCCHHHHHHCC
T ss_conf 6314873047885056
No 11
>>1i7f_A Heat shock protein 33; HSP33, redox sensitive molecular chaperone; 2.70A {Escherichia coli} (A:179-292)
Probab=64.59 E-value=1.6 Score=23.45 Aligned_cols=17 Identities=35% Similarity=0.975 Sum_probs=13.9
Q ss_pred CEEECCCCCCEEEECCC
Q ss_conf 88998888821365467
Q gi|254780167|r 47 NEKHCPYCSTLYHFDSS 63 (78)
Q Consensus 47 ~~v~C~YC~~~fv~~~~ 63 (78)
-+++|.||+++|.++..
T Consensus 81 iEv~C~FC~~~Y~f~~~ 97 (114)
T 1i7f_A 81 IDXHCDYCGNHYLFNAM 97 (114)
T ss_dssp -----------------
T ss_pred EEEEEECCCCEEEECHH
T ss_conf 89991477988988999
No 12
>>2i13_A AART; DNA binding, zinc finger, DNA binding protein/DNA complex; 1.96A {Mus musculus} (A:130-157)
Probab=63.17 E-value=1.9 Score=23.06 Aligned_cols=20 Identities=25% Similarity=0.649 Sum_probs=16.6
Q ss_pred CCEEECCCCCCEEEECCCCC
Q ss_conf 98899888882136546768
Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~ 65 (78)
+++-.|..||+.|...+.|.
T Consensus 2 EKPy~C~~Cgk~F~~~s~L~ 21 (28)
T 2i13_A 2 EKPYKCPECGKSFSREDNLH 21 (28)
T ss_dssp CCCEECTTTCCEESCHHHHH
T ss_pred CCCEECCCCCCCCCCCCCCC
T ss_conf 87700576444231112223
No 13
>>2i13_A AART; DNA binding, zinc finger, DNA binding protein/DNA complex; 1.96A {Mus musculus} (A:103-129)
Probab=61.01 E-value=2.1 Score=22.79 Aligned_cols=20 Identities=25% Similarity=0.504 Sum_probs=16.0
Q ss_pred CCEEECCCCCCEEEECCCCC
Q ss_conf 98899888882136546768
Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~ 65 (78)
+++-.|..||+.|...+.|.
T Consensus 1 EKPy~C~~CgK~F~~~s~L~ 20 (27)
T 2i13_A 1 EKPYACPECGKSFSQLAHLR 20 (27)
T ss_dssp CCCEECTTTCCEESSHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHC
T ss_conf 86803897887222034420
No 14
>>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} (A:27-60)
Probab=60.33 E-value=2.1 Score=22.79 Aligned_cols=20 Identities=20% Similarity=0.360 Sum_probs=16.0
Q ss_pred CCEEECCCCCCEEEECCCCC
Q ss_conf 98899888882136546768
Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~ 65 (78)
+.+-.|++|++.|.....|.
T Consensus 2 EKPf~C~~Cgk~F~R~d~L~ 21 (34)
T 2adr_A 2 EKPYPCGLCNRAFTRRDLLI 21 (34)
T ss_dssp SCSEECTTTCCEESSHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHH
T ss_conf 32666785698907789999
No 15
>>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} (A:)
Probab=59.09 E-value=1.3 Score=23.84 Aligned_cols=16 Identities=19% Similarity=0.542 Sum_probs=13.4
Q ss_pred ECCCCCCEEEECCCCC
Q ss_conf 9888882136546768
Q gi|254780167|r 50 HCPYCSTLYHFDSSLD 65 (78)
Q Consensus 50 ~C~YC~~~fv~~~~l~ 65 (78)
.|+||++.|...+.|+
T Consensus 4 ~C~~Cgk~F~r~~~L~ 19 (29)
T 1ard_A 4 VCEVCTRAFARQEHLK 19 (29)
T ss_dssp BCTTTCCBCSSHHHHH
T ss_pred CCCCCCCCCCCCHHCC
T ss_conf 9989989988723715
No 16
>>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=58.45 E-value=2.6 Score=22.24 Aligned_cols=21 Identities=29% Similarity=0.747 Sum_probs=17.3
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+.+-.|++|++.|...+.|.
T Consensus 6 geKpy~C~~Cgk~F~~~s~L~ 26 (36)
T 2els_A 6 SGKIFTCEYCNKVFKFKHSLQ 26 (36)
T ss_dssp CCCCEECTTTCCEESSHHHHH
T ss_pred CCCEEEEHHHHHHHHHHHHHH
T ss_conf 774575156545775777778
No 17
>>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} (A:)
Probab=58.11 E-value=2.2 Score=22.72 Aligned_cols=17 Identities=24% Similarity=0.540 Sum_probs=14.0
Q ss_pred EECCCCCCEEEECCCCC
Q ss_conf 99888882136546768
Q gi|254780167|r 49 KHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 49 v~C~YC~~~fv~~~~l~ 65 (78)
-.|+.|+++|.....|+
T Consensus 3 f~C~~C~k~F~RsdHL~ 19 (29)
T 1rik_A 3 FACPECPKRFMRSDHLT 19 (29)
T ss_dssp EECSSSSCEESCSHHHH
T ss_pred CCCCCCCCCCCCHHHHH
T ss_conf 43776655321028899
No 18
>>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} (G:46-73)
Probab=56.46 E-value=2.9 Score=22.04 Aligned_cols=20 Identities=15% Similarity=0.388 Sum_probs=16.6
Q ss_pred CCEEECCCCCCEEEECCCCC
Q ss_conf 98899888882136546768
Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~ 65 (78)
+++-.|..||+.|...+.|.
T Consensus 2 EKPy~C~~Cgk~F~~~s~L~ 21 (28)
T 1f2i_G 2 QKPFQCRICMRNFSRSDHLT 21 (28)
T ss_dssp CCCEECTTTCCEESCHHHHH
T ss_pred CCCEECCCCCCCCCCHHHHH
T ss_conf 81817998988738888997
No 19
>>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), zinc finger, DNA-binding protein; HET: DNA; 1.60A {Mus musculus} (A:31-58)
Probab=56.46 E-value=2.9 Score=22.04 Aligned_cols=20 Identities=15% Similarity=0.388 Sum_probs=16.6
Q ss_pred CCEEECCCCCCEEEECCCCC
Q ss_conf 98899888882136546768
Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~ 65 (78)
+++-.|..||+.|...+.|.
T Consensus 2 EKPy~C~~Cgk~F~~~s~L~ 21 (28)
T 1a1h_A 2 QKPFQCRICMRNFSRSDHLT 21 (28)
T ss_dssp CCCEECTTTCCEESCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCC
T ss_conf 42100133566411133110
No 20
>>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=55.86 E-value=2.4 Score=22.43 Aligned_cols=21 Identities=24% Similarity=0.528 Sum_probs=17.2
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+.+-.|++|++.|...+.|+
T Consensus 6 geKpy~C~~Cgk~F~~~s~L~ 26 (36)
T 2elt_A 6 SGKPYKCPQCSYASAIKANLN 26 (36)
T ss_dssp CCCSEECSSSSCEESSHHHHH
T ss_pred CCCCEECCCCCCCCCCHHHHH
T ss_conf 998987379998716867899
No 21
>>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} (A:1-41)
Probab=55.62 E-value=2.5 Score=22.41 Aligned_cols=21 Identities=14% Similarity=0.425 Sum_probs=17.6
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+.+-.|+.|++.|...+.|+
T Consensus 12 gekpy~C~~C~k~F~~~~~L~ 32 (41)
T 2ct1_A 12 GEKPYECYICHARFTQSGTMK 32 (41)
T ss_dssp CCCSEECTTTCCEESCHHHHH
T ss_pred CCCCEECCCCCCCCCCHHHHH
T ss_conf 988948999997324125422
No 22
>>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} (C:1-27)
Probab=53.72 E-value=3.2 Score=21.81 Aligned_cols=19 Identities=16% Similarity=0.378 Sum_probs=15.1
Q ss_pred CEEECCCCCCEEEECCCCC
Q ss_conf 8899888882136546768
Q gi|254780167|r 47 NEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 47 ~~v~C~YC~~~fv~~~~l~ 65 (78)
.+-.|+.||+.|...+.|.
T Consensus 2 kPy~C~~CgK~Fsr~~hL~ 20 (27)
T 1llm_C 2 KPFQCRICMRNFSRSDHLT 20 (27)
T ss_dssp CCEECTTTCCEESCHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHH
T ss_conf 4957999886429799999
No 23
>>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} (A:)
Probab=52.78 E-value=3.1 Score=21.89 Aligned_cols=22 Identities=23% Similarity=0.557 Sum_probs=17.7
Q ss_pred CCCEEECCC--CCCEEEECCCCCC
Q ss_conf 998899888--8821365467684
Q gi|254780167|r 45 EENEKHCPY--CSTLYHFDSSLDS 66 (78)
Q Consensus 45 ~~~~v~C~Y--C~~~fv~~~~l~~ 66 (78)
.+++-.|+| |++.|...++|+.
T Consensus 5 GekPy~C~~~~CgK~F~~~s~L~~ 28 (37)
T 1va1_A 5 KKKQHICHIQGCGKVYGKTSHLRA 28 (37)
T ss_dssp SCCCEECCSTTCCCEESCHHHHHH
T ss_pred CCCCCCCCCCCCCCEECCHHHHHH
T ss_conf 987849929898984497456330
No 24
>>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} (A:72-100)
Probab=51.64 E-value=2 Score=22.92 Aligned_cols=20 Identities=15% Similarity=0.389 Sum_probs=16.1
Q ss_pred CCEEECCCCCCEEEECCCCC
Q ss_conf 98899888882136546768
Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~ 65 (78)
+++-.|+.||+.|...+.|.
T Consensus 2 EkPy~C~~Cgk~F~~~s~L~ 21 (29)
T 2ebt_A 2 AKPFQCGVCNRSFSRSDHLA 21 (29)
T ss_dssp CCSCBCSSSCCBCSSHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHH
T ss_conf 66653477886037768999
No 25
>>2kfq_A FP1; protein, de novo protein; NMR {Synthetic} (A:)
Probab=51.57 E-value=2.7 Score=22.15 Aligned_cols=17 Identities=24% Similarity=0.651 Sum_probs=13.9
Q ss_pred ECCCCCCEEEECCCCCC
Q ss_conf 98888821365467684
Q gi|254780167|r 50 HCPYCSTLYHFDSSLDS 66 (78)
Q Consensus 50 ~C~YC~~~fv~~~~l~~ 66 (78)
.||.|+++|.....|.-
T Consensus 4 ~C~~C~KrF~RSDHL~k 20 (32)
T 2kfq_A 4 ACPACPKRFMRSDALSK 20 (32)
T ss_dssp SSSSSCTTHHHHHTTSS
T ss_pred CCCCCCCCCCCHHHHHH
T ss_conf 47645553251277888
No 26
>>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), zinc finger, DNA-binding protein; HET: DNA; 1.60A {Mus musculus} (A:59-90)
Probab=51.18 E-value=3.8 Score=21.37 Aligned_cols=20 Identities=15% Similarity=0.336 Sum_probs=16.7
Q ss_pred CCEEECCCCCCEEEECCCCC
Q ss_conf 98899888882136546768
Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~ 65 (78)
+.+-.|..|++.|...+.|.
T Consensus 2 eKPy~C~~Cgk~F~~~s~L~ 21 (32)
T 1a1h_A 2 EKPFACDICGRKFARSDERK 21 (32)
T ss_dssp CCCEECTTTCCEESSHHHHH
T ss_pred CCCCEECCCCCCCCCHHHHH
T ss_conf 77713132688507878999
No 27
>>2i13_A AART; DNA binding, zinc finger, DNA binding protein/DNA complex; 1.96A {Mus musculus} (A:74-102)
Probab=49.76 E-value=4.3 Score=21.10 Aligned_cols=20 Identities=25% Similarity=0.607 Sum_probs=16.6
Q ss_pred CCEEECCCCCCEEEECCCCC
Q ss_conf 98899888882136546768
Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~ 65 (78)
+.+-.|..|++.|...+.|.
T Consensus 2 Ekpy~C~~Cgk~F~~~s~L~ 21 (29)
T 2i13_A 2 EKPYKCPECGKSFSQRANLR 21 (29)
T ss_dssp CCCEECTTTCCEESCHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHH
T ss_conf 87855666787568889988
No 28
>>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} (A:)
Probab=49.45 E-value=1.9 Score=23.06 Aligned_cols=21 Identities=19% Similarity=0.428 Sum_probs=17.2
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+++-.|++|++.|...+.|+
T Consensus 8 gekpy~C~~Cgk~F~~~s~L~ 28 (37)
T 1p7a_A 8 GIKPFQCPDCDRSFSRSDHLA 28 (37)
T ss_dssp CSSSBCCTTTCCCBSSHHHHH
T ss_pred CCCCEECCCCCCEECCHHHHH
T ss_conf 888947899999917788889
No 29
>>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} (C:59-88)
Probab=49.22 E-value=3.6 Score=21.50 Aligned_cols=20 Identities=25% Similarity=0.695 Sum_probs=16.4
Q ss_pred CCEEECCC--CCCEEEECCCCC
Q ss_conf 98899888--882136546768
Q gi|254780167|r 46 ENEKHCPY--CSTLYHFDSSLD 65 (78)
Q Consensus 46 ~~~v~C~Y--C~~~fv~~~~l~ 65 (78)
+.+-.|+| |+++|...+.|+
T Consensus 2 ekPy~C~~~gCgk~F~~~s~L~ 23 (30)
T 1ubd_C 2 EKPFQCTFEGCGKRFSLDFNLR 23 (30)
T ss_dssp CCCEECCSTTCCCEESCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCC
T ss_conf 2211111233332212112024
No 30
>>1fqt_A Rieske-type ferredoxin of biphenyl dioxygenase; 2Fe-2S cluster, beta sandwich, oxidoreductase; 1.60A {Burkholderia xenovorans LB400} (A:16-87)
Probab=48.91 E-value=11 Score=18.81 Aligned_cols=50 Identities=8% Similarity=-0.000 Sum_probs=35.4
Q ss_pred CCEEEECCEEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCEEEEC-CCC
Q ss_conf 85199465499993789988986799995999889988888213654-676
Q gi|254780167|r 15 HSRIKIGVKKFMCAGTSPPLDHPHVFINMGEENEKHCPYCSTLYHFD-SSL 64 (78)
Q Consensus 15 ~~~I~v~~~~v~CdGg~g~lgHP~V~l~l~~~~~v~C~YC~~~fv~~-~~l 64 (78)
.-++..+.+..+.+.-=+-.|-|..+-.+..++.++|||-+.+|-++ ...
T Consensus 15 i~i~r~~g~v~a~~~~CpH~g~~l~~g~~~~~~~i~Cp~Hg~~F~l~tG~~ 65 (72)
T 1fqt_A 15 VAIFNVDGELFATQDRCTHGDWSLSDGGYLEGDVVECSLHMGKFCVRTGKV 65 (72)
T ss_dssp EEEEEETTEEEEEESBCTTSSCBSSTTCCEETTEEECTTTCCEEETTTCCE
T ss_pred EEEEEECCEEEEEECCCCCCCCEEEECCEECCCEEECCCCCCEEECCCCCC
T ss_conf 999998999999967689889788754447488788588898999998569
No 31
>>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), zinc finger, DNA-binding protein; HET: DNA; 1.60A {Mus musculus} (A:1-30)
Probab=48.30 E-value=3.4 Score=21.61 Aligned_cols=20 Identities=30% Similarity=0.625 Sum_probs=16.1
Q ss_pred CCEEECCC--CCCEEEECCCCC
Q ss_conf 98899888--882136546768
Q gi|254780167|r 46 ENEKHCPY--CSTLYHFDSSLD 65 (78)
Q Consensus 46 ~~~v~C~Y--C~~~fv~~~~l~ 65 (78)
+.+-.|+| |+++|...+.|+
T Consensus 2 EkPy~C~~~gC~k~F~~~~~L~ 23 (30)
T 1a1h_A 2 ERPYACPVESCDRRFSQSGSLT 23 (30)
T ss_dssp -CCEECCSSSCCCEESSHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHCC
T ss_conf 8888199565889949766776
No 32
>>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=48.10 E-value=4 Score=21.27 Aligned_cols=21 Identities=19% Similarity=0.343 Sum_probs=17.1
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+.+-.|+.|++.|...+.|.
T Consensus 6 gekp~~C~~C~k~F~~~s~L~ 26 (36)
T 2elq_A 6 SGKPFKCSLCEYATRSKSNLK 26 (36)
T ss_dssp CCCSEECSSSSCEESCHHHHH
T ss_pred CCCCEECCCCCCCCCCCCCHH
T ss_conf 998987689883555753500
No 33
>>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} (A:35-62)
Probab=47.88 E-value=3.8 Score=21.41 Aligned_cols=18 Identities=17% Similarity=0.431 Sum_probs=14.9
Q ss_pred EEECCCCCCEEEECCCCC
Q ss_conf 899888882136546768
Q gi|254780167|r 48 EKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 48 ~v~C~YC~~~fv~~~~l~ 65 (78)
+-.|+.|++.|.....|+
T Consensus 3 P~~C~~C~k~F~r~~~L~ 20 (28)
T 2csh_A 3 PYGCGVCGKKFKMKHHLV 20 (28)
T ss_dssp SEECTTTSCEESSSHHHH
T ss_pred CCCCCCCCCCCCCCCCCC
T ss_conf 012222322211000001
No 34
>>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:33-68)
Probab=47.45 E-value=3.7 Score=21.42 Aligned_cols=20 Identities=20% Similarity=0.577 Sum_probs=16.2
Q ss_pred CCEEECCCCCCEEEECCCCC
Q ss_conf 98899888882136546768
Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~ 65 (78)
+.+-.|++||+.|...+.|.
T Consensus 1 EKPy~C~~Cgk~F~~~s~L~ 20 (36)
T 2yt9_A 1 EKPYSCPVCGLRFKRKDRMS 20 (36)
T ss_dssp SCSEECSSSCCEESCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCC
T ss_conf 10122333322111011011
No 35
>>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:40-72)
Probab=46.55 E-value=5 Score=20.72 Aligned_cols=20 Identities=25% Similarity=0.451 Sum_probs=16.0
Q ss_pred CCEEECCCCCCEEEECCCCC
Q ss_conf 98899888882136546768
Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~ 65 (78)
+.+-.|..||+.|...+.|.
T Consensus 1 EKpy~C~~CgK~F~~~s~L~ 20 (33)
T 1x6e_A 1 EKPYKCLECGKAFSQNSGLI 20 (33)
T ss_dssp SCCEECSSSCCEESSHHHHH
T ss_pred EECEECCCCCCCCCCHHHHH
T ss_conf 00101065787308888999
No 36
>>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} (A:43-77)
Probab=44.85 E-value=5.2 Score=20.65 Aligned_cols=20 Identities=25% Similarity=0.393 Sum_probs=16.5
Q ss_pred CCEEECCCCCCEEEECCCCC
Q ss_conf 98899888882136546768
Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~ 65 (78)
+++-.|..|++.|...+.|.
T Consensus 2 EKp~~C~~Cgk~F~~~s~L~ 21 (35)
T 2cot_A 2 EKPYKCDECGKAFIQRSHLI 21 (35)
T ss_dssp SCSEECSSSCCEESSHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHH
T ss_conf 11112354675015789999
No 37
>>2gag_D Heterotetrameric sarcosine oxidase delta-subunit; flavoenzyme, electron transfer, folate- methylating enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_D* 1x31_D* 1vrq_D* (D:)
Probab=43.86 E-value=7.7 Score=19.70 Aligned_cols=19 Identities=16% Similarity=0.574 Sum_probs=13.5
Q ss_pred EEECCCCCCE----EEECCCCCC
Q ss_conf 8998888821----365467684
Q gi|254780167|r 48 EKHCPYCSTL----YHFDSSLDS 66 (78)
Q Consensus 48 ~v~C~YC~~~----fv~~~~l~~ 66 (78)
.+.|||||.| |.|.+..+.
T Consensus 3 ~I~CP~CG~Rd~~EF~ygG~A~~ 25 (99)
T 2gag_D 3 LIDCPNCGPRNENEFKYGGEAHV 25 (99)
T ss_dssp EEEETTTEEEEGGGSEEEEESSC
T ss_pred EECCCCCCCCCHHHCCCCCCCCC
T ss_conf 76599989710765357774555
No 38
>>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:1-41)
Probab=42.84 E-value=6.9 Score=19.98 Aligned_cols=21 Identities=24% Similarity=0.494 Sum_probs=17.3
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+.+-.|+.|++.|...+.|.
T Consensus 12 gekpy~C~~C~k~F~~~~~L~ 32 (41)
T 1x6h_A 12 GEKPYACSHCDKTFRQKQLLD 32 (41)
T ss_dssp CCCCEECSSSSCEESSHHHHH
T ss_pred CCCCEECCCCCCCCCCCCCCE
T ss_conf 967854898898312021210
No 39
>>1pg5_B Aspartate carbamoyltransferase regulatory chain; 2.60A {Sulfolobus acidocaldarius} (B:107-168)
Probab=41.39 E-value=21 Score=17.30 Aligned_cols=25 Identities=24% Similarity=0.503 Sum_probs=17.8
Q ss_pred CEEEEECCC-CCEEECCCCCCEEEEC
Q ss_conf 679999599-9889988888213654
Q gi|254780167|r 37 PHVFINMGE-ENEKHCPYCSTLYHFD 61 (78)
Q Consensus 37 P~V~l~l~~-~~~v~C~YC~~~fv~~ 61 (78)
+..|.-+++ +....|-||++.|..+
T Consensus 25 ~s~F~v~~~~~~~lrC~YCe~~~~~~ 50 (62)
T 1pg5_B 25 IPTFKTLTEKPLKMRCEYCETIIDEN 50 (62)
T ss_dssp CCEEEEEETTTTEEEETTTCCEEEHH
T ss_pred CCEEEEEECCCCEEEEECCCCEECHH
T ss_conf 76799982899889815799892499
No 40
>>2i13_A AART; DNA binding, zinc finger, DNA binding protein/DNA complex; 1.96A {Mus musculus} (A:158-190)
Probab=40.93 E-value=6.9 Score=19.97 Aligned_cols=20 Identities=25% Similarity=0.632 Sum_probs=16.6
Q ss_pred CCEEECCCCCCEEEECCCCC
Q ss_conf 98899888882136546768
Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~ 65 (78)
+++-.|..|++.|...+.|.
T Consensus 2 eKpy~C~~Cgk~F~~~s~L~ 21 (33)
T 2i13_A 2 EKPYKCPECGKSFSRRDALN 21 (33)
T ss_dssp CCCEECTTTCCEESSHHHHH
T ss_pred CCCEECCCCCCEECCHHHHH
T ss_conf 84807999999749999999
No 41
>>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} (A:39-72)
Probab=39.93 E-value=5.6 Score=20.45 Aligned_cols=22 Identities=18% Similarity=0.478 Sum_probs=17.4
Q ss_pred CCCEEECCC--CCCEEEECCCCCC
Q ss_conf 998899888--8821365467684
Q gi|254780167|r 45 EENEKHCPY--CSTLYHFDSSLDS 66 (78)
Q Consensus 45 ~~~~v~C~Y--C~~~fv~~~~l~~ 66 (78)
.+.+-.|+| |++.|...++|+.
T Consensus 6 gekPy~C~~~~C~k~F~~~~~L~~ 29 (34)
T 2epa_A 6 GEKPFSCSWKGCERRFARSDELSR 29 (34)
T ss_dssp SSCSEECCCTTCCCEESSHHHHHH
T ss_pred CCCCCCCCCCCCCCEEECHHHHHH
T ss_conf 120134301588988748999998
No 42
>>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} (A:1-41)
Probab=39.63 E-value=6.5 Score=20.10 Aligned_cols=21 Identities=29% Similarity=0.672 Sum_probs=16.9
Q ss_pred CCCEEECCC--CCCEEEECCCCC
Q ss_conf 998899888--882136546768
Q gi|254780167|r 45 EENEKHCPY--CSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~Y--C~~~fv~~~~l~ 65 (78)
.+.+-.|+| |++.|...+.|+
T Consensus 12 gekpy~C~~~~C~K~F~~~s~L~ 34 (41)
T 2ebt_A 12 KRRIHYCDYPGCTKVYTKSSHLK 34 (41)
T ss_dssp SCCCEECCSSSCCCEESCHHHHH
T ss_pred CCCCEECCCCCCCCEECCHHHCC
T ss_conf 97897788888997848888888
No 43
>>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} (C:89-124)
Probab=39.38 E-value=6.1 Score=20.25 Aligned_cols=21 Identities=24% Similarity=0.703 Sum_probs=17.0
Q ss_pred CCEEECCC--CCCEEEECCCCCC
Q ss_conf 98899888--8821365467684
Q gi|254780167|r 46 ENEKHCPY--CSTLYHFDSSLDS 66 (78)
Q Consensus 46 ~~~v~C~Y--C~~~fv~~~~l~~ 66 (78)
+.+-.|++ |++.|...+.|+.
T Consensus 2 ekpy~C~~~~C~K~F~~~s~L~~ 24 (36)
T 1ubd_C 2 DRPYVCPFDGCNKKFAQSTNLKS 24 (36)
T ss_dssp CCCCCCCSTTCCCCCSSTTTTHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 53332311445665579899999
No 44
>>2waq_P DNA-directed RNA polymerase RPO12 subunit; multi-subunit, transcription; 3.35A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 3hkz_P (P:)
Probab=39.14 E-value=13 Score=18.37 Aligned_cols=18 Identities=28% Similarity=0.552 Sum_probs=13.9
Q ss_pred CEEECCCCCCEEEECCCC
Q ss_conf 889988888213654676
Q gi|254780167|r 47 NEKHCPYCSTLYHFDSSL 64 (78)
Q Consensus 47 ~~v~C~YC~~~fv~~~~l 64 (78)
-.+-|||||-+-++....
T Consensus 22 p~irCPyCG~kIi~kvR~ 39 (48)
T 2waq_P 22 PGVRCPYCGYKIIFMVRK 39 (48)
T ss_dssp SSSSCTTTCCCCEECCCC
T ss_pred CCCCCCCCCCEEEEEECC
T ss_conf 886446357289998538
No 45
>>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} (A:42-71)
Probab=38.65 E-value=6.4 Score=20.14 Aligned_cols=20 Identities=20% Similarity=0.512 Sum_probs=15.9
Q ss_pred CCEEECCC--CCCEEEECCCCC
Q ss_conf 98899888--882136546768
Q gi|254780167|r 46 ENEKHCPY--CSTLYHFDSSLD 65 (78)
Q Consensus 46 ~~~v~C~Y--C~~~fv~~~~l~ 65 (78)
+.+-.|+| |+++|...++|+
T Consensus 2 ekPf~C~~~gC~K~F~~~~~L~ 23 (30)
T 2ebt_A 2 EKPYKCTWEGCDWRFARSDELT 23 (30)
T ss_dssp CCCEECCSSSCCCEESSHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHH
T ss_conf 8664232356642010266654
No 46
>>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} (A:95-132)
Probab=36.79 E-value=14 Score=18.29 Aligned_cols=22 Identities=23% Similarity=0.369 Sum_probs=17.5
Q ss_pred CCEEECCC--CCCEEEECCCCCCC
Q ss_conf 98899888--88213654676844
Q gi|254780167|r 46 ENEKHCPY--CSTLYHFDSSLDSK 67 (78)
Q Consensus 46 ~~~v~C~Y--C~~~fv~~~~l~~~ 67 (78)
+.+-.|.+ |++.|...++|+.-
T Consensus 1 Ekpy~C~~~~C~k~F~~~~~L~~H 24 (38)
T 2gli_A 1 EKPYMCEHEGCSKAFSNASDRAKH 24 (38)
T ss_dssp CCCEECCSTTCCCEESSSSTTHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 677532223322121123200121
No 47
>>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} (A:)
Probab=35.84 E-value=6.4 Score=20.13 Aligned_cols=17 Identities=24% Similarity=0.549 Sum_probs=13.7
Q ss_pred EECCCCCCEEEECCCCC
Q ss_conf 99888882136546768
Q gi|254780167|r 49 KHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 49 v~C~YC~~~fv~~~~l~ 65 (78)
-.|++|++.|...+.|.
T Consensus 3 y~C~~C~k~F~~~s~L~ 19 (33)
T 1rim_A 3 FACPECPKRFMRSDHLS 19 (33)
T ss_dssp CCCSSSCCCCSSHHHHH
T ss_pred CCCCCCCCCCCHHHHHH
T ss_conf 56877777426378899
No 48
>>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* (A:64-90)
Probab=35.36 E-value=9.2 Score=19.29 Aligned_cols=19 Identities=16% Similarity=0.415 Sum_probs=15.0
Q ss_pred CEEECCCCCCEEEECCCCC
Q ss_conf 8899888882136546768
Q gi|254780167|r 47 NEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 47 ~~v~C~YC~~~fv~~~~l~ 65 (78)
++-.|..||+.|...+.|.
T Consensus 2 KPy~C~eCgK~F~~~s~L~ 20 (27)
T 2jp9_A 2 KPFQCKTCQRKFSRSDHLK 20 (27)
T ss_dssp CCEECTTTCCEESCHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHH
T ss_conf 7652323421110344320
No 49
>>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} (A:1-42)
Probab=34.56 E-value=5.2 Score=20.65 Aligned_cols=21 Identities=24% Similarity=0.536 Sum_probs=16.9
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+.+-.|+.|++.|...+.|.
T Consensus 15 geKpy~C~~Cgk~F~~~s~L~ 35 (42)
T 2cot_A 15 ERRRYKCDECGKSFSHSSDLS 35 (42)
T ss_dssp CSCSSBCSSSCCBCSCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCC
T ss_conf 997808898997973345444
No 50
>>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} (A:1-33)
Probab=33.60 E-value=6 Score=20.30 Aligned_cols=16 Identities=25% Similarity=0.357 Sum_probs=13.5
Q ss_pred ECCCCCCEEEECCCCC
Q ss_conf 9888882136546768
Q gi|254780167|r 50 HCPYCSTLYHFDSSLD 65 (78)
Q Consensus 50 ~C~YC~~~fv~~~~l~ 65 (78)
.|++|++.|...+.|+
T Consensus 3 ~C~~C~k~F~~~s~L~ 18 (33)
T 1bbo_A 3 ICEECGIRXKKPSMLK 18 (33)
T ss_dssp BCTTTCCBCSSHHHHH
T ss_pred CCCCCCCCCCCHHHHH
T ss_conf 0697969268399999
No 51
>>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=33.49 E-value=8.2 Score=19.54 Aligned_cols=22 Identities=18% Similarity=0.369 Sum_probs=17.7
Q ss_pred CCCEEECCCCCCEEEECCCCCC
Q ss_conf 9988998888821365467684
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78)
.+++-.|+.|++.|...+.|+.
T Consensus 8 geKpy~C~~Cgk~F~~~s~L~~ 29 (42)
T 2en2_A 8 GEKPYKCETCGARFVQVAHLRA 29 (42)
T ss_dssp SSCSEECTTTCCEESSHHHHHH
T ss_pred CCCCEECCCCCCCCCCHHHHHH
T ss_conf 9989778988984278889898
No 52
>>2b1x_A Naphthalene dioxygenase large subunit; rieske non-heme iron oxygenase, oxidoreductase; 2.00A {Rhodococcus SP} (A:56-135)
Probab=33.17 E-value=24 Score=17.01 Aligned_cols=45 Identities=18% Similarity=0.141 Sum_probs=32.4
Q ss_pred EEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCEEEECCCCCCC
Q ss_conf 499993789988986799995999889988888213654676844
Q gi|254780167|r 23 KKFMCAGTSPPLDHPHVFINMGEENEKHCPYCSTLYHFDSSLDSK 67 (78)
Q Consensus 23 ~~v~CdGg~g~lgHP~V~l~l~~~~~v~C~YC~~~fv~~~~l~~~ 67 (78)
+.++-+.-=.-+|.|..+=.++..+.++|||-+-+|-++...-..
T Consensus 25 ~v~a~~n~C~H~g~~L~~g~~~~~~~i~Cp~Hg~~f~l~G~~~~~ 69 (80)
T 2b1x_A 25 EIRGHLNACRHRGMQVCRAEMGNTSHFRCPYHGWTYSNTGSLVGV 69 (80)
T ss_dssp CEEEEESSCTTTCCCSCCSSEEECSEEECTTTCCEEETTSCEEEC
T ss_pred CEEEEEEECCCCCCEECCCCCCCCCCEEECEEEEEECCCCCCCCC
T ss_conf 899998546889861004778872746704114785267774406
No 53
>>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=32.85 E-value=12 Score=18.62 Aligned_cols=21 Identities=19% Similarity=0.419 Sum_probs=17.1
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+.+-.|+.|++.|...+.|.
T Consensus 7 geKpy~C~~C~k~F~~~~~L~ 27 (41)
T 2ept_A 7 GQRVYECQECGKSFRQKGSLT 27 (41)
T ss_dssp CCCCEECSSSCCEESSHHHHH
T ss_pred CCCCEECCCCCCEECCHHHHH
T ss_conf 999977699995527988989
No 54
>>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} (G:1-45)
Probab=32.82 E-value=12 Score=18.72 Aligned_cols=21 Identities=19% Similarity=0.487 Sum_probs=16.7
Q ss_pred CCCEEECCC--CCCEEEECCCCC
Q ss_conf 998899888--882136546768
Q gi|254780167|r 45 EENEKHCPY--CSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~Y--C~~~fv~~~~l~ 65 (78)
.+.+-.|++ ||+.|...+.|.
T Consensus 16 gekpy~C~~~~Cgk~F~~~~~L~ 38 (45)
T 1f2i_G 16 KMRPYACPVESCDRRFSRSDELT 38 (45)
T ss_dssp CCCCEECSSTTBCCEESSHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 98697198777889239889999
No 55
>>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} (C:28-88)
Probab=32.71 E-value=11 Score=18.83 Aligned_cols=20 Identities=15% Similarity=0.336 Sum_probs=16.4
Q ss_pred CCEEECCCCCCEEEECCCCC
Q ss_conf 98899888882136546768
Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~ 65 (78)
+.+-.|++|++.|...++|.
T Consensus 2 ekpf~C~~C~k~F~~~~~L~ 21 (61)
T 1llm_C 2 EKPFACDICGRKFARSDERK 21 (61)
T ss_dssp CCCEECTTTCCEESSHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHH
T ss_conf 98875652543347889999
No 56
>>2yww_A Aspartate carbamoyltransferase regulatory chain; ATP complex, structural genomics, NPPSFA; HET: ATP; 2.00A {Methanocaldococcus jannaschii} (A:98-149)
Probab=32.50 E-value=23 Score=17.12 Aligned_cols=24 Identities=17% Similarity=0.288 Sum_probs=16.6
Q ss_pred EEEEECCCC-CEEECCCCCCEEEEC
Q ss_conf 799995999-889988888213654
Q gi|254780167|r 38 HVFINMGEE-NEKHCPYCSTLYHFD 61 (78)
Q Consensus 38 ~V~l~l~~~-~~v~C~YC~~~fv~~ 61 (78)
..|.-++++ ....|-||++.|..+
T Consensus 25 ~~F~~~~~~~~~lrC~YCe~~~~~~ 49 (52)
T 2yww_A 25 GKFKIESKNPLKIRCYYCEKFLNEV 49 (52)
T ss_dssp CEEEEEEETTEEEEETTTCCBCSSC
T ss_pred CEEEEECCCCCEEEEECCCCCCHHH
T ss_conf 4389960899899807899891122
No 57
>>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* (A:33-63)
Probab=31.72 E-value=9.6 Score=19.19 Aligned_cols=20 Identities=20% Similarity=0.594 Sum_probs=15.7
Q ss_pred CCEEECCC--CCCEEEECCCCC
Q ss_conf 98899888--882136546768
Q gi|254780167|r 46 ENEKHCPY--CSTLYHFDSSLD 65 (78)
Q Consensus 46 ~~~v~C~Y--C~~~fv~~~~l~ 65 (78)
+.+-.|.| |+++|...++|+
T Consensus 2 ekPy~C~~~~CgK~F~~~~~L~ 23 (31)
T 2jp9_A 2 EKPYQCDFKDCERRFSRSDQLK 23 (31)
T ss_dssp TCCEECCSTTCCCEESSHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCC
T ss_conf 5200111111111111221112
No 58
>>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=31.57 E-value=12 Score=18.59 Aligned_cols=22 Identities=23% Similarity=0.401 Sum_probs=17.8
Q ss_pred CCCEEECCCCCCEEEECCCCCC
Q ss_conf 9988998888821365467684
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78)
.+.+-.|+.|++.|...+.|..
T Consensus 9 geKp~~C~~Cgk~F~~~~~L~~ 30 (44)
T 2epv_A 9 GEKPYECNECGKAFIWKSLLIV 30 (44)
T ss_dssp CCCSEECSSSCCEESSHHHHHH
T ss_pred CCCCEECCCCCCCCCCCHHHHC
T ss_conf 9889836999808456232205
No 59
>>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:1-39)
Probab=31.43 E-value=13 Score=18.44 Aligned_cols=21 Identities=24% Similarity=0.336 Sum_probs=17.3
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+.+-.|..|++.|...+.|.
T Consensus 11 gekpy~C~~Cgk~F~~~s~L~ 31 (39)
T 1x6e_A 11 GEKPYGCVECGKAFSRSSILV 31 (39)
T ss_dssp TCCCEECSSSCCEESSHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCC
T ss_conf 986827897898044253432
No 60
>>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* (A:1-32)
Probab=31.13 E-value=5.9 Score=20.33 Aligned_cols=22 Identities=32% Similarity=0.543 Sum_probs=16.6
Q ss_pred CCCEEECCC--CCCEEEECCCCCC
Q ss_conf 998899888--8821365467684
Q gi|254780167|r 45 EENEKHCPY--CSTLYHFDSSLDS 66 (78)
Q Consensus 45 ~~~~v~C~Y--C~~~fv~~~~l~~ 66 (78)
.+.+-+|+| |++.|...+.|+.
T Consensus 3 gekpf~C~~~gC~K~F~~~~~Lk~ 26 (32)
T 2jp9_A 3 EKRPFMCAYPGCNKRYFKLSHLQM 26 (32)
T ss_dssp SSCCBCCCSTTSCCCBSCHHHHHH
T ss_pred CCCCEECCCCCCCCCCCCHHHCCC
T ss_conf 888878889997999097576721
No 61
>>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} (A:64-94)
Probab=30.28 E-value=5.4 Score=20.53 Aligned_cols=20 Identities=25% Similarity=0.619 Sum_probs=15.7
Q ss_pred CCEEECCC--CCCEEEECCCCC
Q ss_conf 98899888--882136546768
Q gi|254780167|r 46 ENEKHCPY--CSTLYHFDSSLD 65 (78)
Q Consensus 46 ~~~v~C~Y--C~~~fv~~~~l~ 65 (78)
+.+-.|.| |++.|...+.|+
T Consensus 2 ekPy~C~~~gCgk~F~~~s~L~ 23 (31)
T 2gli_A 2 EKPHKCTFEGCRKSYSRLENLK 23 (31)
T ss_dssp CCCCCCCSTTCCCCCSSHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHC
T ss_conf 1012111221100000145540
No 62
>>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=30.09 E-value=11 Score=18.87 Aligned_cols=21 Identities=19% Similarity=0.276 Sum_probs=17.4
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+.+-.|+.|++.|...+.|.
T Consensus 9 gekp~~C~~C~k~F~~~s~l~ 29 (46)
T 2enc_A 9 GEKPFKCEECGKGFYTNSQCY 29 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHH
T ss_pred CCCCEECCCCCEEECCHHHHH
T ss_conf 988981598687703417663
No 63
>>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} (A:)
Probab=29.55 E-value=14 Score=18.31 Aligned_cols=17 Identities=24% Similarity=0.594 Sum_probs=13.1
Q ss_pred EEECCCCCCEEEECCCC
Q ss_conf 89988888213654676
Q gi|254780167|r 48 EKHCPYCSTLYHFDSSL 64 (78)
Q Consensus 48 ~v~C~YC~~~fv~~~~l 64 (78)
.-+|.||+.+|-.+-++
T Consensus 13 ~~eC~lC~vKYs~r~Sv 29 (55)
T 2yrk_A 13 KPECTLCGVKYSARLSI 29 (55)
T ss_dssp CSCCTTTTCCCCSSSCH
T ss_pred CCCCCCCCEEEEEEEEH
T ss_conf 55376325142102031
No 64
>>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:34-78)
Probab=29.51 E-value=23 Score=17.15 Aligned_cols=17 Identities=18% Similarity=0.548 Sum_probs=12.2
Q ss_pred EEECCCCCCEEEECCCC
Q ss_conf 89988888213654676
Q gi|254780167|r 48 EKHCPYCSTLYHFDSSL 64 (78)
Q Consensus 48 ~v~C~YC~~~fv~~~~l 64 (78)
.-.|-+||+||--..++
T Consensus 5 ~f~Ce~CgKrFEK~dsV 21 (45)
T 2d9h_A 5 RFPCEFCGKRFEKPDSV 21 (45)
T ss_dssp CEECTTTCCEESSHHHH
T ss_pred CCCCCCCCCCCCCHHHH
T ss_conf 44100343243468999
No 65
>>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=29.38 E-value=14 Score=18.32 Aligned_cols=21 Identities=24% Similarity=0.547 Sum_probs=17.3
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+++-.|..|++.|...+.|.
T Consensus 9 geKpy~C~~C~k~F~~~~~L~ 29 (46)
T 2eml_A 9 GEKPYECSVCGKAFSHRQSLS 29 (46)
T ss_dssp SCCSEECSSSCCEESSHHHHH
T ss_pred CCCCEECCCCCCCCCCHHHHH
T ss_conf 998978898898307288977
No 66
>>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} (A:)
Probab=29.26 E-value=6.6 Score=20.08 Aligned_cols=19 Identities=16% Similarity=0.345 Sum_probs=14.9
Q ss_pred CEEECCC--CCCEEEECCCCC
Q ss_conf 8899888--882136546768
Q gi|254780167|r 47 NEKHCPY--CSTLYHFDSSLD 65 (78)
Q Consensus 47 ~~v~C~Y--C~~~fv~~~~l~ 65 (78)
.+-.|+| |+++|...+.|+
T Consensus 2 kP~~C~~~gC~K~F~~~~~L~ 22 (32)
T 1zfd_A 2 RPYSCDHPGCDKAFVRNHDLI 22 (32)
T ss_dssp CSBCCCCTTCCCCBSSSHHHH
T ss_pred CCEECCCCCCCCEECCHHHHH
T ss_conf 482695999898648777889
No 67
>>2poi_A Baculoviral IAP repeat-containing protein 4; zinc finger, signaling protein/apoptosis complex; 1.80A {Homo sapiens} PDB: 2pop_B (A:)
Probab=29.21 E-value=35 Score=16.12 Aligned_cols=20 Identities=25% Similarity=0.567 Sum_probs=16.0
Q ss_pred EEECCCCCEEECCCCCCEEE
Q ss_conf 99959998899888882136
Q gi|254780167|r 40 FINMGEENEKHCPYCSTLYH 59 (78)
Q Consensus 40 ~l~l~~~~~v~C~YC~~~fv 59 (78)
|+-.+.+..+.|.||+....
T Consensus 47 Fyytg~~D~v~C~~C~~~l~ 66 (94)
T 2poi_A 47 FLYTGEGDTVRCFSCHAAVD 66 (94)
T ss_dssp EEECSSTTCEEETTTCCEEC
T ss_pred CEECCCCCEEEECCCCCCCC
T ss_conf 08779998789486688937
No 68
>>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* (A:91-119)
Probab=29.05 E-value=11 Score=18.77 Aligned_cols=20 Identities=20% Similarity=0.471 Sum_probs=15.5
Q ss_pred CCEEECCC--CCCEEEECCCCC
Q ss_conf 98899888--882136546768
Q gi|254780167|r 46 ENEKHCPY--CSTLYHFDSSLD 65 (78)
Q Consensus 46 ~~~v~C~Y--C~~~fv~~~~l~ 65 (78)
+.+-.|+| |+++|...+.|+
T Consensus 2 ekP~~C~~~gC~k~F~r~~~L~ 23 (29)
T 2jp9_A 2 EKPFSCRWPSCQKKFARSDELV 23 (29)
T ss_dssp CCCEECCSTTCCCEESSHHHHH
T ss_pred ECCCCEECCCCCCEECCHHHHH
T ss_conf 0235246799899947989999
No 69
>>2qra_D XIAP, baculoviral IAP repeat-containing protein 4, inhibitor; apoptosis, signaling protein, zinc binding; 2.50A {Homo sapiens} (D:)
Probab=28.93 E-value=35 Score=16.08 Aligned_cols=20 Identities=25% Similarity=0.567 Sum_probs=16.3
Q ss_pred EEECCCCCEEECCCCCCEEE
Q ss_conf 99959998899888882136
Q gi|254780167|r 40 FINMGEENEKHCPYCSTLYH 59 (78)
Q Consensus 40 ~l~l~~~~~v~C~YC~~~fv 59 (78)
|+-.+....+.|-||+..+.
T Consensus 64 Fyy~g~~D~v~C~~C~~~l~ 83 (111)
T 2qra_D 64 FLYTGEGDTVRCFSCHAAVD 83 (111)
T ss_dssp EEECSSTTCEEETTTCCEEC
T ss_pred EEEECCCCEEEECCCCCEEE
T ss_conf 69808999789743598960
No 70
>>2air_B Aspartate carbamoyltransferase regulatory chain; aspartate transcarbamylase, alanosine, carbamyl phosphate, T-state; HET: AL0; 2.00A {Escherichia coli} (B:94-153)
Probab=28.52 E-value=45 Score=15.50 Aligned_cols=24 Identities=17% Similarity=0.510 Sum_probs=15.8
Q ss_pred EEEEECCC-CC-EEECCCCCCEEEEC
Q ss_conf 79999599-98-89988888213654
Q gi|254780167|r 38 HVFINMGE-EN-EKHCPYCSTLYHFD 61 (78)
Q Consensus 38 ~V~l~l~~-~~-~v~C~YC~~~fv~~ 61 (78)
..|.-+++ +. ...|-||++.|..+
T Consensus 30 s~F~v~~~~~~~~lrC~YCe~~~~~~ 55 (60)
T 2air_B 30 SSFAVRKRANDIALKCKYCEKEFSHN 55 (60)
T ss_dssp CEEEEEECSSCEEEEETTTCCEEEHH
T ss_pred CEEEEEECCCCCEEEEECCCCCCCCC
T ss_conf 45999974898389947889791426
No 71
>>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=28.10 E-value=15 Score=18.07 Aligned_cols=21 Identities=24% Similarity=0.588 Sum_probs=17.3
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+.+-.|+.|++.|...+.|.
T Consensus 9 gekp~~C~~Cgk~F~~~~~L~ 29 (46)
T 2eme_A 9 GEKPYVCDYCGKAFGLSAELV 29 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHH
T ss_pred CCCCEECCCCCCEECCHHHHH
T ss_conf 968978999998517888977
No 72
>>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} (A:1-38)
Probab=27.97 E-value=9 Score=19.34 Aligned_cols=21 Identities=14% Similarity=0.464 Sum_probs=16.9
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+.+-.|..|++.|...+.|.
T Consensus 5 geKpy~C~~Cgk~F~~~s~L~ 25 (38)
T 2dmd_A 5 SSGPHKCEVCGKCFSRKDKLK 25 (38)
T ss_dssp CCCCCCBTTTTBCCCCHHHHH
T ss_pred CCCCEECCCCCCCCCCHHHCC
T ss_conf 993986899999808555505
No 73
>>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} (A:131-166)
Probab=27.94 E-value=5.9 Score=20.35 Aligned_cols=20 Identities=25% Similarity=0.600 Sum_probs=15.6
Q ss_pred CCEEECCC--CCCEEEECCCCC
Q ss_conf 98899888--882136546768
Q gi|254780167|r 46 ENEKHCPY--CSTLYHFDSSLD 65 (78)
Q Consensus 46 ~~~v~C~Y--C~~~fv~~~~l~ 65 (78)
+.+-.|+| |+++|...++|+
T Consensus 2 Ekpf~C~~~gC~k~F~~~~~L~ 23 (36)
T 1tf6_A 2 QLPYECPHEGCDKRFSLPSRLK 23 (36)
T ss_dssp SCSSBCCSSSCCCBCSSHHHHH
T ss_pred CCCCCCCCCCCCCCEECCCCCC
T ss_conf 5763112344564101155734
No 74
>>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=27.57 E-value=18 Score=17.66 Aligned_cols=22 Identities=23% Similarity=0.440 Sum_probs=17.9
Q ss_pred CCCEEECCCCCCEEEECCCCCC
Q ss_conf 9988998888821365467684
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78)
.+.+-.|..|++.|...+.|..
T Consensus 9 gekp~~C~~Cgk~F~~~~~L~~ 30 (44)
T 2yu5_A 9 GENPFKCSKCDRVFTQRNYLVQ 30 (44)
T ss_dssp CCCSEECSSSSCEESSSHHHHH
T ss_pred CCCCEECCCCCCCCCCHHHHHH
T ss_conf 9979717988872057689888
No 75
>>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} (A:)
Probab=27.21 E-value=26 Score=16.80 Aligned_cols=13 Identities=15% Similarity=0.754 Sum_probs=10.8
Q ss_pred CEEECCCCCCEEE
Q ss_conf 8899888882136
Q gi|254780167|r 47 NEKHCPYCSTLYH 59 (78)
Q Consensus 47 ~~v~C~YC~~~fv 59 (78)
..-+|.+|++.|.
T Consensus 5 k~~~C~~C~k~F~ 17 (39)
T 1njq_A 5 RSYTCSFCKREFR 17 (39)
T ss_dssp SSEECTTTCCEES
T ss_pred CCEECCCCCCCCC
T ss_conf 7608799889857
No 76
>>2j6a_A Protein TRM112; translation termination, methyltransferase, transferase, ERF1, nuclear protein, protein methylation; 1.7A {Saccharomyces cerevisiae} (A:)
Probab=26.94 E-value=32 Score=16.33 Aligned_cols=19 Identities=26% Similarity=0.681 Sum_probs=15.4
Q ss_pred CCCEEECCCCCCEEEECCC
Q ss_conf 9988998888821365467
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSS 63 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~ 63 (78)
.+|.-+||=||+.|-.+.+
T Consensus 106 ~EG~LvCp~cgr~fpI~~G 124 (141)
T 2j6a_A 106 AEGEMKCRNCGHIYYIKNG 124 (141)
T ss_dssp EEEEEECTTTCCEEEEETT
T ss_pred EECEEECCCCCCCCCCCCC
T ss_conf 5246887999988213268
No 77
>>2i3h_A Baculoviral IAP repeat-containing protein 7; zinc binding, peptide complex, apoptosis inhibition, peptidomimetic, small molecule, drug design, inhibitor/apoptosis complex; HET: BTB; 1.62A {Homo sapiens} (A:)
Probab=26.85 E-value=45 Score=15.53 Aligned_cols=21 Identities=19% Similarity=0.554 Sum_probs=16.5
Q ss_pred EEECCCCCEEECCCCCCEEEE
Q ss_conf 999599988998888821365
Q gi|254780167|r 40 FINMGEENEKHCPYCSTLYHF 60 (78)
Q Consensus 40 ~l~l~~~~~v~C~YC~~~fv~ 60 (78)
|+-.+.+..+.|-||+..+.-
T Consensus 74 Fyytg~~d~v~C~~C~~~l~~ 94 (133)
T 2i3h_A 74 FFHTGHQDKVRCFFCYGGLQS 94 (133)
T ss_dssp EEECSSTTCEEETTTCCEEEC
T ss_pred CEECCCCCEEEECCCCCCCCC
T ss_conf 788699998997357889278
No 78
>>2be7_D Aspartate carbamoyltransferase regulatory chain; atcase, psychrophilic, cold adaptation, allosteric, holoenzyme; 2.85A {Moritella profunda} (D:99-153)
Probab=26.83 E-value=30 Score=16.49 Aligned_cols=24 Identities=25% Similarity=0.490 Sum_probs=15.0
Q ss_pred EEEECCCC-C-EEECCCCCCEEEECC
Q ss_conf 99995999-8-899888882136546
Q gi|254780167|r 39 VFINMGEE-N-EKHCPYCSTLYHFDS 62 (78)
Q Consensus 39 V~l~l~~~-~-~v~C~YC~~~fv~~~ 62 (78)
.|.-++++ . ..-|-||++.|..+.
T Consensus 25 ~F~v~~~~~~~~lrC~YCe~~~~~~~ 50 (55)
T 2be7_D 25 SFSIKKTKGNIGLKCKYCEKTFSKDI 50 (55)
T ss_dssp CEEEEEETTEEEEEETTTCCEEEHHH
T ss_pred EEEEEECCCCCEEEEECCCCCCCHHH
T ss_conf 39999448997899168997925767
No 79
>>3hl5_A Baculoviral IAP repeat-containing protein 4; BIR, apoptosis, small molecule drug discovery, structure-based drug design, cytoplasm, ligase; HET: 9JZ; 1.80A {Homo sapiens} PDB: 1nw9_A 2vsl_A (A:)
Probab=26.44 E-value=39 Score=15.87 Aligned_cols=20 Identities=25% Similarity=0.536 Sum_probs=16.0
Q ss_pred EEECCCCCEEECCCCCCEEE
Q ss_conf 99959998899888882136
Q gi|254780167|r 40 FINMGEENEKHCPYCSTLYH 59 (78)
Q Consensus 40 ~l~l~~~~~v~C~YC~~~fv 59 (78)
|+-.+....+.|-||+....
T Consensus 38 Fyytg~~D~v~C~~C~~~l~ 57 (95)
T 3hl5_A 38 FYALGEGDKVKCFHCGGGLT 57 (95)
T ss_dssp EEECSSTTCEEETTTCCEEC
T ss_pred CEECCCCCEEEECCCCCCCC
T ss_conf 87859999889662588914
No 80
>>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} (A:)
Probab=26.29 E-value=11 Score=18.81 Aligned_cols=17 Identities=29% Similarity=0.518 Sum_probs=13.3
Q ss_pred EECCCCCCEEEECCCCC
Q ss_conf 99888882136546768
Q gi|254780167|r 49 KHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 49 v~C~YC~~~fv~~~~l~ 65 (78)
-.|+||.-|+.-.++|+
T Consensus 3 Y~Cq~C~~r~adssnLK 19 (30)
T 1klr_A 3 YQCQYCEFRSADSSNLK 19 (30)
T ss_dssp CCCSSSSCCCSCSHHHH
T ss_pred CCCCCCCCCCCCCHHHH
T ss_conf 20441300136622345
No 81
>>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=26.24 E-value=7.9 Score=19.63 Aligned_cols=22 Identities=27% Similarity=0.492 Sum_probs=17.5
Q ss_pred CCCEEECCCCCCEEEECCCCCC
Q ss_conf 9988998888821365467684
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78)
.+.+-.|..|++.|...+.|+.
T Consensus 8 gekpy~C~~Cgk~F~~~s~L~~ 29 (42)
T 2eos_A 8 GEKPYPCEICGTRFRHLQTLKS 29 (42)
T ss_dssp SSCCBCCSSSCCCBSSHHHHHH
T ss_pred CCCCEECCCCCCCCCCHHHHHH
T ss_conf 9989868988981478788788
No 82
>>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=25.97 E-value=17 Score=17.77 Aligned_cols=21 Identities=24% Similarity=0.529 Sum_probs=17.4
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+++-.|+.|++.|...+.|.
T Consensus 9 gekpy~C~~C~k~F~~~~~l~ 29 (46)
T 2en8_A 9 GEKSHTCDECGKNFCYISALR 29 (46)
T ss_dssp CCSSEECTTTCCEESSHHHHH
T ss_pred CCCCEECCCCCCCCCCHHHHH
T ss_conf 988947891898565378876
No 83
>>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=25.73 E-value=18 Score=17.75 Aligned_cols=21 Identities=29% Similarity=0.449 Sum_probs=17.3
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+.+-.|..|++.|...+.|.
T Consensus 9 gekpy~C~~Cgk~F~~~s~L~ 29 (46)
T 2em8_A 9 GEKPYKCVECGKGYKRRLDLD 29 (46)
T ss_dssp SCCSEECSSSCCEESSHHHHH
T ss_pred CCCCEECCCCCEEEECCCCCC
T ss_conf 988838898997712155534
No 84
>>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=25.72 E-value=14 Score=18.27 Aligned_cols=21 Identities=19% Similarity=0.537 Sum_probs=17.3
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+.+-.|..|++.|...+.|.
T Consensus 9 gekpy~C~~Cgk~F~~~~~l~ 29 (46)
T 2eoz_A 9 GEKPYSCNVCGKAFVLSAHLN 29 (46)
T ss_dssp SCCSEEETTTTEEESSHHHHH
T ss_pred CCCCEECCCCCCEECCHHHHH
T ss_conf 988837799994623378899
No 85
>>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} (A:)
Probab=25.68 E-value=18 Score=17.74 Aligned_cols=21 Identities=24% Similarity=0.460 Sum_probs=17.1
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+.+-.|..|++.|...+.|.
T Consensus 7 gekpy~C~~Cgk~F~~~s~L~ 27 (42)
T 2el5_A 7 GENPYECSECGKAFNRKDQLI 27 (42)
T ss_dssp SCCSEECSSSCCEESSHHHHH
T ss_pred CCCCEECCCCCCEECCHHHHH
T ss_conf 997987898898517657867
No 86
>>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics, NPPSFA; HET: PLP; 2.40A {Archaeoglobus fulgidus} (A:19-42,A:228-269)
Probab=25.61 E-value=22 Score=17.17 Aligned_cols=30 Identities=20% Similarity=0.531 Sum_probs=23.6
Q ss_pred CCCEEECCCCCCEEEECCCCCCCCCCCCCC
Q ss_conf 998899888882136546768444688002
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDSKETLPVGC 74 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~~es~P~~c 74 (78)
.|+..+|-||.+.|+-....+-.|-.=-+|
T Consensus 15 gDGYSvCD~C~~V~rts~~f~~KEvelLGC 44 (66)
T 2e7j_A 15 GDGYSVCDFCEIVLRRSEKYKNKEVELLGC 44 (66)
T ss_dssp ----------TTTTCBCSSCTTSBGGGTTC
T ss_pred HCCCCHHHCCHHHHHCCCCCCCCCCCCCCC
T ss_conf 437640002398873156555653223330
No 87
>>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} (A:)
Probab=25.57 E-value=20 Score=17.49 Aligned_cols=18 Identities=11% Similarity=0.331 Sum_probs=14.6
Q ss_pred CCEEECCCCCCEEEECCC
Q ss_conf 988998888821365467
Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSS 63 (78)
Q Consensus 46 ~~~v~C~YC~~~fv~~~~ 63 (78)
+..+.|.||.+.|.+.+.
T Consensus 27 ~~~a~C~~C~k~ls~~~g 44 (73)
T 2ct5_A 27 WKKIYCRICMAQIAYSGN 44 (73)
T ss_dssp SSCCEETTTTEECCCCSS
T ss_pred CCEEECCCCCCEEECCCC
T ss_conf 885782488934766888
No 88
>>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=25.53 E-value=22 Score=17.26 Aligned_cols=22 Identities=18% Similarity=0.394 Sum_probs=17.7
Q ss_pred CCCEEECCCCCCEEEECCCCCC
Q ss_conf 9988998888821365467684
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78)
.+++-.|..|++.|...+.|..
T Consensus 9 geKp~~C~~Cgk~F~~~~~l~~ 30 (46)
T 2eoy_A 9 KEKCFKCNKCEKTFSCSKYLTQ 30 (46)
T ss_dssp CSCCEECSSSCCEESSSHHHHH
T ss_pred CCCCEECCCCCCCCCCHHHHHH
T ss_conf 9879668984998364677777
No 89
>>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=25.50 E-value=15 Score=18.12 Aligned_cols=22 Identities=14% Similarity=0.439 Sum_probs=17.8
Q ss_pred CCCEEECCCCCCEEEECCCCCC
Q ss_conf 9988998888821365467684
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78)
.+.+-.|..|++.|...+.|+.
T Consensus 9 g~kpf~C~~C~k~F~~~~~L~~ 30 (44)
T 2emb_A 9 TRKRYECSKCQATFNLRKHLIQ 30 (44)
T ss_dssp CCSSEECTTTCCEESCHHHHHH
T ss_pred CCCCEECCCCCCCCCCHHHHHH
T ss_conf 9879438989885531589996
No 90
>>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} (A:)
Probab=25.44 E-value=19 Score=17.62 Aligned_cols=22 Identities=18% Similarity=0.375 Sum_probs=17.9
Q ss_pred CCCEEECCCCCCEEEECCCCCC
Q ss_conf 9988998888821365467684
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78)
.+++-.|..|++.|...+.|..
T Consensus 9 gekp~~C~~Cgk~F~~~s~L~~ 30 (46)
T 2el4_A 9 GVKPYGCSQCAKTFSLKSQLIV 30 (46)
T ss_dssp CCCSEECSSSSCEESSHHHHHH
T ss_pred CCCCEECCCCCEECCCHHHHHH
T ss_conf 9888576999965274256323
No 91
>>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=25.36 E-value=19 Score=17.54 Aligned_cols=21 Identities=24% Similarity=0.482 Sum_probs=17.1
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+.+-.|..|++.|...+.|.
T Consensus 9 gekp~~C~~Cgk~F~~~s~L~ 29 (46)
T 2yso_A 9 REKSHQCRECGEIFFQYVSLI 29 (46)
T ss_dssp CCCCEECTTTCCEESSHHHHH
T ss_pred CCCCEECCCCCCCCCCCHHHH
T ss_conf 996957899899844417777
No 92
>>1z01_A 2-OXO-1,2-dihydroquinoline 8-monooxygenase, oxygenase component; rieske center, oxygen binding/activation, substrate bound complex; 1.80A {Pseudomonas putida} (A:1-174)
Probab=25.16 E-value=50 Score=15.24 Aligned_cols=21 Identities=10% Similarity=0.248 Sum_probs=16.9
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
..+.++|||.+-+|-++....
T Consensus 99 ~~~~i~Cp~Hg~~f~~~g~~~ 119 (174)
T 1z01_A 99 TKSTISCWYHGFTFDLETGKL 119 (174)
T ss_dssp STTEEECTTTCEEEETTTCBE
T ss_pred CCCEEECCCCCCEEECCCCCE
T ss_conf 599797388886896689856
No 93
>>2vm5_A Baculoviral IAP repeat-containing protein 1; baculoviral inhibitor of apoptosis repeat-containing 1, BIR2, BIRC1, apoptosis, polymorphism; 1.80A {Homo sapiens} (A:)
Probab=24.70 E-value=52 Score=15.18 Aligned_cols=20 Identities=20% Similarity=0.521 Sum_probs=16.2
Q ss_pred EEECCCCCEEECCCCCCEEE
Q ss_conf 99959998899888882136
Q gi|254780167|r 40 FINMGEENEKHCPYCSTLYH 59 (78)
Q Consensus 40 ~l~l~~~~~v~C~YC~~~fv 59 (78)
|+-.+....+.|.||+....
T Consensus 48 Fyytg~~D~v~C~~C~~~l~ 67 (106)
T 2vm5_A 48 FVFTGKQDTVQCFSCGGCLG 67 (106)
T ss_dssp EEECSSTTCEEETTTCCEEE
T ss_pred CEECCCCCEEEEEECCCEEC
T ss_conf 86889998789700688934
No 94
>>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} (A:63-110)
Probab=24.58 E-value=19 Score=17.59 Aligned_cols=18 Identities=17% Similarity=0.571 Sum_probs=14.5
Q ss_pred CEEECCCCCCEEEECCCC
Q ss_conf 889988888213654676
Q gi|254780167|r 47 NEKHCPYCSTLYHFDSSL 64 (78)
Q Consensus 47 ~~v~C~YC~~~fv~~~~l 64 (78)
++-+|--|+++|..+.++
T Consensus 2 KPYeC~~CgKkfMWRDSF 19 (48)
T 2csh_A 2 KPYECNICAKRFMWRDSF 19 (48)
T ss_dssp CCEECSSSCCEESCHHHH
T ss_pred EEECCCCCCCEECCHHHH
T ss_conf 120124477402588999
No 95
>>2de6_A Terminal oxygenase component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Janthinobacterium} (A:1-147)
Probab=24.58 E-value=56 Score=15.00 Aligned_cols=32 Identities=9% Similarity=0.061 Sum_probs=20.2
Q ss_pred CCCCCCEEEEECC-CCCEEECCCCCCEEEECCC
Q ss_conf 9889867999959-9988998888821365467
Q gi|254780167|r 32 PPLDHPHVFINMG-EENEKHCPYCSTLYHFDSS 63 (78)
Q Consensus 32 g~lgHP~V~l~l~-~~~~v~C~YC~~~fv~~~~ 63 (78)
+-.|.|..+=.+. ..+.++|||.+-+|-++..
T Consensus 70 pH~g~~L~~g~~~~~~~~i~Cp~H~~~f~l~tG 102 (147)
T 2de6_A 70 LHRGVQLSVKVECKTKSTITCWYHAWTYRWEDG 102 (147)
T ss_dssp TTTCCCGGGGCCCCSTTEEECTTTCEEEETTTC
T ss_pred CCCCCEEECCCCCCCCCEEECCCCCEEEECCCC
T ss_conf 899988556732277996787978859953544
No 96
>>2nyk_A M157; LY49, NK cells, viral protein; HET: NAG FUC; 2.10A {Murid herpesvirus 1} (A:1-166)
Probab=23.94 E-value=58 Score=14.93 Aligned_cols=22 Identities=27% Similarity=0.702 Sum_probs=19.7
Q ss_pred CCCEEEEECCCCCEEECCCCCC
Q ss_conf 9867999959998899888882
Q gi|254780167|r 35 DHPHVFINMGEENEKHCPYCST 56 (78)
Q Consensus 35 gHP~V~l~l~~~~~v~C~YC~~ 56 (78)
|.|.|--+.|+.++.+|.-|--
T Consensus 44 grpvvvwd~gdk~pkickicp~ 65 (166)
T 2nyk_A 44 GRPVVVWDVGDRDPKICKICPD 65 (166)
T ss_dssp CSEEEEEEC--CCCEECTTSCC
T ss_pred CEEEEEEECCCCCCCCCCCCCC
T ss_conf 8048999657888730157997
No 97
>>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A (A:)
Probab=23.89 E-value=21 Score=17.34 Aligned_cols=21 Identities=24% Similarity=0.400 Sum_probs=17.3
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+++-.|.-|++.|...+.|.
T Consensus 8 gekpy~C~~Cgk~F~~~s~L~ 28 (42)
T 2epc_A 8 GETPYLCGQCGKSFTQRGSLA 28 (42)
T ss_dssp SSCCEECSSSCCEESSHHHHH
T ss_pred CCCCEEECCCCCCCCCHHHHH
T ss_conf 998957489996334356764
No 98
>>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=23.71 E-value=24 Score=17.03 Aligned_cols=21 Identities=24% Similarity=0.531 Sum_probs=17.4
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+++-.|..|++.|...+.|.
T Consensus 9 gekpy~C~~Cgk~F~~~s~L~ 29 (46)
T 2yu8_A 9 GEKPYKCNECGKVFTQNSHLA 29 (46)
T ss_dssp CCSSEECSSSCCEESSSHHHH
T ss_pred CCCCEECCCCCCEECCHHHHH
T ss_conf 998958899898307788989
No 99
>>1jd5_A DIAP1, apoptosis 1 inhibitor; IAP, caspase activation; 1.90A {Drosophila melanogaster} (A:1-75)
Probab=23.58 E-value=56 Score=15.00 Aligned_cols=20 Identities=20% Similarity=0.373 Sum_probs=15.6
Q ss_pred EEECCCCCEEECCCCCCEEE
Q ss_conf 99959998899888882136
Q gi|254780167|r 40 FINMGEENEKHCPYCSTLYH 59 (78)
Q Consensus 40 ~l~l~~~~~v~C~YC~~~fv 59 (78)
|+=.+.+..+.|-||+....
T Consensus 52 fyytg~~D~v~Cf~C~~~l~ 71 (75)
T 1jd5_A 52 FFYTGVGDRVRCFSCGGGLM 71 (75)
T ss_dssp EEECSSTTCEEETTTCCEEE
T ss_pred CEECCCCCEEEECCCCCEEC
T ss_conf 88869999789576588905
No 100
>>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} (A:)
Probab=23.32 E-value=12 Score=18.69 Aligned_cols=18 Identities=17% Similarity=0.526 Sum_probs=14.0
Q ss_pred EECCC--CCCEEEECCCCCC
Q ss_conf 99888--8821365467684
Q gi|254780167|r 49 KHCPY--CSTLYHFDSSLDS 66 (78)
Q Consensus 49 v~C~Y--C~~~fv~~~~l~~ 66 (78)
-.|+| |++.|...+.|+.
T Consensus 3 y~C~~~gC~k~F~~~~~L~~ 22 (31)
T 1sp2_A 3 FMCTWSYCGKRFTRSDELQR 22 (31)
T ss_dssp CBCCSTTCCCBCSSHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHH
T ss_conf 89909977927287678677
No 101
>>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=23.32 E-value=59 Score=14.86 Aligned_cols=21 Identities=19% Similarity=0.581 Sum_probs=12.7
Q ss_pred CCEEECCCCCCEEEECCCCCC
Q ss_conf 988998888821365467684
Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLDS 66 (78)
Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~~ 66 (78)
+++-.|..|++.|...+.|..
T Consensus 16 ekp~~C~~C~k~f~~~s~l~~ 36 (73)
T 2ctu_A 16 DRSQKCSKCGIIFIRRSTLSR 36 (73)
T ss_dssp CSEEECSSSCCEEECCCCCCC
T ss_pred CCEECCCCCCEEECCCCCCCC
T ss_conf 851032322100000121033
No 102
>>3d9t_A Baculoviral IAP repeat-containing protein 2; zinc finger, apoptosis, cytoplasm, metal-binding, polymorphism, zinc, zinc-finger, alternative splicing, hydrolase, protease; 1.50A {Homo sapiens} (A:)
Probab=23.10 E-value=58 Score=14.91 Aligned_cols=20 Identities=20% Similarity=0.542 Sum_probs=16.4
Q ss_pred EEECCCCCEEECCCCCCEEE
Q ss_conf 99959998899888882136
Q gi|254780167|r 40 FINMGEENEKHCPYCSTLYH 59 (78)
Q Consensus 40 ~l~l~~~~~v~C~YC~~~fv 59 (78)
|+-.+.+..+.|-||+....
T Consensus 40 Fyytg~~d~v~C~~C~~~l~ 59 (97)
T 3d9t_A 40 FYYVGRNDDVKCFCCDGGLR 59 (97)
T ss_dssp EEECSSTTCEEETTTCCEEE
T ss_pred CEECCCCCEEEECCCCCEEC
T ss_conf 77879999789585888914
No 103
>>1se0_A Apoptosis 1 inhibitor; apoptosis, IAP, BIR, caspase; 1.75A {Drosophila melanogaster} (A:)
Probab=22.76 E-value=59 Score=14.85 Aligned_cols=20 Identities=10% Similarity=0.287 Sum_probs=16.0
Q ss_pred EEECCCCCEEECCCCCCEEE
Q ss_conf 99959998899888882136
Q gi|254780167|r 40 FINMGEENEKHCPYCSTLYH 59 (78)
Q Consensus 40 ~l~l~~~~~v~C~YC~~~fv 59 (78)
|+-.+....+.|-||+....
T Consensus 40 Fyytg~~d~v~Cf~C~~~l~ 59 (116)
T 1se0_A 40 MYFTHAGDKVKCFFCGVEIG 59 (116)
T ss_dssp EEECSSTTCEEETTTCCEEE
T ss_pred CEECCCCCEEEECCCCCEEC
T ss_conf 86759998589471788922
No 104
>>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} (A:)
Probab=22.59 E-value=23 Score=17.06 Aligned_cols=22 Identities=18% Similarity=0.427 Sum_probs=17.4
Q ss_pred CCCEEECCC--CCCEEEECCCCCC
Q ss_conf 998899888--8821365467684
Q gi|254780167|r 45 EENEKHCPY--CSTLYHFDSSLDS 66 (78)
Q Consensus 45 ~~~~v~C~Y--C~~~fv~~~~l~~ 66 (78)
.+++-.|.+ |++.|...+.|..
T Consensus 9 gekpy~C~~~~Cgk~F~~~s~L~~ 32 (48)
T 2ent_A 9 GEKPFACTWPGCGWRFSRSDELSR 32 (48)
T ss_dssp CCCCEECCSSSCCCEESSHHHHHH
T ss_pred CCCCEECCCCCCCCCCCCCCCCCC
T ss_conf 996958888898971577667377
No 105
>>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=22.32 E-value=22 Score=17.18 Aligned_cols=21 Identities=24% Similarity=0.365 Sum_probs=17.2
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+++-.|..|++.|...+.|.
T Consensus 9 gekpy~C~~C~k~F~~~s~L~ 29 (46)
T 2emh_A 9 GERPYICTVCGKAFTDRSNLI 29 (46)
T ss_dssp CCCSEECTTTCCEESSHHHHH
T ss_pred CCCCEECCCCCCCCCCHHHHH
T ss_conf 998978998998414078888
No 106
>>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=21.79 E-value=25 Score=16.90 Aligned_cols=21 Identities=24% Similarity=0.371 Sum_probs=17.1
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+.+-.|..|++.|...+.|.
T Consensus 7 gekpy~C~~Cgk~F~~~s~L~ 27 (44)
T 2emx_A 7 GEKPFGCSCCEKAFSSKSYLL 27 (44)
T ss_dssp SCCCEECSSSSCEESSHHHHH
T ss_pred CCCCEECCCCCCEECCHHHHH
T ss_conf 998987899898716528888
No 107
>>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} (A:)
Probab=21.65 E-value=20 Score=17.47 Aligned_cols=22 Identities=18% Similarity=0.243 Sum_probs=17.7
Q ss_pred CCCEEECCCCCCEEEECCCCCC
Q ss_conf 9988998888821365467684
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78)
.+++-.|..|++.|...+.|+.
T Consensus 9 gekpy~C~~C~k~F~~~s~L~~ 30 (46)
T 2el6_A 9 GVNPYKCSQCEKSFSGKLRLLV 30 (46)
T ss_dssp CCCSEECSSSSCEESSHHHHHH
T ss_pred CCCCEECCCCCCEECCHHHHHH
T ss_conf 9889789999968486778677
No 108
>>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=21.59 E-value=24 Score=17.04 Aligned_cols=22 Identities=23% Similarity=0.386 Sum_probs=17.9
Q ss_pred CCCEEECCCCCCEEEECCCCCC
Q ss_conf 9988998888821365467684
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78)
.+++-.|..|++.|...+.|..
T Consensus 9 gekpy~C~~Cgk~F~~~s~L~~ 30 (46)
T 2yts_A 9 GEKPYICNECGKSFIQKSHLNR 30 (46)
T ss_dssp SCCSEECSSSCCEESSHHHHHH
T ss_pred CCCCEECCCCCCCCCCHHHHHH
T ss_conf 9989588989984277889898
No 109
>>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} (A:1-26)
Probab=21.33 E-value=12 Score=18.65 Aligned_cols=18 Identities=17% Similarity=0.418 Sum_probs=14.0
Q ss_pred EECCCCCCEEEECCCCCC
Q ss_conf 998888821365467684
Q gi|254780167|r 49 KHCPYCSTLYHFDSSLDS 66 (78)
Q Consensus 49 v~C~YC~~~fv~~~~l~~ 66 (78)
-+|+.|++-|+....|+-
T Consensus 3 ~~C~~CtR~FaR~EHLkR 20 (26)
T 2adr_A 3 FVCEVCTRAFARQEHLKR 20 (26)
T ss_dssp BCCTTTCCCBSCHHHHHH
T ss_pred CCCCCCCCEECCHHHCCE
T ss_conf 778999898088878875
No 110
>>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=21.29 E-value=25 Score=16.89 Aligned_cols=21 Identities=24% Similarity=0.376 Sum_probs=17.2
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+++-.|..|++.|...+.|.
T Consensus 9 gekpy~C~~Cgk~F~~~s~L~ 29 (46)
T 2emy_A 9 GENPYECHECGKAFSRKYQLI 29 (46)
T ss_dssp SSCCEECSSSCCEESSHHHHH
T ss_pred CCCCCCCCCCCEECCCCCCCC
T ss_conf 988809898994231055435
No 111
>>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=21.23 E-value=28 Score=16.62 Aligned_cols=21 Identities=24% Similarity=0.450 Sum_probs=17.4
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+++-.|..|++.|...+.|.
T Consensus 9 gekpy~C~~Cgk~F~~~s~L~ 29 (46)
T 2en3_A 9 GEKPFQCKECGMNFSWSCSLF 29 (46)
T ss_dssp CCCSEECSSSCCEESSSHHHH
T ss_pred CCCCEECCCCCCCCCCHHHHH
T ss_conf 998958999998456677878
No 112
>>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} (A:)
Probab=21.02 E-value=26 Score=16.84 Aligned_cols=22 Identities=14% Similarity=0.277 Sum_probs=17.0
Q ss_pred CCCEEECCCCCCEEEECCCCCC
Q ss_conf 9988998888821365467684
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78)
.+.+-.|..|++.|...++|..
T Consensus 9 ~ekpy~C~~C~K~F~~~s~L~~ 30 (54)
T 2eps_A 9 VGKPYICQSCGKGFSRPDHLNG 30 (54)
T ss_dssp SSCCEECSSSCCEESSHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9978368998989776653535
No 113
>>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=20.94 E-value=26 Score=16.84 Aligned_cols=21 Identities=24% Similarity=0.504 Sum_probs=17.2
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+++-.|..|++.|...+.|.
T Consensus 9 gekpy~C~~Cgk~F~~~s~L~ 29 (46)
T 2emj_A 9 GEKPFECAECGKSFSISSQLA 29 (46)
T ss_dssp CCCSEECSSSSCEESSHHHHH
T ss_pred CCCCEECCCCCCCCCCHHHHH
T ss_conf 967948998898355488999
No 114
>>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=20.83 E-value=29 Score=16.55 Aligned_cols=21 Identities=24% Similarity=0.495 Sum_probs=17.3
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+.+-.|+.|++.|...+.|.
T Consensus 9 gekpy~C~~Cgk~F~~~s~l~ 29 (46)
T 2epw_A 9 GEKPCKCTECGKAFCWKSQLI 29 (46)
T ss_dssp CCCSEECSSSCCEESSSHHHH
T ss_pred CCCCEECCCCCEECCCHHHHH
T ss_conf 998958499982414668877
No 115
>>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=20.66 E-value=25 Score=16.88 Aligned_cols=22 Identities=14% Similarity=0.309 Sum_probs=17.9
Q ss_pred CCCEEECCCCCCEEEECCCCCC
Q ss_conf 9988998888821365467684
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78)
.+.+-.|..|++.|...+.|..
T Consensus 9 gekpy~C~~Cgk~F~~~~~L~~ 30 (44)
T 2eox_A 9 DSKSYNCNECGKAFTRIFHLTR 30 (44)
T ss_dssp CCCCEEETTTTEEESSSHHHHT
T ss_pred CCCCCCCCCCCCEECCHHHHHH
T ss_conf 9858118998884387578777
No 116
>>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=20.48 E-value=14 Score=18.33 Aligned_cols=21 Identities=19% Similarity=0.449 Sum_probs=16.8
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+.+-.|.+|++.|...+.|.
T Consensus 9 gekp~~C~~C~k~F~~~s~L~ 29 (46)
T 2eom_A 9 GERGHRCSDCGKFFLQASNFI 29 (46)
T ss_dssp CCSSCCCSSSCCCCSSHHHHH
T ss_pred CCCCEECCCCCCCCCCCCCCC
T ss_conf 958829999998875664553
No 117
>>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} (A:)
Probab=20.14 E-value=26 Score=16.77 Aligned_cols=21 Identities=19% Similarity=0.531 Sum_probs=17.3
Q ss_pred CCCEEECCCCCCEEEECCCCC
Q ss_conf 998899888882136546768
Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78)
Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78)
.+.+-.|.-|++.|...+.|.
T Consensus 9 gekp~~C~~C~k~F~~~s~L~ 29 (46)
T 2em5_A 9 STKSHQCHECGRGFTLKSHLN 29 (46)
T ss_dssp CSCSEECSSSCCEESSHHHHH
T ss_pred CCCCEECCCCCCCCCCHHHHH
T ss_conf 996458499988888756815
Done!