Query         gi|254780167|ref|YP_003064580.1| hypothetical protein CLIBASIA_00250 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 78
No_of_seqs    101 out of 207
Neff          3.6 
Searched_HMMs 23785
Date          Sun May 22 21:18:35 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780167.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2jz8_A Uncharacterized protein 100.0 2.6E-35 1.1E-39  212.7   7.0   77    1-77      1-77  (87)
  2 2jvm_A Uncharacterized protein  99.8 2.6E-20 1.1E-24  130.7   6.2   55   13-67     17-72  (80)
  3 2jrr_A Uncharacterized protein  99.8 6.3E-20 2.6E-24  128.6   6.0   55   13-67      4-59  (67)
  4 1v54_F VI, cytochrome C oxidas  95.8  0.0091 3.8E-07   34.9   4.5   45   16-62     45-93  (98)
  5 2odx_A Cytochrome C oxidase po  95.5   0.016 6.5E-07   33.6   4.6   42   21-63     30-71  (80)
  6 3na7_A HP0958; flagellar bioge  77.6    0.94   4E-05   23.9   2.0   55   14-71    190-245 (256)
  7 3iuf_A Zinc finger protein UBI  75.1    0.47   2E-05   25.5  -0.0   23   43-65      2-24  (48)
  8 2elp_A Zinc finger protein 406  68.6     1.1 4.8E-05   23.4   0.7   16   47-62      8-23  (37)
  9 2els_A Zinc finger protein 406  65.8     1.1 4.8E-05   23.4   0.2   21   46-66      7-27  (36)
 10 1vzy_A 33 kDa chaperonin; chap  61.2     3.1 0.00013   21.0   1.8   15   48-62    265-279 (291)
 11 1vq0_A 33 kDa chaperonin; TM13  61.0     3.3 0.00014   20.9   1.9   16   47-62    271-286 (302)
 12 1ncs_A Peptide M30F, transcrip  58.7     1.5 6.3E-05   22.7  -0.2   24   43-66     13-38  (47)
 13 1i7f_A Heat shock protein 33;   55.8       2 8.2E-05   22.1   0.0   17   47-63    259-275 (292)
 14 1va1_A Transcription factor SP  55.6     1.5 6.2E-05   22.8  -0.7   22   44-65      4-27  (37)
 15 1ard_A Yeast transcription fac  52.2     1.3 5.4E-05   23.1  -1.4   18   48-65      2-19  (29)
 16 2kfq_A FP1; protein, de novo p  46.4     2.6 0.00011   21.4  -0.6   17   50-66      4-20  (32)
 17 1f2i_G Fusion of N-terminal 17  46.2     3.2 0.00013   20.9  -0.2   49   17-65     12-66  (73)
 18 2ept_A Zinc finger protein 32;  41.0     4.3 0.00018   20.2  -0.2   22   45-66      7-28  (41)
 19 1p7a_A BF3, BKLF, kruppel-like  40.5     2.2 9.3E-05   21.8  -1.7   21   45-65      8-28  (37)
 20 2eof_A Zinc finger protein 268  39.7     4.3 0.00018   20.2  -0.3   21   45-65      9-29  (44)
 21 2gag_D Heterotetrameric sarcos  39.7     6.9 0.00029   19.1   0.7   18   48-65      3-24  (99)
 22 2emb_A Zinc finger protein 473  39.0     5.6 0.00024   19.6   0.2   21   45-65      9-29  (44)
 23 2emm_A ZFP-95, zinc finger pro  37.7       6 0.00025   19.5   0.2   22   45-66      9-30  (46)
 24 2en2_A B-cell lymphoma 6 prote  37.4     4.4 0.00019   20.2  -0.6   22   45-66      8-29  (42)
 25 2en8_A Zinc finger protein 224  37.1     6.1 0.00026   19.4   0.1   21   45-65      9-29  (46)
 26 1pg5_B Aspartate carbamoyltran  36.8      19 0.00082   16.7   2.6   24   38-61    132-156 (168)
 27 2elq_A Zinc finger protein 406  35.1     7.3 0.00031   19.0   0.2   21   45-65      6-26  (36)
 28 2air_B Aspartate carbamoyltran  34.8      22 0.00091   16.4   2.6   26   36-61    122-148 (153)
 29 2eos_A B-cell lymphoma 6 prote  34.7     3.1 0.00013   21.0  -1.7   21   46-66      9-29  (42)
 30 2ep2_A Zinc finger protein 484  34.6     7.2  0.0003   19.0   0.2   21   45-65      9-29  (46)
 31 2yso_A ZFP-95, zinc finger pro  34.4     7.6 0.00032   18.9   0.2   21   45-65      9-29  (46)
 32 2ene_A Zinc finger protein 347  34.2     5.9 0.00025   19.5  -0.3   22   45-66      9-30  (46)
 33 3gce_A Ferredoxin component of  33.9      20 0.00084   16.6   2.3   49   15-63     35-84  (121)
 34 2ep3_A Zinc finger protein 484  33.8     7.6 0.00032   18.9   0.2   21   45-65      9-29  (46)
 35 2epw_A Zinc finger protein 268  33.7     8.6 0.00036   18.6   0.4   21   45-65      9-29  (46)
 36 2en1_A Zinc finger protein 224  33.7     6.1 0.00026   19.4  -0.3   21   45-65      9-29  (46)
 37 2emx_A Zinc finger protein 268  33.4     8.2 0.00034   18.7   0.3   21   45-65      7-27  (44)
 38 2eq0_A Zinc finger protein 347  33.0     6.7 0.00028   19.2  -0.2   21   45-65      9-29  (46)
 39 2ytk_A Zinc finger protein 347  32.5     7.5 0.00031   18.9  -0.1   21   45-65      9-29  (46)
 40 2ytj_A Zinc finger protein 484  32.2     8.2 0.00034   18.7   0.1   21   45-65      9-29  (46)
 41 2eps_A POZ-, at HOOK-, and zin  32.0     7.5 0.00031   18.9  -0.1   21   45-65      9-29  (54)
 42 3mv2_A Coatomer subunit alpha;  31.9      20 0.00086   16.5   2.1   16   46-61    285-300 (325)
 43 2el6_A Zinc finger protein 268  31.6     8.7 0.00037   18.6   0.2   21   45-65      9-29  (46)
 44 2yu8_A Zinc finger protein 347  31.6     9.9 0.00042   18.3   0.5   21   45-65      9-29  (46)
 45 2el4_A Zinc finger protein 268  31.5     8.8 0.00037   18.5   0.2   22   45-66      9-30  (46)
 46 2emh_A Zinc finger protein 484  31.5     8.5 0.00036   18.6   0.1   21   45-65      9-29  (46)
 47 1zfd_A SWI5; DNA binding motif  31.4       4 0.00017   20.4  -1.6   19   47-65      2-22  (32)
 48 2em3_A Zinc finger protein 28   31.4     8.6 0.00036   18.6   0.1   21   45-65      9-29  (46)
 49 1x6e_A Zinc finger protein 24;  31.4     7.5 0.00032   18.9  -0.2   18   47-64     13-30  (72)
 50 2ema_A Zinc finger protein 347  31.3     9.1 0.00038   18.5   0.2   21   45-65      9-29  (46)
 51 2eoo_A ZFP-95, zinc finger pro  31.3     9.4  0.0004   18.4   0.3   21   45-65      9-29  (46)
 52 2ytg_A ZFP-95, zinc finger pro  31.1     9.6  0.0004   18.3   0.3   21   45-65      9-29  (46)
 53 2wbt_A B-129; zinc finger; 2.7  31.0     6.1 0.00026   19.4  -0.7   17   48-64     74-90  (129)
 54 2be7_D Aspartate carbamoyltran  30.9      16 0.00068   17.1   1.4   26   36-61    121-147 (153)
 55 2ytp_A Zinc finger protein 484  30.9     9.7 0.00041   18.3   0.3   22   45-66      9-30  (46)
 56 2waq_P DNA-directed RNA polyme  30.8      14  0.0006   17.4   1.1   15   48-62     23-37  (48)
 57 2epc_A Zinc finger protein 32;  30.7     8.9 0.00038   18.5   0.1   21   45-65      8-28  (42)
 58 1rik_A E6APC1 peptide; E6-bind  30.6     9.5  0.0004   18.4   0.2   17   49-65      3-19  (29)
 59 2emf_A Zinc finger protein 484  30.3     9.8 0.00041   18.3   0.3   21   45-65      9-29  (46)
 60 2ep0_A Zinc finger protein 28   30.3     7.5 0.00032   18.9  -0.3   21   45-65      9-29  (46)
 61 2emj_A Zinc finger protein 28   30.3     9.5  0.0004   18.4   0.2   21   45-65      9-29  (46)
 62 2enc_A Zinc finger protein 224  30.1     9.5  0.0004   18.4   0.2   21   45-65      9-29  (46)
 63 2yu5_A Zinc finger protein 473  30.1      11 0.00046   18.0   0.5   21   45-65      9-29  (44)
 64 2yte_A Zinc finger protein 473  30.1     4.8  0.0002   20.0  -1.4   21   45-65      7-27  (42)
 65 2kn9_A Rubredoxin; metalloprot  30.0      27  0.0011   15.9   2.5   31   43-75     22-53  (81)
 66 2eml_A Zinc finger protein 28   29.8     9.4  0.0004   18.4   0.1   21   45-65      9-29  (46)
 67 2en6_A Zinc finger protein 268  29.5     7.7 0.00032   18.9  -0.4   21   45-65      9-29  (46)
 68 2yto_A Zinc finger protein 484  29.3     8.4 0.00035   18.7  -0.2   21   45-65      9-29  (46)
 69 2elt_A Zinc finger protein 406  29.3      10 0.00042   18.2   0.2   21   45-65      6-26  (36)
 70 2eoy_A Zinc finger protein 473  29.2      12  0.0005   17.8   0.5   21   45-65      9-29  (46)
 71 2en3_A ZFP-95, zinc finger pro  29.1      11 0.00048   17.9   0.4   21   45-65      9-29  (46)
 72 2el5_A Zinc finger protein 268  28.9     7.8 0.00033   18.8  -0.5   21   45-65      7-27  (42)
 73 2j6a_A Protein TRM112; transla  28.8      20 0.00083   16.6   1.6   19   45-63    106-124 (141)
 74 2emp_A Zinc finger protein 347  28.7      11 0.00045   18.1   0.2   21   45-65      9-29  (46)
 75 1fqt_A Rieske-type ferredoxin   28.0      27  0.0011   15.9   2.2   46   18-63     33-78  (112)
 76 1jd5_A DIAP1, apoptosis 1 inhi  27.7      30  0.0012   15.7   2.3   20   40-59     52-71  (124)
 77 2yrj_A Zinc finger protein 473  27.7      12  0.0005   17.8   0.3   21   45-65      9-29  (46)
 78 2ent_A Krueppel-like factor 15  27.5     9.5  0.0004   18.4  -0.2   21   45-65      9-31  (48)
 79 2epv_A Zinc finger protein 268  27.2     9.3 0.00039   18.4  -0.3   21   45-65      9-29  (44)
 80 2drp_A Protein (tramtrack DNA-  27.2      11 0.00046   18.1   0.0   18   47-64     39-56  (66)
 81 2eme_A Zinc finger protein 473  27.1      11 0.00048   17.9   0.2   21   45-65      9-29  (46)
 82 2ctu_A Zinc finger protein 483  27.1      35  0.0015   15.3   2.9   20   46-65     16-35  (73)
 83 2i3h_A Baculoviral IAP repeat-  27.1      31  0.0013   15.6   2.3   20   40-59     74-93  (133)
 84 2adr_A ADR1; transcription reg  27.0      11 0.00045   18.1  -0.0   20   46-65     28-47  (60)
 85 1rim_A E6APC2 peptide; E6-bind  26.9     7.9 0.00033   18.8  -0.7   15   50-64      4-18  (33)
 86 2ytb_A Zinc finger protein 32;  26.8     4.8  0.0002   20.0  -1.8   21   46-66      9-29  (42)
 87 2em4_A Zinc finger protein 28   26.4      12  0.0005   17.8   0.1   21   45-65      9-29  (46)
 88 2em8_A Zinc finger protein 224  26.2      12  0.0005   17.8   0.1   21   45-65      9-29  (46)
 89 2enz_A NPKC-theta, protein kin  26.0      29  0.0012   15.7   2.0   31   28-58      3-33  (65)
 90 2epu_A Zinc finger protein 32;  25.8       8 0.00034   18.8  -0.9   22   45-66      9-30  (45)
 91 2yrk_A Zinc finger homeobox pr  25.7      13 0.00053   17.7   0.1   17   48-64     13-29  (55)
 92 1dx8_A Rubredoxin; electron tr  25.6      30  0.0013   15.7   2.0   29   46-76      5-34  (70)
 93 2emz_A ZFP-95, zinc finger pro  25.4     6.7 0.00028   19.2  -1.3   21   45-65      9-29  (46)
 94 2qra_D XIAP, baculoviral IAP r  25.3      32  0.0013   15.5   2.1   20   40-59     64-83  (111)
 95 2em7_A Zinc finger protein 224  24.8      14 0.00058   17.5   0.2   21   45-65      9-29  (46)
 96 2eow_A Zinc finger protein 347  24.4      14 0.00061   17.4   0.3   21   45-65      9-29  (46)
 97 2ely_A Zinc finger protein 224  24.0     8.6 0.00036   18.6  -1.0   22   45-66      9-30  (46)
 98 2ghf_A ZHX1, zinc fingers and   24.0      15 0.00063   17.3   0.2   17   48-64     50-66  (102)
 99 2eor_A Zinc finger protein 224  23.7      14 0.00059   17.4   0.1   22   45-66      9-30  (46)
100 2epx_A Zinc finger protein 28   23.7     8.1 0.00034   18.8  -1.2   21   45-65      9-29  (47)
101 2emy_A Zinc finger protein 268  23.7      15 0.00062   17.3   0.2   21   45-65      9-29  (46)
102 1njq_A Superman protein; zinc-  23.6      24 0.00099   16.2   1.2   14   47-60      5-18  (39)
103 2epr_A POZ-, at HOOK-, and zin  23.4     9.7 0.00041   18.3  -0.8   22   45-66      9-30  (48)
104 2en7_A Zinc finger protein 268  23.3     6.5 0.00027   19.3  -1.7   21   45-65      9-29  (44)
105 2em2_A Zinc finger protein 28   23.2      15 0.00063   17.3   0.2   20   46-65     10-29  (46)
106 2ytf_A Zinc finger protein 268  23.2      12 0.00052   17.8  -0.3   21   45-65      9-29  (46)
107 2ytd_A Zinc finger protein 473  23.0      15 0.00065   17.2   0.2   21   45-65      9-29  (46)
108 2kvf_A Zinc finger and BTB dom  22.9      21 0.00088   16.5   0.8   16   48-63      3-18  (28)
109 2eod_A TNF receptor-associated  22.8      33  0.0014   15.4   1.8   21   46-66      8-28  (66)
110 2poi_A Baculoviral IAP repeat-  22.8      38  0.0016   15.1   2.1   19   41-59     48-66  (94)
111 3m1d_A Baculoviral IAP repeat-  22.6      38  0.0016   15.1   2.1   20   40-59     38-57  (85)
112 1vd4_A Transcription initiatio  22.6      26  0.0011   16.0   1.3   19   46-64     37-55  (62)
113 2yts_A Zinc finger protein 484  22.5      15 0.00065   17.2   0.1   22   45-66      9-30  (46)
114 2enh_A Zinc finger protein 28   22.5       9 0.00038   18.5  -1.1   20   46-65     10-29  (46)
115 2emi_A Zinc finger protein 484  22.5      17  0.0007   17.0   0.2   21   45-65      9-29  (46)
116 2em0_A Zinc finger protein 224  22.5     7.1  0.0003   19.1  -1.6   21   45-65      9-29  (46)
117 4rxn_A Rubredoxin; electron tr  22.5      29  0.0012   15.7   1.5   24   49-74      4-28  (54)
118 2emg_A Zinc finger protein 484  22.4     8.4 0.00036   18.6  -1.3   20   46-65     10-29  (46)
119 2em9_A Zinc finger protein 224  22.3      16 0.00068   17.1   0.2   22   45-66      9-30  (46)
120 2vm5_A Baculoviral IAP repeat-  22.2      43  0.0018   14.8   2.3   20   40-59     48-67  (106)
121 2v3b_B Rubredoxin 2, rubredoxi  22.1      28  0.0012   15.8   1.4   25   48-74      3-28  (55)
122 2gqj_A Zinc finger protein KIA  22.0     9.3 0.00039   18.4  -1.1   16   43-58     19-34  (98)
123 2eoe_A Zinc finger protein 347  21.9     8.5 0.00036   18.6  -1.3   21   45-65      9-29  (46)
124 2yth_A Zinc finger protein 224  21.7       7  0.0003   19.1  -1.8   22   45-66      9-30  (46)
125 3mkr_B Coatomer subunit alpha;  21.4      30  0.0013   15.6   1.4   15   46-60    276-290 (320)
126 2eox_A Zinc finger protein 473  21.4      17 0.00071   17.0   0.1   21   45-65      9-29  (44)
127 2eq4_A Zinc finger protein 224  21.3     7.8 0.00033   18.9  -1.7   21   45-65      9-29  (46)
128 2d9k_A FLN29 gene product; zin  21.2      27  0.0011   15.9   1.1   14   47-60     42-55  (75)
129 2em5_A ZFP-95, zinc finger pro  21.1      15 0.00064   17.2  -0.2   19   47-65     11-29  (46)
130 2eoz_A Zinc finger protein 473  20.9      11 0.00048   17.9  -0.9   21   45-65      9-29  (46)
131 1yk4_A Rubredoxin, RD; electro  20.8      34  0.0014   15.4   1.5   25   49-75      3-28  (52)
132 2eop_A Zinc finger protein 268  20.8     9.7 0.00041   18.3  -1.2   21   45-65      9-29  (46)
133 1x5w_A Zinc finger protein 64,  20.6      15 0.00062   17.3  -0.3   19   46-64     35-53  (70)
134 3hl5_A Baculoviral IAP repeat-  20.4      45  0.0019   14.7   2.1   20   40-59     38-57  (95)
135 2vy4_A U11/U12 small nuclear r  20.3      37  0.0016   15.1   1.7   22   44-65      1-22  (37)
136 2d9h_A Zinc finger protein 692  20.2      15 0.00064   17.2  -0.3   17   48-64     38-54  (78)
137 2em6_A Zinc finger protein 224  20.1      11 0.00044   18.1  -1.2   20   46-65     10-29  (46)
138 2ep1_A Zinc finger protein 484  20.1     8.6 0.00036   18.6  -1.6   20   46-65     10-29  (46)

No 1  
>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str}
Probab=100.00  E-value=2.6e-35  Score=212.69  Aligned_cols=77  Identities=60%  Similarity=1.158  Sum_probs=76.1

Q ss_pred             CCCCCCCCEECCCCCCEEEECCEEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCEEEECCCCCCCCCCCCCCEEE
Q ss_conf             97557864112479851994654999937899889867999959998899888882136546768444688002461
Q gi|254780167|r    1 MVDHPIPHFQNDRGHSRIKIGVKKFMCAGTSPPLDHPHVFINMGEENEKHCPYCSTLYHFDSSLDSKETLPVGCLLS   77 (78)
Q Consensus         1 Ma~~~~P~f~nd~g~~~I~v~~~~v~CdGg~g~lgHP~V~l~l~~~~~v~C~YC~~~fv~~~~l~~~es~P~~c~~~   77 (78)
                      ||++.+|||+||.|+++|+|++++|+||||++|||||+|||+|+++++++|||||++|+|+++++++||+|++|+|.
T Consensus         1 ma~~~~P~f~nd~gv~~I~V~~~~v~CdGg~~~lgHP~Vyl~~~~~~~v~CpYC~~~fv~~~~l~~~ea~P~~c~~~   77 (87)
T 2jz8_A            1 MADYNIPHFQNDLGYKIIEIGVKEFMCVGATQPFDHPHIFIDMGSTDEKICPYCSTLYRYDPSLSYNQTNPTGCLYN   77 (87)
T ss_dssp             CCSSCCCCBCCSSCCSEEECSCSEEECCCSSCSSSSSSCEEECTTCCEECCTTTCCEEECCTTSCTTCCCSSCCBCC
T ss_pred             CCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCEEEECCCCCCCCCCCCCCEEC
T ss_conf             98766864116689873897984999749999999998978869999798889998888377777676489765722


No 2  
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=99.80  E-value=2.6e-20  Score=130.72  Aligned_cols=55  Identities=25%  Similarity=0.523  Sum_probs=48.8

Q ss_pred             CCCCEEEECCEEEEEECCCCCCCCCEEEEECCCC-CEEECCCCCCEEEECCCCCCC
Q ss_conf             7985199465499993789988986799995999-889988888213654676844
Q gi|254780167|r   13 RGHSRIKIGVKKFMCAGTSPPLDHPHVFINMGEE-NEKHCPYCSTLYHFDSSLDSK   67 (78)
Q Consensus        13 ~g~~~I~v~~~~v~CdGg~g~lgHP~V~l~l~~~-~~v~C~YC~~~fv~~~~l~~~   67 (78)
                      ...|+|.|++++|+||||+++||||+|||+|+++ ++++|+|||++|+++..+++.
T Consensus        17 ~~peii~V~~~~VaCdGg~g~lGHP~Vyl~l~~~~~~v~C~YC~~~fv~k~~a~~~   72 (80)
T 2jvm_A           17 EAPETVVVSTWKVACDGGEGALGHPRVWLSIPHETGFVECGYCDRRYIHESFAAAK   72 (80)
T ss_dssp             SCCSEEEESCSEEEECCCSTTCCCCCEEEECCTTTCEEECSSSSCEEEEHHHHSCC
T ss_pred             CCCCEEEECCCEEEEECCCCCCCCCEEEEECCCCCCEEECCCCCCEEECHHHHHHH
T ss_conf             89982897588999739899899988938757999869888998866704456555


No 3  
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=99.79  E-value=6.3e-20  Score=128.64  Aligned_cols=55  Identities=24%  Similarity=0.556  Sum_probs=48.7

Q ss_pred             CCCCEEEECCEEEEEECCCCCCCCCEEEEECCCC-CEEECCCCCCEEEECCCCCCC
Q ss_conf             7985199465499993789988986799995999-889988888213654676844
Q gi|254780167|r   13 RGHSRIKIGVKKFMCAGTSPPLDHPHVFINMGEE-NEKHCPYCSTLYHFDSSLDSK   67 (78)
Q Consensus        13 ~g~~~I~v~~~~v~CdGg~g~lgHP~V~l~l~~~-~~v~C~YC~~~fv~~~~l~~~   67 (78)
                      ...|+|.|++++|+||||+++||||+|||+|+++ ++++|||||++|+++++.+.+
T Consensus         4 ~a~Eii~v~~~~V~CdGg~g~lgHP~Vyl~l~~~~~~v~CpYC~~~fv~k~~~~d~   59 (67)
T 2jrr_A            4 QAPETKIVDKSRVACDGGEGALGHPRVWLQIPEDTGWVECPYCDCKYVLKGSKADA   59 (67)
T ss_dssp             CCCEEEEESSSEEEEEESSTTSEEEEEEEECCTTTSEEEETTTTEEEEETTSGGGC
T ss_pred             CCCCEEEECCCEEEECCCCCCCCCCEEEEECCCCCCEEECCCCCCEEEECCCCCCC
T ss_conf             89857999072999689999899998989856999869898898798987886676


No 4  
>1v54_F VI, cytochrome C oxidase polypeptide VB; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: g.41.5.3 PDB: 1oco_F* 1occ_F* 1ocz_F* 1ocr_F* 1v55_F* 2dyr_F* 2dys_F* 2eij_F* 2eik_F* 2eil_F* 2eim_F* 2ein_F* 2occ_F* 2zxw_F* 3abk_F* 3abl_F* 3abm_F* 3ag1_F* 3ag2_F* 3ag3_F* ...
Probab=95.84  E-value=0.0091  Score=34.86  Aligned_cols=45  Identities=13%  Similarity=0.327  Sum_probs=36.9

Q ss_pred             CEEEE----CCEEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCEEEECC
Q ss_conf             51994----654999937899889867999959998899888882136546
Q gi|254780167|r   16 SRIKI----GVKKFMCAGTSPPLDHPHVFINMGEENEKHCPYCSTLYHFDS   62 (78)
Q Consensus        16 ~~I~v----~~~~v~CdGg~g~lgHP~V~l~l~~~~~v~C~YC~~~fv~~~   62 (78)
                      .+|.|    +.|.|-|.|  ++-.|..+|+.+.++....|+.||.-|++..
T Consensus        45 ~P~lVpS~~d~RiVGC~~--~~D~h~v~W~~l~~g~p~RC~eCG~~fkL~~   93 (98)
T 1v54_F           45 DPNLVPSITNKRIVGCIC--EEDNSTVIWFWLHKGEAQRCPSCGTHYKLVP   93 (98)
T ss_dssp             SCEEEECSSSEEEEEECC--STTCSCCEEEEEESSSCEECTTTCCEEEEEC
T ss_pred             CCCEECCCCCCEEEEECC--CCCCCEEEEEEEECCCCCCCCCCCCEEEEEE
T ss_conf             985804779863886516--8877534889986799634587785899865


No 5  
>2odx_A Cytochrome C oxidase polypeptide IV; all beta-protein, metallo-protein, oxidoreductase; NMR {Saccharomyces cerevisiae}
Probab=95.47  E-value=0.016  Score=33.60  Aligned_cols=42  Identities=17%  Similarity=0.468  Sum_probs=36.2

Q ss_pred             CCEEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCEEEECCC
Q ss_conf             6549999378998898679999599988998888821365467
Q gi|254780167|r   21 GVKKFMCAGTSPPLDHPHVFINMGEENEKHCPYCSTLYHFDSS   63 (78)
Q Consensus        21 ~~~~v~CdGg~g~lgHP~V~l~l~~~~~v~C~YC~~~fv~~~~   63 (78)
                      +.|.|-|.|. ++-.|-.+|+.|.++....|+=||.-|+++--
T Consensus        30 ~~RiVGC~g~-~~dsh~v~W~~l~~g~~~RC~eCG~~fkL~~v   71 (80)
T 2odx_A           30 DYRYVGCTGS-PAGSHTIMWLKPTVNEVARCWECGSVYKLNPV   71 (80)
T ss_dssp             SSCCEEESSS-TTCCSCCEEECCCTTCEEECSSSCCEEEECCC
T ss_pred             CCEEEEEECC-CCCCCEEEEEEECCCCCCCCCCCCCEEEEEEE
T ss_conf             9779877578-88874668999607984235668869999880


No 6  
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=77.56  E-value=0.94  Score=23.86  Aligned_cols=55  Identities=20%  Similarity=0.468  Sum_probs=32.7

Q ss_pred             CCCEEEECCEEEEEECCCCCCCCCEEEEECC-CCCEEECCCCCCEEEECCCCCCCCCCC
Q ss_conf             9851994654999937899889867999959-998899888882136546768444688
Q gi|254780167|r   14 GHSRIKIGVKKFMCAGTSPPLDHPHVFINMG-EENEKHCPYCSTLYHFDSSLDSKETLP   71 (78)
Q Consensus        14 g~~~I~v~~~~v~CdGg~g~lgHP~V~l~l~-~~~~v~C~YC~~~fv~~~~l~~~es~P   71 (78)
                      |..++.|...  .|-|=+-.+ -|.+|..+- .++.+.||+|||.-++..........|
T Consensus       190 ~~av~~v~~~--~C~gC~~~l-~~~~~~~~~~~~~i~~C~~CgRiL~~~~~~~~~~~~~  245 (256)
T 3na7_A          190 NTSIVTIKKQ--ACGGCFIRL-NDKIYTEVLTSGDMITCPYCGRILYAEGAYESNAQPP  245 (256)
T ss_dssp             GGSEEECBTT--BCTTTCCBC-CHHHHHHHHHSSSCEECTTTCCEEECSCC--------
T ss_pred             CCEEEEEECC--CCCCCCCCC-CHHHHHHHHCCCCEEECCCCCCEEEECCCCCCCCCCC
T ss_conf             9748973599--168878243-8999999885999048989997785066343345993


No 7  
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, apoptosis, cytoplasm, metal-binding, nucleus, phosphoprotein, transcription; 1.80A {Homo sapiens}
Probab=75.08  E-value=0.47  Score=25.49  Aligned_cols=23  Identities=17%  Similarity=0.419  Sum_probs=18.8

Q ss_pred             CCCCCEEECCCCCCEEEECCCCC
Q ss_conf             59998899888882136546768
Q gi|254780167|r   43 MGEENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        43 l~~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      ++++++-.|+.|++||+-...|+
T Consensus         2 ~~~~Kp~~C~vC~krYKn~nGL~   24 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLS   24 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHH
T ss_pred             CCCCCCCCCCHHHHHHCCCCCCH
T ss_conf             86677610612435542787620


No 8  
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.65  E-value=1.1  Score=23.42  Aligned_cols=16  Identities=25%  Similarity=0.818  Sum_probs=12.4

Q ss_pred             CEEECCCCCCEEEECC
Q ss_conf             8899888882136546
Q gi|254780167|r   47 NEKHCPYCSTLYHFDS   62 (78)
Q Consensus        47 ~~v~C~YC~~~fv~~~   62 (78)
                      .-.-||||+..|.-+.
T Consensus         8 RA~KCPyCd~~F~kng   23 (37)
T 2elp_A            8 RAMKCPYCDFYFMKNG   23 (37)
T ss_dssp             CCEECSSSSCEECSSC
T ss_pred             CCCCCCCHHHHHHHCC
T ss_conf             6314870168885056


No 9  
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.81  E-value=1.1  Score=23.41  Aligned_cols=21  Identities=29%  Similarity=0.762  Sum_probs=16.8

Q ss_pred             CCEEECCCCCCEEEECCCCCC
Q ss_conf             988998888821365467684
Q gi|254780167|r   46 ENEKHCPYCSTLYHFDSSLDS   66 (78)
Q Consensus        46 ~~~v~C~YC~~~fv~~~~l~~   66 (78)
                      .+.-.|-||+++|+++.+|.+
T Consensus         7 ~k~FsCe~C~k~FKfkhsL~~   27 (36)
T 2els_A            7 GKIFTCEYCNKVFKFKHSLQA   27 (36)
T ss_dssp             CCCEECTTTCCEESSHHHHHH
T ss_pred             CCEEEHHHHHHHHHHHHHHHH
T ss_conf             754645887789989899999


No 10 
>1vzy_A 33 kDa chaperonin; chaperone, heat shock protein, crystal engineering, molecular chaperone, redox-active center, PSI; 1.97A {Bacillus subtilis} SCOP: d.193.1.1 g.81.1.1
Probab=61.16  E-value=3.1  Score=21.03  Aligned_cols=15  Identities=33%  Similarity=0.886  Sum_probs=12.0

Q ss_pred             EEECCCCCCEEEECC
Q ss_conf             899888882136546
Q gi|254780167|r   48 EKHCPYCSTLYHFDS   62 (78)
Q Consensus        48 ~v~C~YC~~~fv~~~   62 (78)
                      ++.|.||++.|.++.
T Consensus       265 ev~CeFC~~~Y~f~~  279 (291)
T 1vzy_A          265 EAVCHFCNEKYLFTK  279 (291)
T ss_dssp             EEECTTTCCEEEEEH
T ss_pred             EEEEECCCCEEEECH
T ss_conf             999768799898899


No 11 
>1vq0_A 33 kDa chaperonin; TM1394, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: UNL; 2.20A {Thermotoga maritima} SCOP: d.193.1.1 g.81.1.1
Probab=61.02  E-value=3.3  Score=20.86  Aligned_cols=16  Identities=38%  Similarity=0.864  Sum_probs=13.1

Q ss_pred             CEEECCCCCCEEEECC
Q ss_conf             8899888882136546
Q gi|254780167|r   47 NEKHCPYCSTLYHFDS   62 (78)
Q Consensus        47 ~~v~C~YC~~~fv~~~   62 (78)
                      -.+.|.||+++|.++.
T Consensus       271 iev~CeFC~~~Y~f~~  286 (302)
T 1vq0_A          271 GEVVCKWCNTRYVFSE  286 (302)
T ss_dssp             EEEECTTTCCEEEECH
T ss_pred             EEEEEECCCCEEEECH
T ss_conf             4999989899798699


No 12 
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=58.72  E-value=1.5  Score=22.74  Aligned_cols=24  Identities=13%  Similarity=0.369  Sum_probs=19.2

Q ss_pred             CCCCCEEECCC--CCCEEEECCCCCC
Q ss_conf             59998899888--8821365467684
Q gi|254780167|r   43 MGEENEKHCPY--CSTLYHFDSSLDS   66 (78)
Q Consensus        43 l~~~~~v~C~Y--C~~~fv~~~~l~~   66 (78)
                      -..+++-.|+|  |++.|...+.|+.
T Consensus        13 h~~ekp~~C~~~~C~K~F~r~~~L~~   38 (47)
T 1ncs_A           13 EMPDKTFECLFPGCTKTFKRRYNIRS   38 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHH
T ss_pred             CCCCCCEECCCCCCCCCCCCHHHHHH
T ss_conf             47897958888899998575356664


No 13 
>1i7f_A Heat shock protein 33; HSP33, redox sensitive molecular chaperone; 2.70A {Escherichia coli} SCOP: d.193.1.1 PDB: 1xjh_A
Probab=55.85  E-value=2  Score=22.11  Aligned_cols=17  Identities=35%  Similarity=0.948  Sum_probs=14.3

Q ss_pred             CEEECCCCCCEEEECCC
Q ss_conf             88998888821365467
Q gi|254780167|r   47 NEKHCPYCSTLYHFDSS   63 (78)
Q Consensus        47 ~~v~C~YC~~~fv~~~~   63 (78)
                      -++.|.||+++|.++..
T Consensus       259 iev~C~FC~~~Y~f~~~  275 (292)
T 1i7f_A          259 IDMHCDYCGNHYLFNAM  275 (292)
T ss_dssp             -----------------
T ss_pred             EEEEEECCCCEEEECHH
T ss_conf             89995687998988999


No 14 
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=55.57  E-value=1.5  Score=22.80  Aligned_cols=22  Identities=27%  Similarity=0.640  Sum_probs=17.5

Q ss_pred             CCCCEEECCC--CCCEEEECCCCC
Q ss_conf             9998899888--882136546768
Q gi|254780167|r   44 GEENEKHCPY--CSTLYHFDSSLD   65 (78)
Q Consensus        44 ~~~~~v~C~Y--C~~~fv~~~~l~   65 (78)
                      +++.+-.|+|  |++.|...+.|+
T Consensus         4 ~~~k~y~C~~~~C~k~F~~~~~L~   27 (37)
T 1va1_A            4 GKKKQHICHIQGCGKVYGKTSHLR   27 (37)
T ss_dssp             SSCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCCCCCCCCCCCCCCEECCHHHHH
T ss_conf             898887991989899759657867


No 15 
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=52.18  E-value=1.3  Score=23.11  Aligned_cols=18  Identities=17%  Similarity=0.425  Sum_probs=14.3

Q ss_pred             EEECCCCCCEEEECCCCC
Q ss_conf             899888882136546768
Q gi|254780167|r   48 EKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        48 ~v~C~YC~~~fv~~~~l~   65 (78)
                      +-.|++|++.|...+.|+
T Consensus         2 p~~C~~C~k~F~~~~~L~   19 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLK   19 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHH
T ss_pred             CCCCCCCCCCCCCHHHHC
T ss_conf             836889879987705822


No 16 
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=46.38  E-value=2.6  Score=21.44  Aligned_cols=17  Identities=24%  Similarity=0.651  Sum_probs=13.9

Q ss_pred             ECCCCCCEEEECCCCCC
Q ss_conf             98888821365467684
Q gi|254780167|r   50 HCPYCSTLYHFDSSLDS   66 (78)
Q Consensus        50 ~C~YC~~~fv~~~~l~~   66 (78)
                      .|+.|+++|-....|.-
T Consensus         4 ~C~~C~KrFsRSDhLsk   20 (32)
T 2kfq_A            4 ACPACPKRFMRSDALSK   20 (32)
T ss_dssp             SSSSSCTTHHHHHTTSS
T ss_pred             CCCCCCCCCCCHHHHHH
T ss_conf             67755553250277888


No 17 
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=46.17  E-value=3.2  Score=20.95  Aligned_cols=49  Identities=8%  Similarity=0.287  Sum_probs=26.1

Q ss_pred             EEEECCEEEEEE--CCCCCCCCCEEEE---EC-CCCCEEECCCCCCEEEECCCCC
Q ss_conf             199465499993--7899889867999---95-9998899888882136546768
Q gi|254780167|r   17 RIKIGVKKFMCA--GTSPPLDHPHVFI---NM-GEENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        17 ~I~v~~~~v~Cd--Gg~g~lgHP~V~l---~l-~~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .|....|.+.|+  +=+-.+....-+.   .+ -.+..-.|++|++.|...+.|+
T Consensus        12 ~~~~~~kpy~C~~~~C~k~F~~~~~l~~H~~~H~~~k~~~C~~C~k~F~~~~~L~   66 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLT   66 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHH
T ss_conf             7898996953998878893297899999998608983827998988739889997


No 18 
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.97  E-value=4.3  Score=20.25  Aligned_cols=22  Identities=18%  Similarity=0.368  Sum_probs=17.8

Q ss_pred             CCCEEECCCCCCEEEECCCCCC
Q ss_conf             9988998888821365467684
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLDS   66 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~~   66 (78)
                      .+.+-.|..|++.|...+.|+.
T Consensus         7 gekpy~C~~Cgk~F~~~~~L~~   28 (41)
T 2ept_A            7 GQRVYECQECGKSFRQKGSLTL   28 (41)
T ss_dssp             CCCCEECSSSCCEESSHHHHHH
T ss_pred             CCCCEECCCCCCEECCHHHHHH
T ss_conf             9979868986986486789999


No 19 
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=40.47  E-value=2.2  Score=21.84  Aligned_cols=21  Identities=19%  Similarity=0.428  Sum_probs=16.8

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|++|++.|...+.|+
T Consensus         8 gekPy~C~~Cgk~F~~~~~L~   28 (37)
T 1p7a_A            8 GIKPFQCPDCDRSFSRSDHLA   28 (37)
T ss_dssp             CSSSBCCTTTCCCBSSHHHHH
T ss_pred             CCCCEECCCCCCEECCHHHHH
T ss_conf             888947899999917788889


No 20 
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.70  E-value=4.3  Score=20.22  Aligned_cols=21  Identities=24%  Similarity=0.455  Sum_probs=17.4

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|.+|++.|.....|+
T Consensus         9 GeKpy~C~~Cgk~F~~~~~L~   29 (44)
T 2eof_A            9 GEKPYECNECQKAFNTKSNLM   29 (44)
T ss_dssp             CCCSEECTTTCCEESCHHHHH
T ss_pred             CCCCEECCCCCCEECCHHHHH
T ss_conf             997947898699828778878


No 21 
>2gag_D Heterotetrameric sarcosine oxidase delta-subunit; flavoenzyme, electron transfer, folate- methylating enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_D* 1x31_D* 1vrq_D* 3ad7_D* 3ad8_D* 3ad9_D* 3ada_D*
Probab=39.68  E-value=6.9  Score=19.13  Aligned_cols=18  Identities=17%  Similarity=0.624  Sum_probs=12.9

Q ss_pred             EEECCCCCCE----EEECCCCC
Q ss_conf             8998888821----36546768
Q gi|254780167|r   48 EKHCPYCSTL----YHFDSSLD   65 (78)
Q Consensus        48 ~v~C~YC~~~----fv~~~~l~   65 (78)
                      .+.|||||.|    |.|.+..+
T Consensus         3 ~I~CP~CG~Rd~~EF~y~Gea~   24 (99)
T 2gag_D            3 LIDCPNCGPRNENEFKYGGEAH   24 (99)
T ss_dssp             EEEETTTEEEEGGGSEEEEESS
T ss_pred             EECCCCCCCCCHHHCCCCCCCC
T ss_conf             7649998971176535777444


No 22 
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.02  E-value=5.6  Score=19.61  Aligned_cols=21  Identities=14%  Similarity=0.456  Sum_probs=17.4

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|.....|.
T Consensus         9 ~Ekpy~C~~Cgk~F~~~~~L~   29 (44)
T 2emb_A            9 TRKRYECSKCQATFNLRKHLI   29 (44)
T ss_dssp             CCSSEECTTTCCEESCHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             986967899989558779999


No 23 
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.69  E-value=6  Score=19.46  Aligned_cols=22  Identities=18%  Similarity=0.360  Sum_probs=17.8

Q ss_pred             CCCEEECCCCCCEEEECCCCCC
Q ss_conf             9988998888821365467684
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLDS   66 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~~   66 (78)
                      .+.+-.|.+|++.|...+.|..
T Consensus         9 geKpy~C~~Cgk~F~~~s~L~~   30 (46)
T 2emm_A            9 GERPHKCNECGKSFIQSAHLIQ   30 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHHH
T ss_conf             9989389999997487899999


No 24 
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.37  E-value=4.4  Score=20.19  Aligned_cols=22  Identities=18%  Similarity=0.369  Sum_probs=17.6

Q ss_pred             CCCEEECCCCCCEEEECCCCCC
Q ss_conf             9988998888821365467684
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLDS   66 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~~   66 (78)
                      .+.+-.|..|++.|...+.|+.
T Consensus         8 GeKPy~C~~Cgk~F~~~~~L~~   29 (42)
T 2en2_A            8 GEKPYKCETCGARFVQVAHLRA   29 (42)
T ss_dssp             SSCSEECTTTCCEESSHHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHHH
T ss_conf             9789788986998388889999


No 25 
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.13  E-value=6.1  Score=19.42  Aligned_cols=21  Identities=24%  Similarity=0.529  Sum_probs=17.5

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .++.-.|.+|++.|.+..+|.
T Consensus         9 gekpy~C~~Cgk~F~~~~~L~   29 (46)
T 2en8_A            9 GEKSHTCDECGKNFCYISALR   29 (46)
T ss_dssp             CCSSEECTTTCCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             998928998897878789999


No 26 
>1pg5_B Aspartate carbamoyltransferase regulatory chain; 2.60A {Sulfolobus acidocaldarius} SCOP: d.58.2.1 g.41.7.1 PDB: 2be9_B*
Probab=36.80  E-value=19  Score=16.67  Aligned_cols=24  Identities=25%  Similarity=0.560  Sum_probs=17.1

Q ss_pred             EEEEECCC-CCEEECCCCCCEEEEC
Q ss_conf             79999599-9889988888213654
Q gi|254780167|r   38 HVFINMGE-ENEKHCPYCSTLYHFD   61 (78)
Q Consensus        38 ~V~l~l~~-~~~v~C~YC~~~fv~~   61 (78)
                      ..|.-+++ +....|-||++.|..+
T Consensus       132 ~~f~~~~~~~~~lrC~YCe~~~~~~  156 (168)
T 1pg5_B          132 PTFKTLTEKPLKMRCEYCETIIDEN  156 (168)
T ss_dssp             CEEEEEETTTTEEEETTTCCEEEHH
T ss_pred             CEEEEEECCCCEEEEECCCCEECHH
T ss_conf             6799983899789806799792699


No 27 
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.10  E-value=7.3  Score=19.00  Aligned_cols=21  Identities=19%  Similarity=0.343  Sum_probs=17.2

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|.+|++.|.....|.
T Consensus         6 ~eKPykC~~C~k~F~~~~~L~   26 (36)
T 2elq_A            6 SGKPFKCSLCEYATRSKSNLK   26 (36)
T ss_dssp             CCCSEECSSSSCEESCHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             998986899876048879999


No 28 
>2air_B Aspartate carbamoyltransferase regulatory chain; aspartate transcarbamylase, alanosine, carbamyl phosphate, T-state; HET: AL0; 2.00A {Escherichia coli} SCOP: d.58.2.1 g.41.7.1 PDB: 1ezz_B 1f1b_B* 1i5o_B* 1q95_G* 1r0b_G* 1r0c_B* 1raa_B* 1rab_B* 1rac_B* 1rad_B* 1rae_B* 1raf_B* 1rag_B* 1rah_B* 1rai_B* 1sku_B 1tth_B* 1tu0_B 1tug_B* 1xjw_B* ...
Probab=34.82  E-value=22  Score=16.42  Aligned_cols=26  Identities=12%  Similarity=0.387  Sum_probs=17.2

Q ss_pred             CCEEEEECCCC-CEEECCCCCCEEEEC
Q ss_conf             86799995999-889988888213654
Q gi|254780167|r   36 HPHVFINMGEE-NEKHCPYCSTLYHFD   61 (78)
Q Consensus        36 HP~V~l~l~~~-~~v~C~YC~~~fv~~   61 (78)
                      -++.|+..+.+ ....|-||++.|..+
T Consensus       122 ~~~f~~~~~~~~~~~rC~YCe~~~~~~  148 (153)
T 2air_B          122 SSSFAVRKRANDIALKCKYCEKEFSHN  148 (153)
T ss_dssp             CCEEEEEECSSCEEEEETTTCCEEEHH
T ss_pred             CCEEEEEECCCCCEEEEECCCCCCCCC
T ss_conf             855899973898189957899793527


No 29 
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.66  E-value=3.1  Score=20.99  Aligned_cols=21  Identities=29%  Similarity=0.528  Sum_probs=17.0

Q ss_pred             CCEEECCCCCCEEEECCCCCC
Q ss_conf             988998888821365467684
Q gi|254780167|r   46 ENEKHCPYCSTLYHFDSSLDS   66 (78)
Q Consensus        46 ~~~v~C~YC~~~fv~~~~l~~   66 (78)
                      +.+-.|.+|++.|...+.|+.
T Consensus         9 ekpy~C~~Cgk~F~~~~~L~~   29 (42)
T 2eos_A            9 EKPYPCEICGTRFRHLQTLKS   29 (42)
T ss_dssp             SCCBCCSSSCCCBSSHHHHHH
T ss_pred             CCCEECCCCCCEECCHHHHHH
T ss_conf             889758988984078899999


No 30 
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.63  E-value=7.2  Score=19.03  Aligned_cols=21  Identities=24%  Similarity=0.498  Sum_probs=17.1

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|.+|++.|...+.|.
T Consensus         9 GeKpy~C~~Cgk~F~~~~~L~   29 (46)
T 2ep2_A            9 GEKPYECSICGKSFTKKSQLH   29 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHH
T ss_pred             CCCCEECCCCCCEECCHHHHH
T ss_conf             996967898799708778999


No 31 
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.39  E-value=7.6  Score=18.91  Aligned_cols=21  Identities=24%  Similarity=0.482  Sum_probs=17.5

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|.....|.
T Consensus         9 gEkpy~C~~CgK~F~~~s~L~   29 (46)
T 2yso_A            9 REKSHQCRECGEIFFQYVSLI   29 (46)
T ss_dssp             CCCCEECTTTCCEESSHHHHH
T ss_pred             CCCCCCCCCCCCCCCCHHHHH
T ss_conf             998828899989777458789


No 32 
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.19  E-value=5.9  Score=19.49  Aligned_cols=22  Identities=23%  Similarity=0.542  Sum_probs=17.9

Q ss_pred             CCCEEECCCCCCEEEECCCCCC
Q ss_conf             9988998888821365467684
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLDS   66 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~~   66 (78)
                      .+++-.|..|++.|.+...|+.
T Consensus         9 gEKpy~C~~Cgk~F~~~~~L~~   30 (46)
T 2ene_A            9 GEKPYKCNECGKVFRHNSYLSR   30 (46)
T ss_dssp             CSSSEECSSSCCEESSHHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHHH
T ss_conf             9969489999997588899999


No 33 
>3gce_A Ferredoxin component of carbazole 1,9A- dioxygenase; rieske ferredoxin, 2Fe-2S, electron transfer, oxidoreductase; 2.00A {Nocardioides aromaticivorans}
Probab=33.89  E-value=20  Score=16.60  Aligned_cols=49  Identities=10%  Similarity=0.103  Sum_probs=30.8

Q ss_pred             CCEEEECCEEEEEECCCCCCCCCEEEEEC-CCCCEEECCCCCCEEEECCC
Q ss_conf             85199465499993789988986799995-99988998888821365467
Q gi|254780167|r   15 HSRIKIGVKKFMCAGTSPPLDHPHVFINM-GEENEKHCPYCSTLYHFDSS   63 (78)
Q Consensus        15 ~~~I~v~~~~v~CdGg~g~lgHP~V~l~l-~~~~~v~C~YC~~~fv~~~~   63 (78)
                      +-++..+.+.++.+.--+-.|=|..+-.+ .+++.+.||+.+-+|-++..
T Consensus        35 i~l~r~~g~~~A~~~~CpH~g~~L~~g~~~~~~~~i~CP~H~~~Fdl~tG   84 (121)
T 3gce_A           35 VMVVRDGDSVYAISNLCSHAEAYLDMGVFHAESLEIECPLHVGRFDVRTG   84 (121)
T ss_dssp             EEEEEETTEEEEEESBCSSSSCBGGGSEEETTTTEEECTTTCCEEETTTC
T ss_pred             EEEEEECCEEEEEECCCCCCCCCCCCCCEECCCCEEEECCCCCEEECCCC
T ss_conf             99999899999997739989978415748648999996899989999996


No 34 
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.76  E-value=7.6  Score=18.90  Aligned_cols=21  Identities=24%  Similarity=0.384  Sum_probs=17.2

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|.+|++.|.....|.
T Consensus         9 GeKpy~C~~Cgk~F~~~s~L~   29 (46)
T 2ep3_A            9 GEKPYRCAECGKAFTDRSNLF   29 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             997948999899628778999


No 35 
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.67  E-value=8.6  Score=18.59  Aligned_cols=21  Identities=24%  Similarity=0.495  Sum_probs=17.5

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|.....|.
T Consensus         9 geKpy~C~~Cgk~F~~~s~L~   29 (46)
T 2epw_A            9 GEKPCKCTECGKAFCWKSQLI   29 (46)
T ss_dssp             CCCSEECSSSCCEESSSHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             996948999996838769999


No 36 
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.67  E-value=6.1  Score=19.41  Aligned_cols=21  Identities=24%  Similarity=0.472  Sum_probs=17.3

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|.+|++.|...+.|.
T Consensus         9 GEkpy~C~~C~k~F~~~~~L~   29 (46)
T 2en1_A            9 GEKPFKCEECGKRFTQNSQLH   29 (46)
T ss_dssp             CCCSEEETTTTEEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             978978999899567789999


No 37 
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.36  E-value=8.2  Score=18.72  Aligned_cols=21  Identities=24%  Similarity=0.371  Sum_probs=17.3

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|.....|.
T Consensus         7 geKpy~C~~Cgk~F~~~~~L~   27 (44)
T 2emx_A            7 GEKPFGCSCCEKAFSSKSYLL   27 (44)
T ss_dssp             SCCCEECSSSSCEESSHHHHH
T ss_pred             CCCCEECCCCCCEECCHHHHH
T ss_conf             998978999898738778999


No 38 
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.04  E-value=6.7  Score=19.21  Aligned_cols=21  Identities=24%  Similarity=0.532  Sum_probs=17.4

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|.....|+
T Consensus         9 GeKpy~C~~CgK~F~~~~~L~   29 (46)
T 2eq0_A            9 GEKPYKCHECGKVFRRNSHLA   29 (46)
T ss_dssp             CCCCEECTTTCCEESSHHHHH
T ss_pred             CCCCEECCCCCCEECCHHHHH
T ss_conf             996968999998718789999


No 39 
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.48  E-value=7.5  Score=18.94  Aligned_cols=21  Identities=24%  Similarity=0.536  Sum_probs=17.0

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|.+|++.|.....|.
T Consensus         9 GEKpy~C~~Cgk~F~~~~~L~   29 (46)
T 2ytk_A            9 GEKPYKCNECGKVFTQNSHLT   29 (46)
T ss_dssp             SSCSEECSSSCCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             998979999999758889999


No 40 
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.17  E-value=8.2  Score=18.73  Aligned_cols=21  Identities=24%  Similarity=0.438  Sum_probs=17.3

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|..|++.|...+.|.
T Consensus         9 GEkpy~C~~Cgk~F~~~s~L~   29 (46)
T 2ytj_A            9 GEKPYICAECGKAFTIRSNLI   29 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             997978998799628689999


No 41 
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=31.96  E-value=7.5  Score=18.94  Aligned_cols=21  Identities=14%  Similarity=0.284  Sum_probs=16.5

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|..|++.|.....|+
T Consensus         9 ~ekpy~C~~Cgk~F~~~~~L~   29 (54)
T 2eps_A            9 VGKPYICQSCGKGFSRPDHLN   29 (54)
T ss_dssp             SSCCEECSSSCCEESSHHHHH
T ss_pred             CCCCCCCCCCCCCCCCHHHCC
T ss_conf             987866889899868744625


No 42 
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=31.89  E-value=20  Score=16.55  Aligned_cols=16  Identities=13%  Similarity=0.164  Sum_probs=12.2

Q ss_pred             CCEEECCCCCCEEEEC
Q ss_conf             9889988888213654
Q gi|254780167|r   46 ENEKHCPYCSTLYHFD   61 (78)
Q Consensus        46 ~~~v~C~YC~~~fv~~   61 (78)
                      ...+.|||||-.|.-+
T Consensus       285 ~~~v~Cp~CgA~y~~~  300 (325)
T 3mv2_A          285 TPSVSDPLTGSKYVIT  300 (325)
T ss_dssp             SCEEECTTTCCEEEGG
T ss_pred             CCCCCCCCCCCEECHH
T ss_conf             9971417978862563


No 43 
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=31.63  E-value=8.7  Score=18.57  Aligned_cols=21  Identities=19%  Similarity=0.270  Sum_probs=17.0

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|..|++.|.....|.
T Consensus         9 geKpy~C~~Cgk~F~~~s~L~   29 (46)
T 2el6_A            9 GVNPYKCSQCEKSFSGKLRLL   29 (46)
T ss_dssp             CCCSEECSSSSCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             997978999899858888999


No 44 
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.57  E-value=9.9  Score=18.26  Aligned_cols=21  Identities=24%  Similarity=0.531  Sum_probs=17.5

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|.+.+.|.
T Consensus         9 GEKpy~C~~Cgk~F~~~s~L~   29 (46)
T 2yu8_A            9 GEKPYKCNECGKVFTQNSHLA   29 (46)
T ss_dssp             CCSSEECSSSCCEESSSHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             997918999999958889999


No 45 
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=31.48  E-value=8.8  Score=18.55  Aligned_cols=22  Identities=18%  Similarity=0.375  Sum_probs=17.7

Q ss_pred             CCCEEECCCCCCEEEECCCCCC
Q ss_conf             9988998888821365467684
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLDS   66 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~~   66 (78)
                      .+++-.|..|++.|...+.|..
T Consensus         9 GeKpy~C~~CgK~F~~~s~L~~   30 (46)
T 2el4_A            9 GVKPYGCSQCAKTFSLKSQLIV   30 (46)
T ss_dssp             CCCSEECSSSSCEESSHHHHHH
T ss_pred             CCCCEECCCCCCEECCHHHHHH
T ss_conf             9889789982998086467667


No 46 
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.48  E-value=8.5  Score=18.64  Aligned_cols=21  Identities=24%  Similarity=0.365  Sum_probs=17.5

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|...+.|.
T Consensus         9 GEkpy~C~~Cgk~F~~~s~L~   29 (46)
T 2emh_A            9 GERPYICTVCGKAFTDRSNLI   29 (46)
T ss_dssp             CCCSEECTTTCCEESSHHHHH
T ss_pred             CCCCEECCCCCCEECCHHHHH
T ss_conf             997968999999508789999


No 47 
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=31.39  E-value=4  Score=20.40  Aligned_cols=19  Identities=16%  Similarity=0.345  Sum_probs=14.8

Q ss_pred             CEEECCC--CCCEEEECCCCC
Q ss_conf             8899888--882136546768
Q gi|254780167|r   47 NEKHCPY--CSTLYHFDSSLD   65 (78)
Q Consensus        47 ~~v~C~Y--C~~~fv~~~~l~   65 (78)
                      .+-.|+|  |+++|...+.|+
T Consensus         2 kPf~C~~~gC~k~F~~~~~L~   22 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLI   22 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHH
T ss_pred             CCEECCCCCCCCEECCHHHHH
T ss_conf             385797899897738774889


No 48 
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.39  E-value=8.6  Score=18.62  Aligned_cols=21  Identities=24%  Similarity=0.494  Sum_probs=17.2

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|...+.|.
T Consensus         9 GeKpy~C~~Cgk~F~~~~~L~   29 (46)
T 2em3_A            9 GEKPYECKVCSKAFTQKAHLA   29 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             996958999999848889999


No 49 
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=31.37  E-value=7.5  Score=18.93  Aligned_cols=18  Identities=22%  Similarity=0.394  Sum_probs=8.5

Q ss_pred             CEEECCCCCCEEEECCCC
Q ss_conf             889988888213654676
Q gi|254780167|r   47 NEKHCPYCSTLYHFDSSL   64 (78)
Q Consensus        47 ~~v~C~YC~~~fv~~~~l   64 (78)
                      .+-.|.+|++.|.....|
T Consensus        13 kpy~C~~C~k~f~~~~~L   30 (72)
T 1x6e_A           13 KPYGCVECGKAFSRSSIL   30 (72)
T ss_dssp             CCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCEECCHHHH
T ss_conf             781799998873989999


No 50 
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=31.33  E-value=9.1  Score=18.48  Aligned_cols=21  Identities=24%  Similarity=0.556  Sum_probs=17.3

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|..|++.|...+.|.
T Consensus         9 GEKpy~C~~CgK~F~~~~~L~   29 (46)
T 2ema_A            9 GEKRYKCNECGKVFSRNSQLS   29 (46)
T ss_dssp             TSCCEECSSSCCEESSHHHHH
T ss_pred             CCCCEECCCCCCEECCHHHHH
T ss_conf             998948999898628788999


No 51 
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.27  E-value=9.4  Score=18.39  Aligned_cols=21  Identities=24%  Similarity=0.305  Sum_probs=17.4

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|..|++.|.+...|.
T Consensus         9 gEkpy~C~~Cgk~F~~~~~L~   29 (46)
T 2eoo_A            9 GERPYGCNECGKNFGRHSHLI   29 (46)
T ss_dssp             CCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             997978998899858788999


No 52 
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.11  E-value=9.6  Score=18.35  Aligned_cols=21  Identities=24%  Similarity=0.420  Sum_probs=17.6

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|..|++.|...+.|.
T Consensus         9 GEkpy~C~~Cgk~F~~~s~L~   29 (46)
T 2ytg_A            9 GEKPFKCGECGKSYNQRVHLT   29 (46)
T ss_dssp             SCCSEECTTTCCEESSSHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             997968999998618788999


No 53 
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=31.04  E-value=6.1  Score=19.41  Aligned_cols=17  Identities=29%  Similarity=0.585  Sum_probs=8.8

Q ss_pred             EEECCCCCCEEEECCCC
Q ss_conf             89988888213654676
Q gi|254780167|r   48 EKHCPYCSTLYHFDSSL   64 (78)
Q Consensus        48 ~v~C~YC~~~fv~~~~l   64 (78)
                      +-.|++|++.|.....|
T Consensus        74 py~C~~C~k~F~~~~~L   90 (129)
T 2wbt_A           74 QFVCPLCLMPFSSSVSL   90 (129)
T ss_dssp             SEECTTTCCEESSHHHH
T ss_pred             CEECCCCCCCCCCHHHH
T ss_conf             81889999871874461


No 54 
>2be7_D Aspartate carbamoyltransferase regulatory chain; atcase, psychrophilic, cold adaptation, allosteric, holoenzyme; 2.85A {Moritella profunda}
Probab=30.91  E-value=16  Score=17.12  Aligned_cols=26  Identities=23%  Similarity=0.474  Sum_probs=17.1

Q ss_pred             CCEEEEECCCCC-EEECCCCCCEEEEC
Q ss_conf             867999959998-89988888213654
Q gi|254780167|r   36 HPHVFINMGEEN-EKHCPYCSTLYHFD   61 (78)
Q Consensus        36 HP~V~l~l~~~~-~v~C~YC~~~fv~~   61 (78)
                      -++.|+..+++. ...|-||++.|..+
T Consensus       121 ~~~f~~~~~~~~~~~rC~YCe~~~~~~  147 (153)
T 2be7_D          121 TSSFSIKKTKGNIGLKCKYCEKTFSKD  147 (153)
T ss_dssp             CCCEEEEEETTEEEEEETTTCCEEEHH
T ss_pred             CCEEEEEECCCCCEEEEECCCCCCCHH
T ss_conf             734999954898589917899793675


No 55 
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.86  E-value=9.7  Score=18.33  Aligned_cols=22  Identities=23%  Similarity=0.394  Sum_probs=17.7

Q ss_pred             CCCEEECCCCCCEEEECCCCCC
Q ss_conf             9988998888821365467684
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLDS   66 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~~   66 (78)
                      .+++-.|..|++.|...+.|..
T Consensus         9 GeKpy~C~~CgK~F~~~s~L~~   30 (46)
T 2ytp_A            9 GERHYECSECGKAFARKSTLIM   30 (46)
T ss_dssp             CCCCEECSSSCCEESSHHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHHH
T ss_conf             9889488998983466899998


No 56 
>2waq_P DNA-directed RNA polymerase RPO12 subunit; multi-subunit, transcription; 3.35A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 3hkz_P
Probab=30.76  E-value=14  Score=17.41  Aligned_cols=15  Identities=33%  Similarity=0.733  Sum_probs=11.4

Q ss_pred             EEECCCCCCEEEECC
Q ss_conf             899888882136546
Q gi|254780167|r   48 EKHCPYCSTLYHFDS   62 (78)
Q Consensus        48 ~v~C~YC~~~fv~~~   62 (78)
                      .+-|||||-+-++.-
T Consensus        23 ~IrCPyCGfri~~kv   37 (48)
T 2waq_P           23 GVRCPYCGYKIIFMV   37 (48)
T ss_dssp             SSSCTTTCCCCEECC
T ss_pred             CCCCCCCCCEEEEEE
T ss_conf             864463571899984


No 57 
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=30.67  E-value=8.9  Score=18.51  Aligned_cols=21  Identities=24%  Similarity=0.400  Sum_probs=17.5

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|..|++.|...+.|.
T Consensus         8 GeKPy~C~~CgK~F~~~~~L~   28 (42)
T 2epc_A            8 GETPYLCGQCGKSFTQRGSLA   28 (42)
T ss_dssp             SSCCEECSSSCCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             988988899998467678988


No 58 
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=30.57  E-value=9.5  Score=18.38  Aligned_cols=17  Identities=24%  Similarity=0.540  Sum_probs=13.4

Q ss_pred             EECCCCCCEEEECCCCC
Q ss_conf             99888882136546768
Q gi|254780167|r   49 KHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        49 v~C~YC~~~fv~~~~l~   65 (78)
                      -.||-|+++|.....|.
T Consensus         3 f~C~~C~krFmRSDHLs   19 (29)
T 1rik_A            3 FACPECPKRFMRSDHLT   19 (29)
T ss_dssp             EECSSSSCEESCSHHHH
T ss_pred             CCCCCCCCCCCHHHHHH
T ss_conf             40777766422258889


No 59 
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.32  E-value=9.8  Score=18.29  Aligned_cols=21  Identities=19%  Similarity=0.425  Sum_probs=17.6

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|.+|++.|...++|.
T Consensus         9 geKpy~C~~C~k~F~~~~~L~   29 (46)
T 2emf_A            9 GGKHFECTECGKAFTRKSTLS   29 (46)
T ss_dssp             SSCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCCCCCCCCCCHHHHH
T ss_conf             997818989999666648899


No 60 
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.29  E-value=7.5  Score=18.92  Aligned_cols=21  Identities=29%  Similarity=0.634  Sum_probs=17.5

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|..|++.|.....|+
T Consensus         9 Gekpy~C~~C~k~F~~~~~L~   29 (46)
T 2ep0_A            9 GEKPYKCDVCHKSFRYGSSLT   29 (46)
T ss_dssp             TCCSEECSSSCCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             997928989799868778999


No 61 
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=30.27  E-value=9.5  Score=18.37  Aligned_cols=21  Identities=24%  Similarity=0.504  Sum_probs=17.5

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|..|++.|...++|.
T Consensus         9 GeKPy~C~~Cgk~F~~~s~L~   29 (46)
T 2emj_A            9 GEKPFECAECGKSFSISSQLA   29 (46)
T ss_dssp             CCCSEECSSSSCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             977938998898617689999


No 62 
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.13  E-value=9.5  Score=18.37  Aligned_cols=21  Identities=19%  Similarity=0.276  Sum_probs=17.1

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|.+|++.|...+.|.
T Consensus         9 gekpy~C~~C~k~F~~~~~L~   29 (46)
T 2enc_A            9 GEKPFKCEECGKGFYTNSQCY   29 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHH
T ss_pred             CCCCCCCCCCCCCCCCHHHHH
T ss_conf             988818998997647678888


No 63 
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.11  E-value=11  Score=18.05  Aligned_cols=21  Identities=24%  Similarity=0.458  Sum_probs=17.4

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|.....|.
T Consensus         9 geKpy~C~~Cgk~F~~~s~L~   29 (44)
T 2yu5_A            9 GENPFKCSKCDRVFTQRNYLV   29 (44)
T ss_dssp             CCCSEECSSSSCEESSSHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             986946899899608668999


No 64 
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.08  E-value=4.8  Score=19.99  Aligned_cols=21  Identities=19%  Similarity=0.390  Sum_probs=17.0

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|...+.|.
T Consensus         7 GeKpy~C~~CgK~F~~~s~L~   27 (42)
T 2yte_A            7 GEKPYSCAECKETFSDNNRLV   27 (42)
T ss_dssp             SCCSCBCTTTCCBCSSHHHHH
T ss_pred             CCCCEECCCCCCEECCHHHHH
T ss_conf             988962899889528646867


No 65 
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious disease, electron transport; NMR {Mycobacterium tuberculosis}
Probab=30.01  E-value=27  Score=15.90  Aligned_cols=31  Identities=19%  Similarity=0.500  Sum_probs=17.8

Q ss_pred             CCCCCEEECCCCCCEEEECCCCCC-CCCCCCCCE
Q ss_conf             599988998888821365467684-446880024
Q gi|254780167|r   43 MGEENEKHCPYCSTLYHFDSSLDS-KETLPVGCL   75 (78)
Q Consensus        43 l~~~~~v~C~YC~~~fv~~~~l~~-~es~P~~c~   75 (78)
                      +.+-+.-.|.-|+  |+|++.... .+-.||+-.
T Consensus        22 ~~e~~~y~C~~Cg--yiYDp~~GD~~~gippGT~   53 (81)
T 2kn9_A           22 MNDYKLFRCIQCG--FEYDEALGWPEDGIAAGTR   53 (81)
T ss_dssp             SSCCCEEEETTTC--CEEETTTCBTTTTBCTTCC
T ss_pred             CCCCCEEECCCCC--EEECCCCCCCCCCCCCCCC
T ss_conf             6677759829999--3876665884568798897


No 66 
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.82  E-value=9.4  Score=18.38  Aligned_cols=21  Identities=24%  Similarity=0.547  Sum_probs=17.3

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|...+.|.
T Consensus         9 GEKpy~C~~Cgk~F~~~~~l~   29 (46)
T 2eml_A            9 GEKPYECSVCGKAFSHRQSLS   29 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             997977898699808789999


No 67 
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.48  E-value=7.7  Score=18.86  Aligned_cols=21  Identities=24%  Similarity=0.412  Sum_probs=17.4

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|..|++.|.+...|.
T Consensus         9 GEKpy~C~~Cgk~F~~~~~L~   29 (46)
T 2en6_A            9 GEKPYGCNECGKTFSQKSILS   29 (46)
T ss_dssp             SSCCEEETTTTEEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             998979989899777889999


No 68 
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.33  E-value=8.4  Score=18.65  Aligned_cols=21  Identities=24%  Similarity=0.487  Sum_probs=17.6

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|...+.|+
T Consensus         9 GeKpy~C~~C~k~F~~~~~L~   29 (46)
T 2yto_A            9 GEKPYKCSDCGKAFTRKSGLH   29 (46)
T ss_dssp             SCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCEECCCCCCEECCHHHHH
T ss_conf             988958899989708758999


No 69 
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.29  E-value=10  Score=18.22  Aligned_cols=21  Identities=24%  Similarity=0.528  Sum_probs=17.0

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|..|+..|.....|.
T Consensus         6 geKPykC~~C~k~F~~~~~L~   26 (36)
T 2elt_A            6 SGKPYKCPQCSYASAIKANLN   26 (36)
T ss_dssp             CCCSEECSSSSCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             993986899988719889999


No 70 
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.20  E-value=12  Score=17.84  Aligned_cols=21  Identities=19%  Similarity=0.409  Sum_probs=17.4

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|..|++.|.+...|.
T Consensus         9 ~EKpy~C~~C~k~F~~~~~L~   29 (46)
T 2eoy_A            9 KEKCFKCNKCEKTFSCSKYLT   29 (46)
T ss_dssp             CSCCEECSSSCCEESSSHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             997918999998848879999


No 71 
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.11  E-value=11  Score=17.92  Aligned_cols=21  Identities=24%  Similarity=0.450  Sum_probs=17.5

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|..|++.|.....|.
T Consensus         9 gekpy~C~~Cgk~F~~~s~L~   29 (46)
T 2en3_A            9 GEKPFQCKECGMNFSWSCSLF   29 (46)
T ss_dssp             CCCSEECSSSCCEESSSHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             998968999999887688999


No 72 
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=28.86  E-value=7.8  Score=18.84  Aligned_cols=21  Identities=24%  Similarity=0.460  Sum_probs=17.3

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|.....|+
T Consensus         7 GEkpy~C~~Cgk~F~~~s~L~   27 (42)
T 2el5_A            7 GENPYECSECGKAFNRKDQLI   27 (42)
T ss_dssp             SCCSEECSSSCCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             997987998799807758999


No 73 
>2j6a_A Protein TRM112; translation termination, methyltransferase, transferase, ERF1, nuclear protein, protein methylation; 1.7A {Saccharomyces cerevisiae}
Probab=28.79  E-value=20  Score=16.62  Aligned_cols=19  Identities=26%  Similarity=0.681  Sum_probs=15.2

Q ss_pred             CCCEEECCCCCCEEEECCC
Q ss_conf             9988998888821365467
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSS   63 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~   63 (78)
                      .+|.-+||=||+.|-.+.+
T Consensus       106 ~EG~LvCp~cGr~ypI~~G  124 (141)
T 2j6a_A          106 AEGEMKCRNCGHIYYIKNG  124 (141)
T ss_dssp             EEEEEECTTTCCEEEEETT
T ss_pred             EECEEECCCCCCCCCCCCC
T ss_conf             6254887999987314258


No 74 
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.68  E-value=11  Score=18.08  Aligned_cols=21  Identities=24%  Similarity=0.374  Sum_probs=17.3

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|.....|.
T Consensus         9 GeKpy~C~~Cgk~F~~~s~L~   29 (46)
T 2emp_A            9 GVKPYMCNECGKAFSVYSSLT   29 (46)
T ss_dssp             CCCSEECSSSCCEESCHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             983837899999347588999


No 75 
>1fqt_A Rieske-type ferredoxin of biphenyl dioxygenase; 2Fe-2S cluster, beta sandwich, oxidoreductase; 1.60A {Burkholderia xenovorans LB400} SCOP: b.33.1.1 PDB: 2e4q_A 2e4p_A 2yvj_B*
Probab=28.03  E-value=27  Score=15.88  Aligned_cols=46  Identities=9%  Similarity=0.021  Sum_probs=26.0

Q ss_pred             EEECCEEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCEEEECCC
Q ss_conf             9946549999378998898679999599988998888821365467
Q gi|254780167|r   18 IKIGVKKFMCAGTSPPLDHPHVFINMGEENEKHCPYCSTLYHFDSS   63 (78)
Q Consensus        18 I~v~~~~v~CdGg~g~lgHP~V~l~l~~~~~v~C~YC~~~fv~~~~   63 (78)
                      +..+.+.++-+.-=+-.|.|...-.+.+++.+.|||.+.+|-++..
T Consensus        33 ~r~~~~~~A~~~~CpH~g~~L~~g~~~~~~~i~Cp~H~~~f~l~tG   78 (112)
T 1fqt_A           33 FNVDGELFATQDRCTHGDWSLSDGGYLEGDVVECSLHMGKFCVRTG   78 (112)
T ss_dssp             EEETTEEEEEESBCTTSSCBSSTTCCEETTEEECTTTCCEEETTTC
T ss_pred             EEECCEEEEEECCCCCCCCEEECEEEECCCEEEECCCCCEEECCCE
T ss_conf             9989999999774887786830002736985580886999989970


No 76 
>1jd5_A DIAP1, apoptosis 1 inhibitor; IAP, caspase activation; 1.90A {Drosophila melanogaster} SCOP: g.52.1.1 PDB: 1jd4_A 1jd6_A 1q4q_A
Probab=27.68  E-value=30  Score=15.66  Aligned_cols=20  Identities=20%  Similarity=0.373  Sum_probs=15.1

Q ss_pred             EEECCCCCEEECCCCCCEEE
Q ss_conf             99959998899888882136
Q gi|254780167|r   40 FINMGEENEKHCPYCSTLYH   59 (78)
Q Consensus        40 ~l~l~~~~~v~C~YC~~~fv   59 (78)
                      |+-.+....+.|-||+....
T Consensus        52 Fyytg~~D~v~Cf~C~~~l~   71 (124)
T 1jd5_A           52 FFYTGVGDRVRCFSCGGGLM   71 (124)
T ss_dssp             EEECSSTTCEEETTTCCEEE
T ss_pred             CEECCCCCEEEECCCCCEEC
T ss_conf             88759999789655498945


No 77 
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.65  E-value=12  Score=17.84  Aligned_cols=21  Identities=19%  Similarity=0.442  Sum_probs=17.3

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|..|++.|....+|.
T Consensus         9 GEKpy~C~~Cgk~F~~~s~L~   29 (46)
T 2yrj_A            9 GEKPYRCGECGKAFAQKANLT   29 (46)
T ss_dssp             CCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             997928999998408799999


No 78 
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.51  E-value=9.5  Score=18.37  Aligned_cols=21  Identities=19%  Similarity=0.450  Sum_probs=17.0

Q ss_pred             CCCEEECCC--CCCEEEECCCCC
Q ss_conf             998899888--882136546768
Q gi|254780167|r   45 EENEKHCPY--CSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~Y--C~~~fv~~~~l~   65 (78)
                      .+.+-.|.+  |++.|.....|+
T Consensus         9 GekP~~C~~~~C~k~F~~~~~L~   31 (48)
T 2ent_A            9 GEKPFACTWPGCGWRFSRSDELS   31 (48)
T ss_dssp             CCCCEECCSSSCCCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCEECCHHHHH
T ss_conf             99795898889899708788888


No 79 
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.23  E-value=9.3  Score=18.43  Aligned_cols=21  Identities=24%  Similarity=0.436  Sum_probs=17.3

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|..|++.|.....|+
T Consensus         9 geKpy~C~~Cgk~F~~~s~L~   29 (44)
T 2epv_A            9 GEKPYECNECGKAFIWKSLLI   29 (44)
T ss_dssp             CCCSEECSSSCCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             998967899898818777878


No 80 
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=27.16  E-value=11  Score=18.05  Aligned_cols=18  Identities=17%  Similarity=0.597  Sum_probs=8.6

Q ss_pred             CEEECCCCCCEEEECCCC
Q ss_conf             889988888213654676
Q gi|254780167|r   47 NEKHCPYCSTLYHFDSSL   64 (78)
Q Consensus        47 ~~v~C~YC~~~fv~~~~l   64 (78)
                      .+-.|++|++.|.....|
T Consensus        39 k~~~C~~C~k~F~~~~~L   56 (66)
T 2drp_A           39 KVYPCPFCFKEFTRKDNM   56 (66)
T ss_dssp             CCEECTTTCCEESCHHHH
T ss_pred             CCEECCCCCCEECCHHHH
T ss_conf             580898989980898899


No 81 
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.13  E-value=11  Score=17.92  Aligned_cols=21  Identities=24%  Similarity=0.588  Sum_probs=17.3

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|.....|.
T Consensus         9 GEKpy~C~~CgK~F~~~~~L~   29 (46)
T 2eme_A            9 GEKPYVCDYCGKAFGLSAELV   29 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHH
T ss_pred             CCCCEECCCCCCEECCHHHHH
T ss_conf             988978999998608899999


No 82 
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.12  E-value=35  Score=15.26  Aligned_cols=20  Identities=20%  Similarity=0.614  Sum_probs=13.5

Q ss_pred             CCEEECCCCCCEEEECCCCC
Q ss_conf             98899888882136546768
Q gi|254780167|r   46 ENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        46 ~~~v~C~YC~~~fv~~~~l~   65 (78)
                      +..-.|..|++.|.....|.
T Consensus        16 ek~~~C~~Cgk~F~~~~~l~   35 (73)
T 2ctu_A           16 DRSQKCSKCGIIFIRRSTLS   35 (73)
T ss_dssp             CSEEECSSSCCEEECCCCCC
T ss_pred             CCCEECCCCCCCCCCCCCCC
T ss_conf             98812884552542034213


No 83 
>2i3h_A Baculoviral IAP repeat-containing protein 7; zinc binding, peptide complex, apoptosis inhibition, peptidomimetic, small molecule, drug design, inhibitor/apoptosis complex; HET: BTB; 1.62A {Homo sapiens} SCOP: g.52.1.1 PDB: 2i3i_A* 3f7h_A* 3f7i_A* 3gt9_A* 3gta_A* 1tw6_A* 3f7g_A* 1oxn_A* 1oxq_A* 1oy7_A*
Probab=27.11  E-value=31  Score=15.57  Aligned_cols=20  Identities=20%  Similarity=0.629  Sum_probs=14.9

Q ss_pred             EEECCCCCEEECCCCCCEEE
Q ss_conf             99959998899888882136
Q gi|254780167|r   40 FINMGEENEKHCPYCSTLYH   59 (78)
Q Consensus        40 ~l~l~~~~~v~C~YC~~~fv   59 (78)
                      |+-.+.+..+.|-||+....
T Consensus        74 FYYtG~~D~V~Cf~C~~~L~   93 (133)
T 2i3h_A           74 FFHTGHQDKVRCFFCYGGLQ   93 (133)
T ss_dssp             EEECSSTTCEEETTTCCEEE
T ss_pred             CEECCCCCEEEECCCCCCCC
T ss_conf             98829999689467788927


No 84 
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=27.00  E-value=11  Score=18.08  Aligned_cols=20  Identities=20%  Similarity=0.360  Sum_probs=14.4

Q ss_pred             CCEEECCCCCCEEEECCCCC
Q ss_conf             98899888882136546768
Q gi|254780167|r   46 ENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        46 ~~~v~C~YC~~~fv~~~~l~   65 (78)
                      +.+-.|++|++.|.....|.
T Consensus        28 ~k~~~C~~C~~~F~~~~~l~   47 (60)
T 2adr_A           28 EKPYPCGLCNRAFTRRDLLI   47 (60)
T ss_dssp             SCSEECTTTCCEESSHHHHH
T ss_pred             CCCEECCCCCCEECCHHHHH
T ss_conf             88847898989948889999


No 85 
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=26.93  E-value=7.9  Score=18.81  Aligned_cols=15  Identities=27%  Similarity=0.684  Sum_probs=12.3

Q ss_pred             ECCCCCCEEEECCCC
Q ss_conf             988888213654676
Q gi|254780167|r   50 HCPYCSTLYHFDSSL   64 (78)
Q Consensus        50 ~C~YC~~~fv~~~~l   64 (78)
                      .|+.|+++|.....|
T Consensus         4 ~C~~C~k~FsRSDhL   18 (33)
T 1rim_A            4 ACPECPKRFMRSDHL   18 (33)
T ss_dssp             CCSSSCCCCSSHHHH
T ss_pred             CCCCCCCCCCHHHHH
T ss_conf             787777731437889


No 86 
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.85  E-value=4.8  Score=20.00  Aligned_cols=21  Identities=24%  Similarity=0.428  Sum_probs=17.0

Q ss_pred             CCEEECCCCCCEEEECCCCCC
Q ss_conf             988998888821365467684
Q gi|254780167|r   46 ENEKHCPYCSTLYHFDSSLDS   66 (78)
Q Consensus        46 ~~~v~C~YC~~~fv~~~~l~~   66 (78)
                      +.+-.|..|++.|...+.|..
T Consensus         9 EKPy~C~~Cgk~F~~~~~L~~   29 (42)
T 2ytb_A            9 EKPYRCDQCGKAFSQKGSLIV   29 (42)
T ss_dssp             CCSBCCTTTTCCBSSHHHHHT
T ss_pred             CCCEECCCCCCCCCCHHHHHH
T ss_conf             899789998886486678898


No 87 
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.42  E-value=12  Score=17.83  Aligned_cols=21  Identities=24%  Similarity=0.392  Sum_probs=17.3

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|...+.|.
T Consensus         9 GeKPy~C~~Cgk~F~~~s~L~   29 (46)
T 2em4_A            9 GQRPYECIECGKAFKTKSSLI   29 (46)
T ss_dssp             CSSSEECSSSCCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             997957898888748667878


No 88 
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.23  E-value=12  Score=17.83  Aligned_cols=21  Identities=29%  Similarity=0.449  Sum_probs=17.3

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|.+|++.|.....|.
T Consensus         9 geKpy~C~~C~k~F~~~~~L~   29 (46)
T 2em8_A            9 GEKPYKCVECGKGYKRRLDLD   29 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             998808998897847569999


No 89 
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=26.01  E-value=29  Score=15.74  Aligned_cols=31  Identities=32%  Similarity=0.602  Sum_probs=24.5

Q ss_pred             ECCCCCCCCCEEEEECCCCCEEECCCCCCEE
Q ss_conf             3789988986799995999889988888213
Q gi|254780167|r   28 AGTSPPLDHPHVFINMGEENEKHCPYCSTLY   58 (78)
Q Consensus        28 dGg~g~lgHP~V~l~l~~~~~v~C~YC~~~f   58 (78)
                      .|..+.+..||.|....-.....|-+|++.-
T Consensus         3 sg~~~k~~~pH~F~~~~~~~~~~C~~C~~~i   33 (65)
T 2enz_A            3 SGSSGKIDMPHRFKVYNYKSPTFCEHCGTLL   33 (65)
T ss_dssp             SSCCCCCCCCCCEEECCCCSCCBCSSSCCBC
T ss_pred             CCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
T ss_conf             8868878887356765489997984568703


No 90 
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.78  E-value=8  Score=18.78  Aligned_cols=22  Identities=14%  Similarity=0.386  Sum_probs=17.7

Q ss_pred             CCCEEECCCCCCEEEECCCCCC
Q ss_conf             9988998888821365467684
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLDS   66 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~~   66 (78)
                      .+.+-.|..|++.|.....|+.
T Consensus         9 GeKpy~C~~C~k~F~~~~~L~~   30 (45)
T 2epu_A            9 GQKPFECTHCGKSFRAKGNLVT   30 (45)
T ss_dssp             SCCSEEETTTTEEESSHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCHHHHHH
T ss_conf             9988389988988486176887


No 91 
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=25.68  E-value=13  Score=17.70  Aligned_cols=17  Identities=24%  Similarity=0.594  Sum_probs=13.2

Q ss_pred             EEECCCCCCEEEECCCC
Q ss_conf             89988888213654676
Q gi|254780167|r   48 EKHCPYCSTLYHFDSSL   64 (78)
Q Consensus        48 ~v~C~YC~~~fv~~~~l   64 (78)
                      ..+|.||+.+|-.+-++
T Consensus        13 ~~eC~~C~vkYs~~~sv   29 (55)
T 2yrk_A           13 KPECTLCGVKYSARLSI   29 (55)
T ss_dssp             CSCCTTTTCCCCSSSCH
T ss_pred             CCCCCCCCEEECCCCCH
T ss_conf             45377446130564333


No 92 
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=25.63  E-value=30  Score=15.66  Aligned_cols=29  Identities=21%  Similarity=0.537  Sum_probs=17.2

Q ss_pred             CCEEECCCCCCEEEECCCCCC-CCCCCCCCEE
Q ss_conf             988998888821365467684-4468800246
Q gi|254780167|r   46 ENEKHCPYCSTLYHFDSSLDS-KETLPVGCLL   76 (78)
Q Consensus        46 ~~~v~C~YC~~~fv~~~~l~~-~es~P~~c~~   76 (78)
                      .+.-.|..|+  |+|++.... ....||+-.|
T Consensus         5 ~~ky~C~~Cg--yiYDp~~Gd~~~gIppGT~F   34 (70)
T 1dx8_A            5 EGKYECEACG--YIYEPEKGDKFAGIPPGTPF   34 (70)
T ss_dssp             SSCEEETTTC--CEECTTTCCTTTTCCSSCCG
T ss_pred             CCCEEECCCC--EEECCCCCCCCCCCCCCCCH
T ss_conf             8847819999--08786667846687988996


No 93 
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.40  E-value=6.7  Score=19.21  Aligned_cols=21  Identities=24%  Similarity=0.339  Sum_probs=16.8

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|.....|.
T Consensus         9 geKpy~C~~C~k~F~~~~~L~   29 (46)
T 2emz_A            9 GERPFKCNECGKGFGRRSHLA   29 (46)
T ss_dssp             CCCSCCCSSSCCCCSSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             988968998898848889999


No 94 
>2qra_D XIAP, baculoviral IAP repeat-containing protein 4, inhibitor; apoptosis, signaling protein, zinc binding; 2.50A {Homo sapiens}
Probab=25.26  E-value=32  Score=15.50  Aligned_cols=20  Identities=25%  Similarity=0.567  Sum_probs=15.5

Q ss_pred             EEECCCCCEEECCCCCCEEE
Q ss_conf             99959998899888882136
Q gi|254780167|r   40 FINMGEENEKHCPYCSTLYH   59 (78)
Q Consensus        40 ~l~l~~~~~v~C~YC~~~fv   59 (78)
                      |+-.+....+.|.||+....
T Consensus        64 FYYtG~~D~V~Cf~C~~~l~   83 (111)
T 2qra_D           64 FLYTGEGDTVRCFSCHAAVD   83 (111)
T ss_dssp             EEECSSTTCEEETTTCCEEC
T ss_pred             EEEECCCCEEEECCCCCEEC
T ss_conf             39818999789576688945


No 95 
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.81  E-value=14  Score=17.47  Aligned_cols=21  Identities=19%  Similarity=0.332  Sum_probs=17.4

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|...+.|.
T Consensus         9 geKpy~C~~CgK~F~~~s~L~   29 (46)
T 2em7_A            9 GEKPYKCEECGKGFICRRDLY   29 (46)
T ss_dssp             CCCSEECSSSCCEESCHHHHH
T ss_pred             CCCCEECCCCCCEECCHHHHH
T ss_conf             988978899898618678899


No 96 
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.43  E-value=14  Score=17.37  Aligned_cols=21  Identities=29%  Similarity=0.501  Sum_probs=17.4

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|...+.|.
T Consensus         9 GeKpy~C~~Cgk~F~~~s~L~   29 (46)
T 2eow_A            9 GEKPYKCNECGKAFRARSSLA   29 (46)
T ss_dssp             CCCCEECTTSCCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             996967899899618879999


No 97 
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=23.96  E-value=8.6  Score=18.61  Aligned_cols=22  Identities=23%  Similarity=0.378  Sum_probs=17.5

Q ss_pred             CCCEEECCCCCCEEEECCCCCC
Q ss_conf             9988998888821365467684
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLDS   66 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~~   66 (78)
                      .+++-.|..|++.|.....|+.
T Consensus         9 GeKpy~C~~Cgk~F~~~~~L~~   30 (46)
T 2ely_A            9 GEKPFKCVECGKGFSRRSALNV   30 (46)
T ss_dssp             CCCSBCCSSSCCCBSSTTHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHHH
T ss_conf             9979288999995377899999


No 98 
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=23.95  E-value=15  Score=17.30  Aligned_cols=17  Identities=24%  Similarity=0.307  Sum_probs=8.7

Q ss_pred             EEECCCCCCEEEECCCC
Q ss_conf             89988888213654676
Q gi|254780167|r   48 EKHCPYCSTLYHFDSSL   64 (78)
Q Consensus        48 ~v~C~YC~~~fv~~~~l   64 (78)
                      .-.|++|+..|.....|
T Consensus        50 ~y~C~~C~~~f~~~~~L   66 (102)
T 2ghf_A           50 SYVCVECNFLTKRYDAL   66 (102)
T ss_dssp             CEEETTTTEEESSTHHH
T ss_pred             CCCCCCCCCEECCHHHH
T ss_conf             87989999840857997


No 99 
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.73  E-value=14  Score=17.43  Aligned_cols=22  Identities=27%  Similarity=0.551  Sum_probs=17.6

Q ss_pred             CCCEEECCCCCCEEEECCCCCC
Q ss_conf             9988998888821365467684
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLDS   66 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~~   66 (78)
                      .+.+-.|..|++.|.....|..
T Consensus         9 GEKpy~C~~Cgk~F~~~~~L~~   30 (46)
T 2eor_A            9 GEKPYNCEECGKAFIHDSQLQE   30 (46)
T ss_dssp             CCCSEECTTTCCEESSHHHHHH
T ss_pred             CCCCEECCCCCCEECCHHHHHH
T ss_conf             9979589998986386599999


No 100
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.69  E-value=8.1  Score=18.76  Aligned_cols=21  Identities=19%  Similarity=0.357  Sum_probs=16.9

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|.+|++.|.....|.
T Consensus         9 gekpy~C~~Cgk~F~~~~~L~   29 (47)
T 2epx_A            9 GKKPYECIECGKAFIQNTSLI   29 (47)
T ss_dssp             CCCSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCEECCCCCCEECCHHHHH
T ss_conf             998948999999938668999


No 101
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.69  E-value=15  Score=17.31  Aligned_cols=21  Identities=24%  Similarity=0.376  Sum_probs=17.4

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|...+.|.
T Consensus         9 GEKpy~C~~Cgk~F~~~s~L~   29 (46)
T 2emy_A            9 GENPYECHECGKAFSRKYQLI   29 (46)
T ss_dssp             SSCCEECSSSCCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             998958899888508789999


No 102
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3
Probab=23.63  E-value=24  Score=16.21  Aligned_cols=14  Identities=14%  Similarity=0.634  Sum_probs=11.1

Q ss_pred             CEEECCCCCCEEEE
Q ss_conf             88998888821365
Q gi|254780167|r   47 NEKHCPYCSTLYHF   60 (78)
Q Consensus        47 ~~v~C~YC~~~fv~   60 (78)
                      ..-.|.+|++.|.-
T Consensus         5 r~~~C~~C~k~F~s   18 (39)
T 1njq_A            5 RSYTCSFCKREFRS   18 (39)
T ss_dssp             SSEECTTTCCEESS
T ss_pred             CCEECCCCCCCCCC
T ss_conf             75098998898478


No 103
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=23.38  E-value=9.7  Score=18.32  Aligned_cols=22  Identities=14%  Similarity=0.419  Sum_probs=17.6

Q ss_pred             CCCEEECCCCCCEEEECCCCCC
Q ss_conf             9988998888821365467684
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLDS   66 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~~   66 (78)
                      .+++-.|..|++.|.....|+-
T Consensus         9 ~eKpy~C~~CgK~F~~~s~L~~   30 (48)
T 2epr_A            9 TRKQVACEICGKIFRDVYHLNR   30 (48)
T ss_dssp             CCCSEEETTTTEEESSHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCHHHHHH
T ss_conf             9968288989977487689899


No 104
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.33  E-value=6.5  Score=19.27  Aligned_cols=21  Identities=19%  Similarity=0.256  Sum_probs=16.7

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|.+|++.|.....|.
T Consensus         9 geKpy~C~~Cgk~F~~~s~L~   29 (44)
T 2en7_A            9 GMKPYVCNECGKAFRSKSYLI   29 (44)
T ss_dssp             SSSSSCCTTTCCCCSSHHHHH
T ss_pred             CCCCCCCCCCCCCCCCHHHHH
T ss_conf             998818899989978778989


No 105
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.25  E-value=15  Score=17.28  Aligned_cols=20  Identities=20%  Similarity=0.454  Sum_probs=16.9

Q ss_pred             CCEEECCCCCCEEEECCCCC
Q ss_conf             98899888882136546768
Q gi|254780167|r   46 ENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        46 ~~~v~C~YC~~~fv~~~~l~   65 (78)
                      +++-.|..|++.|...+.|.
T Consensus        10 EKpy~C~~Cgk~F~~~s~L~   29 (46)
T 2em2_A           10 EKPFKCKECGKAFRQNIHLA   29 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHH
T ss_pred             CCCEECCCCCCCCCCHHHHH
T ss_conf             98979999899638779999


No 106
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.19  E-value=12  Score=17.76  Aligned_cols=21  Identities=24%  Similarity=0.444  Sum_probs=17.4

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|.....|+
T Consensus         9 GEKpy~C~~C~K~F~~~~~L~   29 (46)
T 2ytf_A            9 GEKPFECSECQKAFNTKSNLI   29 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             967988999899868888999


No 107
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.97  E-value=15  Score=17.23  Aligned_cols=21  Identities=24%  Similarity=0.594  Sum_probs=17.3

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|.....|.
T Consensus         9 geKpy~C~~C~k~F~~~~~L~   29 (46)
T 2ytd_A            9 GEKPYKCSECGKAFHRHTHLN   29 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             959968999998847768888


No 108
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=22.90  E-value=21  Score=16.49  Aligned_cols=16  Identities=13%  Similarity=0.526  Sum_probs=12.4

Q ss_pred             EEECCCCCCEEEECCC
Q ss_conf             8998888821365467
Q gi|254780167|r   48 EKHCPYCSTLYHFDSS   63 (78)
Q Consensus        48 ~v~C~YC~~~fv~~~~   63 (78)
                      +-.|.-||++|-++..
T Consensus         3 py~c~~c~krfslkhq   18 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQ   18 (28)
T ss_dssp             SEECSSSCCEESCHHH
T ss_pred             CCCCCCCCCCCCHHHH
T ss_conf             6301643330011343


No 109
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.76  E-value=33  Score=15.42  Aligned_cols=21  Identities=24%  Similarity=0.710  Sum_probs=14.0

Q ss_pred             CCEEECCCCCCEEEECCCCCC
Q ss_conf             988998888821365467684
Q gi|254780167|r   46 ENEKHCPYCSTLYHFDSSLDS   66 (78)
Q Consensus        46 ~~~v~C~YC~~~fv~~~~l~~   66 (78)
                      ...+.|.||+..|.++.--..
T Consensus         8 kR~v~C~~C~~~~~~~~~~~H   28 (66)
T 2eod_A            8 KRTQPCTYCTKEFVFDTIQSH   28 (66)
T ss_dssp             CCEEECSSSCCEEEHHHHHHH
T ss_pred             CCCCCCCCCCCCCCHHHHHHH
T ss_conf             826659999881158899999


No 110
>2poi_A Baculoviral IAP repeat-containing protein 4; zinc finger, signaling protein/apoptosis complex; 1.80A {Homo sapiens} PDB: 2pop_B
Probab=22.76  E-value=38  Score=15.08  Aligned_cols=19  Identities=21%  Similarity=0.475  Sum_probs=14.1

Q ss_pred             EECCCCCEEECCCCCCEEE
Q ss_conf             9959998899888882136
Q gi|254780167|r   41 INMGEENEKHCPYCSTLYH   59 (78)
Q Consensus        41 l~l~~~~~v~C~YC~~~fv   59 (78)
                      +=.+....+.|.||+....
T Consensus        48 yytg~~D~V~Cf~C~~~l~   66 (94)
T 2poi_A           48 LYTGEGDTVRCFSCHAAVD   66 (94)
T ss_dssp             EECSSTTCEEETTTCCEEC
T ss_pred             EECCCCCEEEECCCCCEEC
T ss_conf             8879998789486688937


No 111
>3m1d_A Baculoviral IAP repeat-containing protein 2; BIR, apoptosis, cytoplasm, polymorphism, zinc, zinc-FIN metal binding protein; 2.00A {Homo sapiens} PDB: 3m0a_D 3m0d_D
Probab=22.64  E-value=38  Score=15.05  Aligned_cols=20  Identities=20%  Similarity=0.554  Sum_probs=14.2

Q ss_pred             EEECCCCCEEECCCCCCEEE
Q ss_conf             99959998899888882136
Q gi|254780167|r   40 FINMGEENEKHCPYCSTLYH   59 (78)
Q Consensus        40 ~l~l~~~~~v~C~YC~~~fv   59 (78)
                      |+-.+.+..+.|.||+....
T Consensus        38 Fyytg~~D~v~Cf~C~~~l~   57 (85)
T 3m1d_A           38 FYYTGVNDKVKCFCCGLMLD   57 (85)
T ss_dssp             EEECSSTTCEEETTTCCEEC
T ss_pred             CEECCCCCEEEECCCCCEEC
T ss_conf             88879999889596988913


No 112
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=22.57  E-value=26  Score=15.96  Aligned_cols=19  Identities=26%  Similarity=0.466  Sum_probs=9.9

Q ss_pred             CCEEECCCCCCEEEECCCC
Q ss_conf             9889988888213654676
Q gi|254780167|r   46 ENEKHCPYCSTLYHFDSSL   64 (78)
Q Consensus        46 ~~~v~C~YC~~~fv~~~~l   64 (78)
                      .+.-.|-||+..-+-+.+.
T Consensus        37 ~~~F~C~~C~~el~ed~s~   55 (62)
T 1vd4_A           37 TGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             TTEEBCSSSCCBCEECTTC
T ss_pred             CCEEEECCCCCEEECCCCC
T ss_conf             8919736889996557753


No 113
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.53  E-value=15  Score=17.21  Aligned_cols=22  Identities=23%  Similarity=0.386  Sum_probs=17.8

Q ss_pred             CCCEEECCCCCCEEEECCCCCC
Q ss_conf             9988998888821365467684
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLDS   66 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~~   66 (78)
                      .+++-.|..|++.|...+.|..
T Consensus         9 GeKpy~C~~Cgk~F~~~~~L~~   30 (46)
T 2yts_A            9 GEKPYICNECGKSFIQKSHLNR   30 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHHHH
T ss_pred             CCCCEECCCCCCEECCHHHHHH
T ss_conf             9979589999983078899999


No 114
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.51  E-value=9  Score=18.51  Aligned_cols=20  Identities=25%  Similarity=0.577  Sum_probs=16.7

Q ss_pred             CCEEECCCCCCEEEECCCCC
Q ss_conf             98899888882136546768
Q gi|254780167|r   46 ENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        46 ~~~v~C~YC~~~fv~~~~l~   65 (78)
                      +.+-.|..|++.|.....|.
T Consensus        10 ekpy~C~~C~K~F~~~s~L~   29 (46)
T 2enh_A           10 EKPYECDVCRKAFSHHASLT   29 (46)
T ss_dssp             SSSCBCTTTCCBCSSSHHHH
T ss_pred             CCCEECCCCCCEECCHHHHH
T ss_conf             88958898699708678978


No 115
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.47  E-value=17  Score=17.04  Aligned_cols=21  Identities=24%  Similarity=0.490  Sum_probs=17.2

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|...+.|.
T Consensus         9 Gekpy~C~~CgK~F~~~s~L~   29 (46)
T 2emi_A            9 GERHYECSECGKAFIQKSTLS   29 (46)
T ss_dssp             SCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             998928999998748678867


No 116
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=22.47  E-value=7.1  Score=19.06  Aligned_cols=21  Identities=29%  Similarity=0.453  Sum_probs=16.9

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|..|++.|.+...|.
T Consensus         9 GeKpy~C~~C~k~F~~~~~L~   29 (46)
T 2em0_A            9 GEKTWKCRECDMCFSQASSLR   29 (46)
T ss_dssp             CCCCCCCSSSCCCCSSHHHHH
T ss_pred             CCCCEECCCCCCEECCHHHHH
T ss_conf             987959999898727789999


No 117
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=22.46  E-value=29  Score=15.68  Aligned_cols=24  Identities=21%  Similarity=0.540  Sum_probs=14.6

Q ss_pred             EECCCCCCEEEECCCCCCC-CCCCCCC
Q ss_conf             9988888213654676844-4688002
Q gi|254780167|r   49 KHCPYCSTLYHFDSSLDSK-ETLPVGC   74 (78)
Q Consensus        49 v~C~YC~~~fv~~~~l~~~-es~P~~c   74 (78)
                      -.|..|+  |+|++..... +..||+-
T Consensus         4 y~C~~Cg--yiYdp~~Gd~~~gi~pGT   28 (54)
T 4rxn_A            4 YTCTVCG--YIYDPEDGDPDDGVNPGT   28 (54)
T ss_dssp             EEETTTC--CEECTTTCBGGGTBCTTC
T ss_pred             EECCCCC--CEECCCCCCCCCCCCCCC
T ss_conf             5939999--087755488456879899


No 118
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.37  E-value=8.4  Score=18.65  Aligned_cols=20  Identities=25%  Similarity=0.537  Sum_probs=16.7

Q ss_pred             CCEEECCCCCCEEEECCCCC
Q ss_conf             98899888882136546768
Q gi|254780167|r   46 ENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        46 ~~~v~C~YC~~~fv~~~~l~   65 (78)
                      +++-.|..|++.|.....|.
T Consensus        10 EKpy~C~~Cgk~F~~~s~L~   29 (46)
T 2emg_A           10 ENPFICSECGKVFTHKTNLI   29 (46)
T ss_dssp             CCSCBCTTTCCBCSSHHHHH
T ss_pred             CCCEECCCCCCCCCCHHHHH
T ss_conf             98938999989738778889


No 119
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=22.27  E-value=16  Score=17.11  Aligned_cols=22  Identities=23%  Similarity=0.481  Sum_probs=17.8

Q ss_pred             CCCEEECCCCCCEEEECCCCCC
Q ss_conf             9988998888821365467684
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLDS   66 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~~   66 (78)
                      .+++-.|.-|++.|...+.|..
T Consensus         9 Gekpy~C~~Cgk~F~~~s~L~~   30 (46)
T 2em9_A            9 GEKPYNCKECGKSFRWASCLLK   30 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHH
T ss_pred             CCCCEECCCCCCEECCHHHHHH
T ss_conf             9889678987997088899999


No 120
>2vm5_A Baculoviral IAP repeat-containing protein 1; baculoviral inhibitor of apoptosis repeat-containing 1, BIR2, BIRC1, apoptosis, polymorphism; 1.80A {Homo sapiens}
Probab=22.24  E-value=43  Score=14.76  Aligned_cols=20  Identities=20%  Similarity=0.521  Sum_probs=15.4

Q ss_pred             EEECCCCCEEECCCCCCEEE
Q ss_conf             99959998899888882136
Q gi|254780167|r   40 FINMGEENEKHCPYCSTLYH   59 (78)
Q Consensus        40 ~l~l~~~~~v~C~YC~~~fv   59 (78)
                      |+-.|.+..+.|-||+....
T Consensus        48 Fyytg~~D~v~Cf~C~~~l~   67 (106)
T 2vm5_A           48 FVFTGKQDTVQCFSCGGCLG   67 (106)
T ss_dssp             EEECSSTTCEEETTTCCEEE
T ss_pred             CEECCCCCCEEECCCCCEEC
T ss_conf             47889997169531698914


No 121
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, electron transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=22.07  E-value=28  Score=15.77  Aligned_cols=25  Identities=28%  Similarity=0.743  Sum_probs=14.6

Q ss_pred             EEECCCCCCEEEECCCCCC-CCCCCCCC
Q ss_conf             8998888821365467684-44688002
Q gi|254780167|r   48 EKHCPYCSTLYHFDSSLDS-KETLPVGC   74 (78)
Q Consensus        48 ~v~C~YC~~~fv~~~~l~~-~es~P~~c   74 (78)
                      .-.|..|+  |+|++.... .+..||+-
T Consensus         3 ~y~C~~Cg--yiYd~~~Gd~~~~i~pGT   28 (55)
T 2v3b_B            3 KWQCVVCG--FIYDEALGLPEEGIPAGT   28 (55)
T ss_dssp             EEEETTTC--CEEETTTCBTTTTBCTTC
T ss_pred             CEECCCCC--EEECCCCCCCCCCCCCCC
T ss_conf             76929999--188855588456869899


No 122
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.99  E-value=9.3  Score=18.41  Aligned_cols=16  Identities=31%  Similarity=0.754  Sum_probs=10.1

Q ss_pred             CCCCCEEECCCCCCEE
Q ss_conf             5999889988888213
Q gi|254780167|r   43 MGEENEKHCPYCSTLY   58 (78)
Q Consensus        43 l~~~~~v~C~YC~~~f   58 (78)
                      +.+.+...|++|++.|
T Consensus        19 ~~~~~~~~C~~C~k~~   34 (98)
T 2gqj_A           19 IHERGEAVCPTCNVVT   34 (98)
T ss_dssp             TTTTSCCCCTTTCCCC
T ss_pred             HCCCCCEECCCCCEEE
T ss_conf             3389898999999730


No 123
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.90  E-value=8.5  Score=18.62  Aligned_cols=21  Identities=24%  Similarity=0.531  Sum_probs=17.1

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|..|++.|...+.|.
T Consensus         9 GeKpy~C~~Cgk~F~~~s~L~   29 (46)
T 2eoe_A            9 GEKPYKCNECGKVFTQNSHLA   29 (46)
T ss_dssp             CCCSSEETTTTEECSSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             997938899999968889999


No 124
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.65  E-value=7  Score=19.09  Aligned_cols=22  Identities=27%  Similarity=0.487  Sum_probs=17.3

Q ss_pred             CCCEEECCCCCCEEEECCCCCC
Q ss_conf             9988998888821365467684
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLDS   66 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~~   66 (78)
                      .+.+-.|..|++.|.+...|+.
T Consensus         9 GEkpy~C~~Cgk~F~~~s~L~~   30 (46)
T 2yth_A            9 GEKPFQCEECGKRFTQNSHLHS   30 (46)
T ss_dssp             CSSSBCCSSSCCCBSSHHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHHH
T ss_conf             9889699999899788899999


No 125
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=21.45  E-value=30  Score=15.64  Aligned_cols=15  Identities=20%  Similarity=0.505  Sum_probs=11.7

Q ss_pred             CCEEECCCCCCEEEE
Q ss_conf             988998888821365
Q gi|254780167|r   46 ENEKHCPYCSTLYHF   60 (78)
Q Consensus        46 ~~~v~C~YC~~~fv~   60 (78)
                      ...+.|||||-.|.-
T Consensus       276 ~~~v~Cp~cgA~y~~  290 (320)
T 3mkr_B          276 KPVEKCPLSGACYSP  290 (320)
T ss_dssp             SCCEECTTTCCEECG
T ss_pred             CCCCCCCCCCCEECH
T ss_conf             997045897886257


No 126
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.35  E-value=17  Score=17.01  Aligned_cols=21  Identities=14%  Similarity=0.327  Sum_probs=17.4

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+++-.|.-|++.|.....|.
T Consensus         9 geKPy~C~~CgK~F~~~s~L~   29 (44)
T 2eox_A            9 DSKSYNCNECGKAFTRIFHLT   29 (44)
T ss_dssp             CCCCEEETTTTEEESSSHHHH
T ss_pred             CCCCEECCCCCCEECCHHHHH
T ss_conf             984948989888408648899


No 127
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.25  E-value=7.8  Score=18.85  Aligned_cols=21  Identities=19%  Similarity=0.317  Sum_probs=16.9

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|..|++.|.....|+
T Consensus         9 gekpy~C~~C~k~F~~~~~l~   29 (46)
T 2eq4_A            9 GEKLYNCKECGKSFSRAPCLL   29 (46)
T ss_dssp             CCCCCCBTTTTBCCSCHHHHH
T ss_pred             CCCCCCCCCCCCCCCCHHHHH
T ss_conf             968828998898968678999


No 128
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.16  E-value=27  Score=15.90  Aligned_cols=14  Identities=14%  Similarity=0.330  Sum_probs=7.5

Q ss_pred             CEEECCCCCCEEEE
Q ss_conf             88998888821365
Q gi|254780167|r   47 NEKHCPYCSTLYHF   60 (78)
Q Consensus        47 ~~v~C~YC~~~fv~   60 (78)
                      ..+.|+||+..|..
T Consensus        42 ~~~~C~~C~~~~~r   55 (75)
T 2d9k_A           42 RTELCGNCGRNVLV   55 (75)
T ss_dssp             CEEECSSSCCEEET
T ss_pred             CCEECCCCCEECCH
T ss_conf             77748986928528


No 129
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.11  E-value=15  Score=17.23  Aligned_cols=19  Identities=21%  Similarity=0.585  Sum_probs=15.5

Q ss_pred             CEEECCCCCCEEEECCCCC
Q ss_conf             8899888882136546768
Q gi|254780167|r   47 NEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        47 ~~v~C~YC~~~fv~~~~l~   65 (78)
                      .--.|..|++.|.....|.
T Consensus        11 ~~YkC~~CgK~F~~~s~L~   29 (46)
T 2em5_A           11 KSHQCHECGRGFTLKSHLN   29 (46)
T ss_dssp             CSEECSSSCCEESSHHHHH
T ss_pred             CCEECCCCCCCCCCHHHHH
T ss_conf             6268897988888857856


No 130
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.90  E-value=11  Score=17.94  Aligned_cols=21  Identities=19%  Similarity=0.537  Sum_probs=17.5

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|..|++.|...+.|+
T Consensus         9 geKpy~C~~Cgk~F~~~s~l~   29 (46)
T 2eoz_A            9 GEKPYSCNVCGKAFVLSAHLN   29 (46)
T ss_dssp             SCCSEEETTTTEEESSHHHHH
T ss_pred             CCCCCCCCCCCCCCCCHHHHH
T ss_conf             978818998997748889999


No 131
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A 1rwd_A 1qcv_A 2pve_A 2pvx_A ...
Probab=20.83  E-value=34  Score=15.37  Aligned_cols=25  Identities=20%  Similarity=0.525  Sum_probs=14.6

Q ss_pred             EECCCCCCEEEECCCCC-CCCCCCCCCE
Q ss_conf             99888882136546768-4446880024
Q gi|254780167|r   49 KHCPYCSTLYHFDSSLD-SKETLPVGCL   75 (78)
Q Consensus        49 v~C~YC~~~fv~~~~l~-~~es~P~~c~   75 (78)
                      -.|.-|+  |+|++... +.+..||+-.
T Consensus         3 y~C~~Cg--yiYdp~~Gd~~~~i~pGT~   28 (52)
T 1yk4_A            3 LSCKICG--YIYDEDEGDPDNGISPGTK   28 (52)
T ss_dssp             EEESSSS--CEEETTTCBGGGTBCTTCC
T ss_pred             CCCCCCC--EEECCCCCCCCCCCCCCCC
T ss_conf             4869999--3888766884668699999


No 132
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.82  E-value=9.7  Score=18.31  Aligned_cols=21  Identities=29%  Similarity=0.613  Sum_probs=17.0

Q ss_pred             CCCEEECCCCCCEEEECCCCC
Q ss_conf             998899888882136546768
Q gi|254780167|r   45 EENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        45 ~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      .+.+-.|..|++.|...+.|.
T Consensus         9 GEKpy~C~~CgK~F~~~s~L~   29 (46)
T 2eop_A            9 GEKPHECRECGKSFSFNSQLI   29 (46)
T ss_dssp             CCCSCBCTTTCCBCSSHHHHH
T ss_pred             CCCCEECCCCCCCCCCHHHHH
T ss_conf             997918899989987568876


No 133
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=20.61  E-value=15  Score=17.33  Aligned_cols=19  Identities=32%  Similarity=0.496  Sum_probs=10.0

Q ss_pred             CCEEECCCCCCEEEECCCC
Q ss_conf             9889988888213654676
Q gi|254780167|r   46 ENEKHCPYCSTLYHFDSSL   64 (78)
Q Consensus        46 ~~~v~C~YC~~~fv~~~~l   64 (78)
                      +.+-.|.+|+..|.....|
T Consensus        35 ~kpy~C~~C~~~f~~~~~L   53 (70)
T 1x5w_A           35 DRPFKCNYCSFDTKQPSNL   53 (70)
T ss_dssp             SCSEECSSSSCEESSHHHH
T ss_pred             CCCEECCCCCCEECCHHHH
T ss_conf             9782789778874888899


No 134
>3hl5_A Baculoviral IAP repeat-containing protein 4; BIR, apoptosis, small molecule drug discovery, structure-based drug design, cytoplasm, ligase; HET: 9JZ; 1.80A {Homo sapiens} PDB: 1nw9_A 2vsl_A
Probab=20.44  E-value=45  Score=14.66  Aligned_cols=20  Identities=25%  Similarity=0.536  Sum_probs=14.9

Q ss_pred             EEECCCCCEEECCCCCCEEE
Q ss_conf             99959998899888882136
Q gi|254780167|r   40 FINMGEENEKHCPYCSTLYH   59 (78)
Q Consensus        40 ~l~l~~~~~v~C~YC~~~fv   59 (78)
                      |+-.+....+.|-||+....
T Consensus        38 Fyytg~~D~v~Cf~C~~~l~   57 (95)
T 3hl5_A           38 FYALGEGDKVKCFHCGGGLT   57 (95)
T ss_dssp             EEECSSTTCEEETTTCCEEC
T ss_pred             CEECCCCCEEEECCCCCCCC
T ss_conf             87879898789585688925


No 135
>2vy4_A U11/U12 small nuclear ribonucleoprotein 48 kDa protein; splicing, mRNA processing, alternative splicing, transcription, nucleus, spliceosome; NMR {Homo sapiens} SCOP: g.37.1.7 PDB: 2vy5_A
Probab=20.27  E-value=37  Score=15.11  Aligned_cols=22  Identities=36%  Similarity=0.461  Sum_probs=15.7

Q ss_pred             CCCCEEECCCCCCEEEECCCCC
Q ss_conf             9998899888882136546768
Q gi|254780167|r   44 GEENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        44 ~~~~~v~C~YC~~~fv~~~~l~   65 (78)
                      ++++.++|||=+-.-+-+++|.
T Consensus         1 ~~~e~v~CPyd~nHrmPksSLe   22 (37)
T 2vy4_A            1 GSDEVVICPYDSNHHMPKSSLA   22 (37)
T ss_dssp             CCCCCEECTTTSSCEECGGGHH
T ss_pred             CCCCEEECCCCCCCCCCHHHHH
T ss_conf             9885685776566747678899


No 136
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.21  E-value=15  Score=17.23  Aligned_cols=17  Identities=18%  Similarity=0.548  Sum_probs=10.9

Q ss_pred             EEECCCCCCEEEECCCC
Q ss_conf             89988888213654676
Q gi|254780167|r   48 EKHCPYCSTLYHFDSSL   64 (78)
Q Consensus        48 ~v~C~YC~~~fv~~~~l   64 (78)
                      .-.|.+|++.|.....|
T Consensus        38 ~~~C~~C~~~f~~~~~L   54 (78)
T 2d9h_A           38 RFPCEFCGKRFEKPDSV   54 (78)
T ss_dssp             CEECTTTCCEESSHHHH
T ss_pred             CEECCCCCCEECCHHHH
T ss_conf             54639979940799999


No 137
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.14  E-value=11  Score=18.12  Aligned_cols=20  Identities=25%  Similarity=0.476  Sum_probs=16.7

Q ss_pred             CCEEECCCCCCEEEECCCCC
Q ss_conf             98899888882136546768
Q gi|254780167|r   46 ENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        46 ~~~v~C~YC~~~fv~~~~l~   65 (78)
                      +++-.|..|++.|.....|.
T Consensus        10 eKPy~C~~C~K~F~~~s~L~   29 (46)
T 2em6_A           10 EKCYKCDVCGKEFSQSSHLQ   29 (46)
T ss_dssp             CCCCBCSSSCCBCSSHHHHH
T ss_pred             CCCEECCCCCCEECCHHHHH
T ss_conf             88938998887305778988


No 138
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.10  E-value=8.6  Score=18.59  Aligned_cols=20  Identities=25%  Similarity=0.469  Sum_probs=16.3

Q ss_pred             CCEEECCCCCCEEEECCCCC
Q ss_conf             98899888882136546768
Q gi|254780167|r   46 ENEKHCPYCSTLYHFDSSLD   65 (78)
Q Consensus        46 ~~~v~C~YC~~~fv~~~~l~   65 (78)
                      +.+-.|..|++.|...+.|.
T Consensus        10 EKpy~C~~CgK~F~~~s~L~   29 (46)
T 2ep1_A           10 EKPYECSDCGKSFIKKSQLH   29 (46)
T ss_dssp             CCSSCCSSSCCCCSSHHHHH
T ss_pred             CCCEECCCCCCCCCCHHHHH
T ss_conf             98968999999628789999


Done!