Query gi|254780167|ref|YP_003064580.1| hypothetical protein CLIBASIA_00250 [Candidatus Liberibacter asiaticus str. psy62] Match_columns 78 No_of_seqs 101 out of 207 Neff 3.6 Searched_HMMs 23785 Date Sun May 22 21:18:35 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780167.hhm -d /home/congqian_1/database/pdb/pdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 2jz8_A Uncharacterized protein 100.0 2.6E-35 1.1E-39 212.7 7.0 77 1-77 1-77 (87) 2 2jvm_A Uncharacterized protein 99.8 2.6E-20 1.1E-24 130.7 6.2 55 13-67 17-72 (80) 3 2jrr_A Uncharacterized protein 99.8 6.3E-20 2.6E-24 128.6 6.0 55 13-67 4-59 (67) 4 1v54_F VI, cytochrome C oxidas 95.8 0.0091 3.8E-07 34.9 4.5 45 16-62 45-93 (98) 5 2odx_A Cytochrome C oxidase po 95.5 0.016 6.5E-07 33.6 4.6 42 21-63 30-71 (80) 6 3na7_A HP0958; flagellar bioge 77.6 0.94 4E-05 23.9 2.0 55 14-71 190-245 (256) 7 3iuf_A Zinc finger protein UBI 75.1 0.47 2E-05 25.5 -0.0 23 43-65 2-24 (48) 8 2elp_A Zinc finger protein 406 68.6 1.1 4.8E-05 23.4 0.7 16 47-62 8-23 (37) 9 2els_A Zinc finger protein 406 65.8 1.1 4.8E-05 23.4 0.2 21 46-66 7-27 (36) 10 1vzy_A 33 kDa chaperonin; chap 61.2 3.1 0.00013 21.0 1.8 15 48-62 265-279 (291) 11 1vq0_A 33 kDa chaperonin; TM13 61.0 3.3 0.00014 20.9 1.9 16 47-62 271-286 (302) 12 1ncs_A Peptide M30F, transcrip 58.7 1.5 6.3E-05 22.7 -0.2 24 43-66 13-38 (47) 13 1i7f_A Heat shock protein 33; 55.8 2 8.2E-05 22.1 0.0 17 47-63 259-275 (292) 14 1va1_A Transcription factor SP 55.6 1.5 6.2E-05 22.8 -0.7 22 44-65 4-27 (37) 15 1ard_A Yeast transcription fac 52.2 1.3 5.4E-05 23.1 -1.4 18 48-65 2-19 (29) 16 2kfq_A FP1; protein, de novo p 46.4 2.6 0.00011 21.4 -0.6 17 50-66 4-20 (32) 17 1f2i_G Fusion of N-terminal 17 46.2 3.2 0.00013 20.9 -0.2 49 17-65 12-66 (73) 18 2ept_A Zinc finger protein 32; 41.0 4.3 0.00018 20.2 -0.2 22 45-66 7-28 (41) 19 1p7a_A BF3, BKLF, kruppel-like 40.5 2.2 9.3E-05 21.8 -1.7 21 45-65 8-28 (37) 20 2eof_A Zinc finger protein 268 39.7 4.3 0.00018 20.2 -0.3 21 45-65 9-29 (44) 21 2gag_D Heterotetrameric sarcos 39.7 6.9 0.00029 19.1 0.7 18 48-65 3-24 (99) 22 2emb_A Zinc finger protein 473 39.0 5.6 0.00024 19.6 0.2 21 45-65 9-29 (44) 23 2emm_A ZFP-95, zinc finger pro 37.7 6 0.00025 19.5 0.2 22 45-66 9-30 (46) 24 2en2_A B-cell lymphoma 6 prote 37.4 4.4 0.00019 20.2 -0.6 22 45-66 8-29 (42) 25 2en8_A Zinc finger protein 224 37.1 6.1 0.00026 19.4 0.1 21 45-65 9-29 (46) 26 1pg5_B Aspartate carbamoyltran 36.8 19 0.00082 16.7 2.6 24 38-61 132-156 (168) 27 2elq_A Zinc finger protein 406 35.1 7.3 0.00031 19.0 0.2 21 45-65 6-26 (36) 28 2air_B Aspartate carbamoyltran 34.8 22 0.00091 16.4 2.6 26 36-61 122-148 (153) 29 2eos_A B-cell lymphoma 6 prote 34.7 3.1 0.00013 21.0 -1.7 21 46-66 9-29 (42) 30 2ep2_A Zinc finger protein 484 34.6 7.2 0.0003 19.0 0.2 21 45-65 9-29 (46) 31 2yso_A ZFP-95, zinc finger pro 34.4 7.6 0.00032 18.9 0.2 21 45-65 9-29 (46) 32 2ene_A Zinc finger protein 347 34.2 5.9 0.00025 19.5 -0.3 22 45-66 9-30 (46) 33 3gce_A Ferredoxin component of 33.9 20 0.00084 16.6 2.3 49 15-63 35-84 (121) 34 2ep3_A Zinc finger protein 484 33.8 7.6 0.00032 18.9 0.2 21 45-65 9-29 (46) 35 2epw_A Zinc finger protein 268 33.7 8.6 0.00036 18.6 0.4 21 45-65 9-29 (46) 36 2en1_A Zinc finger protein 224 33.7 6.1 0.00026 19.4 -0.3 21 45-65 9-29 (46) 37 2emx_A Zinc finger protein 268 33.4 8.2 0.00034 18.7 0.3 21 45-65 7-27 (44) 38 2eq0_A Zinc finger protein 347 33.0 6.7 0.00028 19.2 -0.2 21 45-65 9-29 (46) 39 2ytk_A Zinc finger protein 347 32.5 7.5 0.00031 18.9 -0.1 21 45-65 9-29 (46) 40 2ytj_A Zinc finger protein 484 32.2 8.2 0.00034 18.7 0.1 21 45-65 9-29 (46) 41 2eps_A POZ-, at HOOK-, and zin 32.0 7.5 0.00031 18.9 -0.1 21 45-65 9-29 (54) 42 3mv2_A Coatomer subunit alpha; 31.9 20 0.00086 16.5 2.1 16 46-61 285-300 (325) 43 2el6_A Zinc finger protein 268 31.6 8.7 0.00037 18.6 0.2 21 45-65 9-29 (46) 44 2yu8_A Zinc finger protein 347 31.6 9.9 0.00042 18.3 0.5 21 45-65 9-29 (46) 45 2el4_A Zinc finger protein 268 31.5 8.8 0.00037 18.5 0.2 22 45-66 9-30 (46) 46 2emh_A Zinc finger protein 484 31.5 8.5 0.00036 18.6 0.1 21 45-65 9-29 (46) 47 1zfd_A SWI5; DNA binding motif 31.4 4 0.00017 20.4 -1.6 19 47-65 2-22 (32) 48 2em3_A Zinc finger protein 28 31.4 8.6 0.00036 18.6 0.1 21 45-65 9-29 (46) 49 1x6e_A Zinc finger protein 24; 31.4 7.5 0.00032 18.9 -0.2 18 47-64 13-30 (72) 50 2ema_A Zinc finger protein 347 31.3 9.1 0.00038 18.5 0.2 21 45-65 9-29 (46) 51 2eoo_A ZFP-95, zinc finger pro 31.3 9.4 0.0004 18.4 0.3 21 45-65 9-29 (46) 52 2ytg_A ZFP-95, zinc finger pro 31.1 9.6 0.0004 18.3 0.3 21 45-65 9-29 (46) 53 2wbt_A B-129; zinc finger; 2.7 31.0 6.1 0.00026 19.4 -0.7 17 48-64 74-90 (129) 54 2be7_D Aspartate carbamoyltran 30.9 16 0.00068 17.1 1.4 26 36-61 121-147 (153) 55 2ytp_A Zinc finger protein 484 30.9 9.7 0.00041 18.3 0.3 22 45-66 9-30 (46) 56 2waq_P DNA-directed RNA polyme 30.8 14 0.0006 17.4 1.1 15 48-62 23-37 (48) 57 2epc_A Zinc finger protein 32; 30.7 8.9 0.00038 18.5 0.1 21 45-65 8-28 (42) 58 1rik_A E6APC1 peptide; E6-bind 30.6 9.5 0.0004 18.4 0.2 17 49-65 3-19 (29) 59 2emf_A Zinc finger protein 484 30.3 9.8 0.00041 18.3 0.3 21 45-65 9-29 (46) 60 2ep0_A Zinc finger protein 28 30.3 7.5 0.00032 18.9 -0.3 21 45-65 9-29 (46) 61 2emj_A Zinc finger protein 28 30.3 9.5 0.0004 18.4 0.2 21 45-65 9-29 (46) 62 2enc_A Zinc finger protein 224 30.1 9.5 0.0004 18.4 0.2 21 45-65 9-29 (46) 63 2yu5_A Zinc finger protein 473 30.1 11 0.00046 18.0 0.5 21 45-65 9-29 (44) 64 2yte_A Zinc finger protein 473 30.1 4.8 0.0002 20.0 -1.4 21 45-65 7-27 (42) 65 2kn9_A Rubredoxin; metalloprot 30.0 27 0.0011 15.9 2.5 31 43-75 22-53 (81) 66 2eml_A Zinc finger protein 28 29.8 9.4 0.0004 18.4 0.1 21 45-65 9-29 (46) 67 2en6_A Zinc finger protein 268 29.5 7.7 0.00032 18.9 -0.4 21 45-65 9-29 (46) 68 2yto_A Zinc finger protein 484 29.3 8.4 0.00035 18.7 -0.2 21 45-65 9-29 (46) 69 2elt_A Zinc finger protein 406 29.3 10 0.00042 18.2 0.2 21 45-65 6-26 (36) 70 2eoy_A Zinc finger protein 473 29.2 12 0.0005 17.8 0.5 21 45-65 9-29 (46) 71 2en3_A ZFP-95, zinc finger pro 29.1 11 0.00048 17.9 0.4 21 45-65 9-29 (46) 72 2el5_A Zinc finger protein 268 28.9 7.8 0.00033 18.8 -0.5 21 45-65 7-27 (42) 73 2j6a_A Protein TRM112; transla 28.8 20 0.00083 16.6 1.6 19 45-63 106-124 (141) 74 2emp_A Zinc finger protein 347 28.7 11 0.00045 18.1 0.2 21 45-65 9-29 (46) 75 1fqt_A Rieske-type ferredoxin 28.0 27 0.0011 15.9 2.2 46 18-63 33-78 (112) 76 1jd5_A DIAP1, apoptosis 1 inhi 27.7 30 0.0012 15.7 2.3 20 40-59 52-71 (124) 77 2yrj_A Zinc finger protein 473 27.7 12 0.0005 17.8 0.3 21 45-65 9-29 (46) 78 2ent_A Krueppel-like factor 15 27.5 9.5 0.0004 18.4 -0.2 21 45-65 9-31 (48) 79 2epv_A Zinc finger protein 268 27.2 9.3 0.00039 18.4 -0.3 21 45-65 9-29 (44) 80 2drp_A Protein (tramtrack DNA- 27.2 11 0.00046 18.1 0.0 18 47-64 39-56 (66) 81 2eme_A Zinc finger protein 473 27.1 11 0.00048 17.9 0.2 21 45-65 9-29 (46) 82 2ctu_A Zinc finger protein 483 27.1 35 0.0015 15.3 2.9 20 46-65 16-35 (73) 83 2i3h_A Baculoviral IAP repeat- 27.1 31 0.0013 15.6 2.3 20 40-59 74-93 (133) 84 2adr_A ADR1; transcription reg 27.0 11 0.00045 18.1 -0.0 20 46-65 28-47 (60) 85 1rim_A E6APC2 peptide; E6-bind 26.9 7.9 0.00033 18.8 -0.7 15 50-64 4-18 (33) 86 2ytb_A Zinc finger protein 32; 26.8 4.8 0.0002 20.0 -1.8 21 46-66 9-29 (42) 87 2em4_A Zinc finger protein 28 26.4 12 0.0005 17.8 0.1 21 45-65 9-29 (46) 88 2em8_A Zinc finger protein 224 26.2 12 0.0005 17.8 0.1 21 45-65 9-29 (46) 89 2enz_A NPKC-theta, protein kin 26.0 29 0.0012 15.7 2.0 31 28-58 3-33 (65) 90 2epu_A Zinc finger protein 32; 25.8 8 0.00034 18.8 -0.9 22 45-66 9-30 (45) 91 2yrk_A Zinc finger homeobox pr 25.7 13 0.00053 17.7 0.1 17 48-64 13-29 (55) 92 1dx8_A Rubredoxin; electron tr 25.6 30 0.0013 15.7 2.0 29 46-76 5-34 (70) 93 2emz_A ZFP-95, zinc finger pro 25.4 6.7 0.00028 19.2 -1.3 21 45-65 9-29 (46) 94 2qra_D XIAP, baculoviral IAP r 25.3 32 0.0013 15.5 2.1 20 40-59 64-83 (111) 95 2em7_A Zinc finger protein 224 24.8 14 0.00058 17.5 0.2 21 45-65 9-29 (46) 96 2eow_A Zinc finger protein 347 24.4 14 0.00061 17.4 0.3 21 45-65 9-29 (46) 97 2ely_A Zinc finger protein 224 24.0 8.6 0.00036 18.6 -1.0 22 45-66 9-30 (46) 98 2ghf_A ZHX1, zinc fingers and 24.0 15 0.00063 17.3 0.2 17 48-64 50-66 (102) 99 2eor_A Zinc finger protein 224 23.7 14 0.00059 17.4 0.1 22 45-66 9-30 (46) 100 2epx_A Zinc finger protein 28 23.7 8.1 0.00034 18.8 -1.2 21 45-65 9-29 (47) 101 2emy_A Zinc finger protein 268 23.7 15 0.00062 17.3 0.2 21 45-65 9-29 (46) 102 1njq_A Superman protein; zinc- 23.6 24 0.00099 16.2 1.2 14 47-60 5-18 (39) 103 2epr_A POZ-, at HOOK-, and zin 23.4 9.7 0.00041 18.3 -0.8 22 45-66 9-30 (48) 104 2en7_A Zinc finger protein 268 23.3 6.5 0.00027 19.3 -1.7 21 45-65 9-29 (44) 105 2em2_A Zinc finger protein 28 23.2 15 0.00063 17.3 0.2 20 46-65 10-29 (46) 106 2ytf_A Zinc finger protein 268 23.2 12 0.00052 17.8 -0.3 21 45-65 9-29 (46) 107 2ytd_A Zinc finger protein 473 23.0 15 0.00065 17.2 0.2 21 45-65 9-29 (46) 108 2kvf_A Zinc finger and BTB dom 22.9 21 0.00088 16.5 0.8 16 48-63 3-18 (28) 109 2eod_A TNF receptor-associated 22.8 33 0.0014 15.4 1.8 21 46-66 8-28 (66) 110 2poi_A Baculoviral IAP repeat- 22.8 38 0.0016 15.1 2.1 19 41-59 48-66 (94) 111 3m1d_A Baculoviral IAP repeat- 22.6 38 0.0016 15.1 2.1 20 40-59 38-57 (85) 112 1vd4_A Transcription initiatio 22.6 26 0.0011 16.0 1.3 19 46-64 37-55 (62) 113 2yts_A Zinc finger protein 484 22.5 15 0.00065 17.2 0.1 22 45-66 9-30 (46) 114 2enh_A Zinc finger protein 28 22.5 9 0.00038 18.5 -1.1 20 46-65 10-29 (46) 115 2emi_A Zinc finger protein 484 22.5 17 0.0007 17.0 0.2 21 45-65 9-29 (46) 116 2em0_A Zinc finger protein 224 22.5 7.1 0.0003 19.1 -1.6 21 45-65 9-29 (46) 117 4rxn_A Rubredoxin; electron tr 22.5 29 0.0012 15.7 1.5 24 49-74 4-28 (54) 118 2emg_A Zinc finger protein 484 22.4 8.4 0.00036 18.6 -1.3 20 46-65 10-29 (46) 119 2em9_A Zinc finger protein 224 22.3 16 0.00068 17.1 0.2 22 45-66 9-30 (46) 120 2vm5_A Baculoviral IAP repeat- 22.2 43 0.0018 14.8 2.3 20 40-59 48-67 (106) 121 2v3b_B Rubredoxin 2, rubredoxi 22.1 28 0.0012 15.8 1.4 25 48-74 3-28 (55) 122 2gqj_A Zinc finger protein KIA 22.0 9.3 0.00039 18.4 -1.1 16 43-58 19-34 (98) 123 2eoe_A Zinc finger protein 347 21.9 8.5 0.00036 18.6 -1.3 21 45-65 9-29 (46) 124 2yth_A Zinc finger protein 224 21.7 7 0.0003 19.1 -1.8 22 45-66 9-30 (46) 125 3mkr_B Coatomer subunit alpha; 21.4 30 0.0013 15.6 1.4 15 46-60 276-290 (320) 126 2eox_A Zinc finger protein 473 21.4 17 0.00071 17.0 0.1 21 45-65 9-29 (44) 127 2eq4_A Zinc finger protein 224 21.3 7.8 0.00033 18.9 -1.7 21 45-65 9-29 (46) 128 2d9k_A FLN29 gene product; zin 21.2 27 0.0011 15.9 1.1 14 47-60 42-55 (75) 129 2em5_A ZFP-95, zinc finger pro 21.1 15 0.00064 17.2 -0.2 19 47-65 11-29 (46) 130 2eoz_A Zinc finger protein 473 20.9 11 0.00048 17.9 -0.9 21 45-65 9-29 (46) 131 1yk4_A Rubredoxin, RD; electro 20.8 34 0.0014 15.4 1.5 25 49-75 3-28 (52) 132 2eop_A Zinc finger protein 268 20.8 9.7 0.00041 18.3 -1.2 21 45-65 9-29 (46) 133 1x5w_A Zinc finger protein 64, 20.6 15 0.00062 17.3 -0.3 19 46-64 35-53 (70) 134 3hl5_A Baculoviral IAP repeat- 20.4 45 0.0019 14.7 2.1 20 40-59 38-57 (95) 135 2vy4_A U11/U12 small nuclear r 20.3 37 0.0016 15.1 1.7 22 44-65 1-22 (37) 136 2d9h_A Zinc finger protein 692 20.2 15 0.00064 17.2 -0.3 17 48-64 38-54 (78) 137 2em6_A Zinc finger protein 224 20.1 11 0.00044 18.1 -1.2 20 46-65 10-29 (46) 138 2ep1_A Zinc finger protein 484 20.1 8.6 0.00036 18.6 -1.6 20 46-65 10-29 (46) No 1 >2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str} Probab=100.00 E-value=2.6e-35 Score=212.69 Aligned_cols=77 Identities=60% Similarity=1.158 Sum_probs=76.1 Q ss_pred CCCCCCCCEECCCCCCEEEECCEEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCEEEECCCCCCCCCCCCCCEEE Q ss_conf 97557864112479851994654999937899889867999959998899888882136546768444688002461 Q gi|254780167|r 1 MVDHPIPHFQNDRGHSRIKIGVKKFMCAGTSPPLDHPHVFINMGEENEKHCPYCSTLYHFDSSLDSKETLPVGCLLS 77 (78) Q Consensus 1 Ma~~~~P~f~nd~g~~~I~v~~~~v~CdGg~g~lgHP~V~l~l~~~~~v~C~YC~~~fv~~~~l~~~es~P~~c~~~ 77 (78) ||++.+|||+||.|+++|+|++++|+||||++|||||+|||+|+++++++|||||++|+|+++++++||+|++|+|. T Consensus 1 ma~~~~P~f~nd~gv~~I~V~~~~v~CdGg~~~lgHP~Vyl~~~~~~~v~CpYC~~~fv~~~~l~~~ea~P~~c~~~ 77 (87) T 2jz8_A 1 MADYNIPHFQNDLGYKIIEIGVKEFMCVGATQPFDHPHIFIDMGSTDEKICPYCSTLYRYDPSLSYNQTNPTGCLYN 77 (87) T ss_dssp CCSSCCCCBCCSSCCSEEECSCSEEECCCSSCSSSSSSCEEECTTCCEECCTTTCCEEECCTTSCTTCCCSSCCBCC T ss_pred CCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCEEEECCCCCCCCCCCCCCEEC T ss_conf 98766864116689873897984999749999999998978869999798889998888377777676489765722 No 2 >2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2} Probab=99.80 E-value=2.6e-20 Score=130.72 Aligned_cols=55 Identities=25% Similarity=0.523 Sum_probs=48.8 Q ss_pred CCCCEEEECCEEEEEECCCCCCCCCEEEEECCCC-CEEECCCCCCEEEECCCCCCC Q ss_conf 7985199465499993789988986799995999-889988888213654676844 Q gi|254780167|r 13 RGHSRIKIGVKKFMCAGTSPPLDHPHVFINMGEE-NEKHCPYCSTLYHFDSSLDSK 67 (78) Q Consensus 13 ~g~~~I~v~~~~v~CdGg~g~lgHP~V~l~l~~~-~~v~C~YC~~~fv~~~~l~~~ 67 (78) ...|+|.|++++|+||||+++||||+|||+|+++ ++++|+|||++|+++..+++. T Consensus 17 ~~peii~V~~~~VaCdGg~g~lGHP~Vyl~l~~~~~~v~C~YC~~~fv~k~~a~~~ 72 (80) T 2jvm_A 17 EAPETVVVSTWKVACDGGEGALGHPRVWLSIPHETGFVECGYCDRRYIHESFAAAK 72 (80) T ss_dssp SCCSEEEESCSEEEECCCSTTCCCCCEEEECCTTTCEEECSSSSCEEEEHHHHSCC T ss_pred CCCCEEEECCCEEEEECCCCCCCCCEEEEECCCCCCEEECCCCCCEEECHHHHHHH T ss_conf 89982897588999739899899988938757999869888998866704456555 No 3 >2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi} Probab=99.79 E-value=6.3e-20 Score=128.64 Aligned_cols=55 Identities=24% Similarity=0.556 Sum_probs=48.7 Q ss_pred CCCCEEEECCEEEEEECCCCCCCCCEEEEECCCC-CEEECCCCCCEEEECCCCCCC Q ss_conf 7985199465499993789988986799995999-889988888213654676844 Q gi|254780167|r 13 RGHSRIKIGVKKFMCAGTSPPLDHPHVFINMGEE-NEKHCPYCSTLYHFDSSLDSK 67 (78) Q Consensus 13 ~g~~~I~v~~~~v~CdGg~g~lgHP~V~l~l~~~-~~v~C~YC~~~fv~~~~l~~~ 67 (78) ...|+|.|++++|+||||+++||||+|||+|+++ ++++|||||++|+++++.+.+ T Consensus 4 ~a~Eii~v~~~~V~CdGg~g~lgHP~Vyl~l~~~~~~v~CpYC~~~fv~k~~~~d~ 59 (67) T 2jrr_A 4 QAPETKIVDKSRVACDGGEGALGHPRVWLQIPEDTGWVECPYCDCKYVLKGSKADA 59 (67) T ss_dssp CCCEEEEESSSEEEEEESSTTSEEEEEEEECCTTTSEEEETTTTEEEEETTSGGGC T ss_pred CCCCEEEECCCEEEECCCCCCCCCCEEEEECCCCCCEEECCCCCCEEEECCCCCCC T ss_conf 89857999072999689999899998989856999869898898798987886676 No 4 >1v54_F VI, cytochrome C oxidase polypeptide VB; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: g.41.5.3 PDB: 1oco_F* 1occ_F* 1ocz_F* 1ocr_F* 1v55_F* 2dyr_F* 2dys_F* 2eij_F* 2eik_F* 2eil_F* 2eim_F* 2ein_F* 2occ_F* 2zxw_F* 3abk_F* 3abl_F* 3abm_F* 3ag1_F* 3ag2_F* 3ag3_F* ... Probab=95.84 E-value=0.0091 Score=34.86 Aligned_cols=45 Identities=13% Similarity=0.327 Sum_probs=36.9 Q ss_pred CEEEE----CCEEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCEEEECC Q ss_conf 51994----654999937899889867999959998899888882136546 Q gi|254780167|r 16 SRIKI----GVKKFMCAGTSPPLDHPHVFINMGEENEKHCPYCSTLYHFDS 62 (78) Q Consensus 16 ~~I~v----~~~~v~CdGg~g~lgHP~V~l~l~~~~~v~C~YC~~~fv~~~ 62 (78) .+|.| +.|.|-|.| ++-.|..+|+.+.++....|+.||.-|++.. T Consensus 45 ~P~lVpS~~d~RiVGC~~--~~D~h~v~W~~l~~g~p~RC~eCG~~fkL~~ 93 (98) T 1v54_F 45 DPNLVPSITNKRIVGCIC--EEDNSTVIWFWLHKGEAQRCPSCGTHYKLVP 93 (98) T ss_dssp SCEEEECSSSEEEEEECC--STTCSCCEEEEEESSSCEECTTTCCEEEEEC T ss_pred CCCEECCCCCCEEEEECC--CCCCCEEEEEEEECCCCCCCCCCCCEEEEEE T ss_conf 985804779863886516--8877534889986799634587785899865 No 5 >2odx_A Cytochrome C oxidase polypeptide IV; all beta-protein, metallo-protein, oxidoreductase; NMR {Saccharomyces cerevisiae} Probab=95.47 E-value=0.016 Score=33.60 Aligned_cols=42 Identities=17% Similarity=0.468 Sum_probs=36.2 Q ss_pred CCEEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCEEEECCC Q ss_conf 6549999378998898679999599988998888821365467 Q gi|254780167|r 21 GVKKFMCAGTSPPLDHPHVFINMGEENEKHCPYCSTLYHFDSS 63 (78) Q Consensus 21 ~~~~v~CdGg~g~lgHP~V~l~l~~~~~v~C~YC~~~fv~~~~ 63 (78) +.|.|-|.|. ++-.|-.+|+.|.++....|+=||.-|+++-- T Consensus 30 ~~RiVGC~g~-~~dsh~v~W~~l~~g~~~RC~eCG~~fkL~~v 71 (80) T 2odx_A 30 DYRYVGCTGS-PAGSHTIMWLKPTVNEVARCWECGSVYKLNPV 71 (80) T ss_dssp SSCCEEESSS-TTCCSCCEEECCCTTCEEECSSSCCEEEECCC T ss_pred CCEEEEEECC-CCCCCEEEEEEECCCCCCCCCCCCCEEEEEEE T ss_conf 9779877578-88874668999607984235668869999880 No 6 >3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori} Probab=77.56 E-value=0.94 Score=23.86 Aligned_cols=55 Identities=20% Similarity=0.468 Sum_probs=32.7 Q ss_pred CCCEEEECCEEEEEECCCCCCCCCEEEEECC-CCCEEECCCCCCEEEECCCCCCCCCCC Q ss_conf 9851994654999937899889867999959-998899888882136546768444688 Q gi|254780167|r 14 GHSRIKIGVKKFMCAGTSPPLDHPHVFINMG-EENEKHCPYCSTLYHFDSSLDSKETLP 71 (78) Q Consensus 14 g~~~I~v~~~~v~CdGg~g~lgHP~V~l~l~-~~~~v~C~YC~~~fv~~~~l~~~es~P 71 (78) |..++.|... .|-|=+-.+ -|.+|..+- .++.+.||+|||.-++..........| T Consensus 190 ~~av~~v~~~--~C~gC~~~l-~~~~~~~~~~~~~i~~C~~CgRiL~~~~~~~~~~~~~ 245 (256) T 3na7_A 190 NTSIVTIKKQ--ACGGCFIRL-NDKIYTEVLTSGDMITCPYCGRILYAEGAYESNAQPP 245 (256) T ss_dssp GGSEEECBTT--BCTTTCCBC-CHHHHHHHHHSSSCEECTTTCCEEECSCC-------- T ss_pred CCEEEEEECC--CCCCCCCCC-CHHHHHHHHCCCCEEECCCCCCEEEECCCCCCCCCCC T ss_conf 9748973599--168878243-8999999885999048989997785066343345993 No 7 >3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, apoptosis, cytoplasm, metal-binding, nucleus, phosphoprotein, transcription; 1.80A {Homo sapiens} Probab=75.08 E-value=0.47 Score=25.49 Aligned_cols=23 Identities=17% Similarity=0.419 Sum_probs=18.8 Q ss_pred CCCCCEEECCCCCCEEEECCCCC Q ss_conf 59998899888882136546768 Q gi|254780167|r 43 MGEENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 43 l~~~~~v~C~YC~~~fv~~~~l~ 65 (78) ++++++-.|+.|++||+-...|+ T Consensus 2 ~~~~Kp~~C~vC~krYKn~nGL~ 24 (48) T 3iuf_A 2 EDRDKPYACDICGKRYKNRPGLS 24 (48) T ss_dssp CTTTSCEECTTTCCEESSHHHHH T ss_pred CCCCCCCCCCHHHHHHCCCCCCH T ss_conf 86677610612435542787620 No 8 >2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=68.65 E-value=1.1 Score=23.42 Aligned_cols=16 Identities=25% Similarity=0.818 Sum_probs=12.4 Q ss_pred CEEECCCCCCEEEECC Q ss_conf 8899888882136546 Q gi|254780167|r 47 NEKHCPYCSTLYHFDS 62 (78) Q Consensus 47 ~~v~C~YC~~~fv~~~ 62 (78) .-.-||||+..|.-+. T Consensus 8 RA~KCPyCd~~F~kng 23 (37) T 2elp_A 8 RAMKCPYCDFYFMKNG 23 (37) T ss_dssp CCEECSSSSCEECSSC T ss_pred CCCCCCCHHHHHHHCC T ss_conf 6314870168885056 No 9 >2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=65.81 E-value=1.1 Score=23.41 Aligned_cols=21 Identities=29% Similarity=0.762 Sum_probs=16.8 Q ss_pred CCEEECCCCCCEEEECCCCCC Q ss_conf 988998888821365467684 Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLDS 66 (78) Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~~ 66 (78) .+.-.|-||+++|+++.+|.+ T Consensus 7 ~k~FsCe~C~k~FKfkhsL~~ 27 (36) T 2els_A 7 GKIFTCEYCNKVFKFKHSLQA 27 (36) T ss_dssp CCCEECTTTCCEESSHHHHHH T ss_pred CCEEEHHHHHHHHHHHHHHHH T ss_conf 754645887789989899999 No 10 >1vzy_A 33 kDa chaperonin; chaperone, heat shock protein, crystal engineering, molecular chaperone, redox-active center, PSI; 1.97A {Bacillus subtilis} SCOP: d.193.1.1 g.81.1.1 Probab=61.16 E-value=3.1 Score=21.03 Aligned_cols=15 Identities=33% Similarity=0.886 Sum_probs=12.0 Q ss_pred EEECCCCCCEEEECC Q ss_conf 899888882136546 Q gi|254780167|r 48 EKHCPYCSTLYHFDS 62 (78) Q Consensus 48 ~v~C~YC~~~fv~~~ 62 (78) ++.|.||++.|.++. T Consensus 265 ev~CeFC~~~Y~f~~ 279 (291) T 1vzy_A 265 EAVCHFCNEKYLFTK 279 (291) T ss_dssp EEECTTTCCEEEEEH T ss_pred EEEEECCCCEEEECH T ss_conf 999768799898899 No 11 >1vq0_A 33 kDa chaperonin; TM1394, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: UNL; 2.20A {Thermotoga maritima} SCOP: d.193.1.1 g.81.1.1 Probab=61.02 E-value=3.3 Score=20.86 Aligned_cols=16 Identities=38% Similarity=0.864 Sum_probs=13.1 Q ss_pred CEEECCCCCCEEEECC Q ss_conf 8899888882136546 Q gi|254780167|r 47 NEKHCPYCSTLYHFDS 62 (78) Q Consensus 47 ~~v~C~YC~~~fv~~~ 62 (78) -.+.|.||+++|.++. T Consensus 271 iev~CeFC~~~Y~f~~ 286 (302) T 1vq0_A 271 GEVVCKWCNTRYVFSE 286 (302) T ss_dssp EEEECTTTCCEEEECH T ss_pred EEEEEECCCCEEEECH T ss_conf 4999989899798699 No 12 >1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Probab=58.72 E-value=1.5 Score=22.74 Aligned_cols=24 Identities=13% Similarity=0.369 Sum_probs=19.2 Q ss_pred CCCCCEEECCC--CCCEEEECCCCCC Q ss_conf 59998899888--8821365467684 Q gi|254780167|r 43 MGEENEKHCPY--CSTLYHFDSSLDS 66 (78) Q Consensus 43 l~~~~~v~C~Y--C~~~fv~~~~l~~ 66 (78) -..+++-.|+| |++.|...+.|+. T Consensus 13 h~~ekp~~C~~~~C~K~F~r~~~L~~ 38 (47) T 1ncs_A 13 EMPDKTFECLFPGCTKTFKRRYNIRS 38 (47) T ss_dssp EETTTEEECCCTTCCCEECSSSSHHH T ss_pred CCCCCCEECCCCCCCCCCCCHHHHHH T ss_conf 47897958888899998575356664 No 13 >1i7f_A Heat shock protein 33; HSP33, redox sensitive molecular chaperone; 2.70A {Escherichia coli} SCOP: d.193.1.1 PDB: 1xjh_A Probab=55.85 E-value=2 Score=22.11 Aligned_cols=17 Identities=35% Similarity=0.948 Sum_probs=14.3 Q ss_pred CEEECCCCCCEEEECCC Q ss_conf 88998888821365467 Q gi|254780167|r 47 NEKHCPYCSTLYHFDSS 63 (78) Q Consensus 47 ~~v~C~YC~~~fv~~~~ 63 (78) -++.|.||+++|.++.. T Consensus 259 iev~C~FC~~~Y~f~~~ 275 (292) T 1i7f_A 259 IDMHCDYCGNHYLFNAM 275 (292) T ss_dssp ----------------- T ss_pred EEEEEECCCCEEEECHH T ss_conf 89995687998988999 No 14 >1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Probab=55.57 E-value=1.5 Score=22.80 Aligned_cols=22 Identities=27% Similarity=0.640 Sum_probs=17.5 Q ss_pred CCCCEEECCC--CCCEEEECCCCC Q ss_conf 9998899888--882136546768 Q gi|254780167|r 44 GEENEKHCPY--CSTLYHFDSSLD 65 (78) Q Consensus 44 ~~~~~v~C~Y--C~~~fv~~~~l~ 65 (78) +++.+-.|+| |++.|...+.|+ T Consensus 4 ~~~k~y~C~~~~C~k~F~~~~~L~ 27 (37) T 1va1_A 4 GKKKQHICHIQGCGKVYGKTSHLR 27 (37) T ss_dssp SSCCCEECCSTTCCCEESCHHHHH T ss_pred CCCCCCCCCCCCCCCEECCHHHHH T ss_conf 898887991989899759657867 No 15 >1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Probab=52.18 E-value=1.3 Score=23.11 Aligned_cols=18 Identities=17% Similarity=0.425 Sum_probs=14.3 Q ss_pred EEECCCCCCEEEECCCCC Q ss_conf 899888882136546768 Q gi|254780167|r 48 EKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 48 ~v~C~YC~~~fv~~~~l~ 65 (78) +-.|++|++.|...+.|+ T Consensus 2 p~~C~~C~k~F~~~~~L~ 19 (29) T 1ard_A 2 SFVCEVCTRAFARQEHLK 19 (29) T ss_dssp CCBCTTTCCBCSSHHHHH T ss_pred CCCCCCCCCCCCCHHHHC T ss_conf 836889879987705822 No 16 >2kfq_A FP1; protein, de novo protein; NMR {Synthetic} Probab=46.38 E-value=2.6 Score=21.44 Aligned_cols=17 Identities=24% Similarity=0.651 Sum_probs=13.9 Q ss_pred ECCCCCCEEEECCCCCC Q ss_conf 98888821365467684 Q gi|254780167|r 50 HCPYCSTLYHFDSSLDS 66 (78) Q Consensus 50 ~C~YC~~~fv~~~~l~~ 66 (78) .|+.|+++|-....|.- T Consensus 4 ~C~~C~KrFsRSDhLsk 20 (32) T 2kfq_A 4 ACPACPKRFMRSDALSK 20 (32) T ss_dssp SSSSSCTTHHHHHTTSS T ss_pred CCCCCCCCCCCHHHHHH T ss_conf 67755553250277888 No 17 >1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Probab=46.17 E-value=3.2 Score=20.95 Aligned_cols=49 Identities=8% Similarity=0.287 Sum_probs=26.1 Q ss_pred EEEECCEEEEEE--CCCCCCCCCEEEE---EC-CCCCEEECCCCCCEEEECCCCC Q ss_conf 199465499993--7899889867999---95-9998899888882136546768 Q gi|254780167|r 17 RIKIGVKKFMCA--GTSPPLDHPHVFI---NM-GEENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 17 ~I~v~~~~v~Cd--Gg~g~lgHP~V~l---~l-~~~~~v~C~YC~~~fv~~~~l~ 65 (78) .|....|.+.|+ +=+-.+....-+. .+ -.+..-.|++|++.|...+.|+ T Consensus 12 ~~~~~~kpy~C~~~~C~k~F~~~~~l~~H~~~H~~~k~~~C~~C~k~F~~~~~L~ 66 (73) T 1f2i_G 12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLT 66 (73) T ss_dssp CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHH T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHH T ss_conf 7898996953998878893297899999998608983827998988739889997 No 18 >2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=40.97 E-value=4.3 Score=20.25 Aligned_cols=22 Identities=18% Similarity=0.368 Sum_probs=17.8 Q ss_pred CCCEEECCCCCCEEEECCCCCC Q ss_conf 9988998888821365467684 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78) .+.+-.|..|++.|...+.|+. T Consensus 7 gekpy~C~~Cgk~F~~~~~L~~ 28 (41) T 2ept_A 7 GQRVYECQECGKSFRQKGSLTL 28 (41) T ss_dssp CCCCEECSSSCCEESSHHHHHH T ss_pred CCCCEECCCCCCEECCHHHHHH T ss_conf 9979868986986486789999 No 19 >1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Probab=40.47 E-value=2.2 Score=21.84 Aligned_cols=21 Identities=19% Similarity=0.428 Sum_probs=16.8 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|++|++.|...+.|+ T Consensus 8 gekPy~C~~Cgk~F~~~~~L~ 28 (37) T 1p7a_A 8 GIKPFQCPDCDRSFSRSDHLA 28 (37) T ss_dssp CSSSBCCTTTCCCBSSHHHHH T ss_pred CCCCEECCCCCCEECCHHHHH T ss_conf 888947899999917788889 No 20 >2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=39.70 E-value=4.3 Score=20.22 Aligned_cols=21 Identities=24% Similarity=0.455 Sum_probs=17.4 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|.+|++.|.....|+ T Consensus 9 GeKpy~C~~Cgk~F~~~~~L~ 29 (44) T 2eof_A 9 GEKPYECNECQKAFNTKSNLM 29 (44) T ss_dssp CCCSEECTTTCCEESCHHHHH T ss_pred CCCCEECCCCCCEECCHHHHH T ss_conf 997947898699828778878 No 21 >2gag_D Heterotetrameric sarcosine oxidase delta-subunit; flavoenzyme, electron transfer, folate- methylating enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_D* 1x31_D* 1vrq_D* 3ad7_D* 3ad8_D* 3ad9_D* 3ada_D* Probab=39.68 E-value=6.9 Score=19.13 Aligned_cols=18 Identities=17% Similarity=0.624 Sum_probs=12.9 Q ss_pred EEECCCCCCE----EEECCCCC Q ss_conf 8998888821----36546768 Q gi|254780167|r 48 EKHCPYCSTL----YHFDSSLD 65 (78) Q Consensus 48 ~v~C~YC~~~----fv~~~~l~ 65 (78) .+.|||||.| |.|.+..+ T Consensus 3 ~I~CP~CG~Rd~~EF~y~Gea~ 24 (99) T 2gag_D 3 LIDCPNCGPRNENEFKYGGEAH 24 (99) T ss_dssp EEEETTTEEEEGGGSEEEEESS T ss_pred EECCCCCCCCCHHHCCCCCCCC T ss_conf 7649998971176535777444 No 22 >2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=39.02 E-value=5.6 Score=19.61 Aligned_cols=21 Identities=14% Similarity=0.456 Sum_probs=17.4 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|.....|. T Consensus 9 ~Ekpy~C~~Cgk~F~~~~~L~ 29 (44) T 2emb_A 9 TRKRYECSKCQATFNLRKHLI 29 (44) T ss_dssp CCSSEECTTTCCEESCHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 986967899989558779999 No 23 >2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=37.69 E-value=6 Score=19.46 Aligned_cols=22 Identities=18% Similarity=0.360 Sum_probs=17.8 Q ss_pred CCCEEECCCCCCEEEECCCCCC Q ss_conf 9988998888821365467684 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78) .+.+-.|.+|++.|...+.|.. T Consensus 9 geKpy~C~~Cgk~F~~~s~L~~ 30 (46) T 2emm_A 9 GERPHKCNECGKSFIQSAHLIQ 30 (46) T ss_dssp CCCSEECSSSCCEESSHHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHHH T ss_conf 9989389999997487899999 No 24 >2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=37.37 E-value=4.4 Score=20.19 Aligned_cols=22 Identities=18% Similarity=0.369 Sum_probs=17.6 Q ss_pred CCCEEECCCCCCEEEECCCCCC Q ss_conf 9988998888821365467684 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78) .+.+-.|..|++.|...+.|+. T Consensus 8 GeKPy~C~~Cgk~F~~~~~L~~ 29 (42) T 2en2_A 8 GEKPYKCETCGARFVQVAHLRA 29 (42) T ss_dssp SSCSEECTTTCCEESSHHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHHH T ss_conf 9789788986998388889999 No 25 >2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=37.13 E-value=6.1 Score=19.42 Aligned_cols=21 Identities=24% Similarity=0.529 Sum_probs=17.5 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .++.-.|.+|++.|.+..+|. T Consensus 9 gekpy~C~~Cgk~F~~~~~L~ 29 (46) T 2en8_A 9 GEKSHTCDECGKNFCYISALR 29 (46) T ss_dssp CCSSEECTTTCCEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 998928998897878789999 No 26 >1pg5_B Aspartate carbamoyltransferase regulatory chain; 2.60A {Sulfolobus acidocaldarius} SCOP: d.58.2.1 g.41.7.1 PDB: 2be9_B* Probab=36.80 E-value=19 Score=16.67 Aligned_cols=24 Identities=25% Similarity=0.560 Sum_probs=17.1 Q ss_pred EEEEECCC-CCEEECCCCCCEEEEC Q ss_conf 79999599-9889988888213654 Q gi|254780167|r 38 HVFINMGE-ENEKHCPYCSTLYHFD 61 (78) Q Consensus 38 ~V~l~l~~-~~~v~C~YC~~~fv~~ 61 (78) ..|.-+++ +....|-||++.|..+ T Consensus 132 ~~f~~~~~~~~~lrC~YCe~~~~~~ 156 (168) T 1pg5_B 132 PTFKTLTEKPLKMRCEYCETIIDEN 156 (168) T ss_dssp CEEEEEETTTTEEEETTTCCEEEHH T ss_pred CEEEEEECCCCEEEEECCCCEECHH T ss_conf 6799983899789806799792699 No 27 >2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=35.10 E-value=7.3 Score=19.00 Aligned_cols=21 Identities=19% Similarity=0.343 Sum_probs=17.2 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|.+|++.|.....|. T Consensus 6 ~eKPykC~~C~k~F~~~~~L~ 26 (36) T 2elq_A 6 SGKPFKCSLCEYATRSKSNLK 26 (36) T ss_dssp CCCSEECSSSSCEESCHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 998986899876048879999 No 28 >2air_B Aspartate carbamoyltransferase regulatory chain; aspartate transcarbamylase, alanosine, carbamyl phosphate, T-state; HET: AL0; 2.00A {Escherichia coli} SCOP: d.58.2.1 g.41.7.1 PDB: 1ezz_B 1f1b_B* 1i5o_B* 1q95_G* 1r0b_G* 1r0c_B* 1raa_B* 1rab_B* 1rac_B* 1rad_B* 1rae_B* 1raf_B* 1rag_B* 1rah_B* 1rai_B* 1sku_B 1tth_B* 1tu0_B 1tug_B* 1xjw_B* ... Probab=34.82 E-value=22 Score=16.42 Aligned_cols=26 Identities=12% Similarity=0.387 Sum_probs=17.2 Q ss_pred CCEEEEECCCC-CEEECCCCCCEEEEC Q ss_conf 86799995999-889988888213654 Q gi|254780167|r 36 HPHVFINMGEE-NEKHCPYCSTLYHFD 61 (78) Q Consensus 36 HP~V~l~l~~~-~~v~C~YC~~~fv~~ 61 (78) -++.|+..+.+ ....|-||++.|..+ T Consensus 122 ~~~f~~~~~~~~~~~rC~YCe~~~~~~ 148 (153) T 2air_B 122 SSSFAVRKRANDIALKCKYCEKEFSHN 148 (153) T ss_dssp CCEEEEEECSSCEEEEETTTCCEEEHH T ss_pred CCEEEEEECCCCCEEEEECCCCCCCCC T ss_conf 855899973898189957899793527 No 29 >2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=34.66 E-value=3.1 Score=20.99 Aligned_cols=21 Identities=29% Similarity=0.528 Sum_probs=17.0 Q ss_pred CCEEECCCCCCEEEECCCCCC Q ss_conf 988998888821365467684 Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLDS 66 (78) Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~~ 66 (78) +.+-.|.+|++.|...+.|+. T Consensus 9 ekpy~C~~Cgk~F~~~~~L~~ 29 (42) T 2eos_A 9 EKPYPCEICGTRFRHLQTLKS 29 (42) T ss_dssp SCCBCCSSSCCCBSSHHHHHH T ss_pred CCCEECCCCCCEECCHHHHHH T ss_conf 889758988984078899999 No 30 >2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=34.63 E-value=7.2 Score=19.03 Aligned_cols=21 Identities=24% Similarity=0.498 Sum_probs=17.1 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|.+|++.|...+.|. T Consensus 9 GeKpy~C~~Cgk~F~~~~~L~ 29 (46) T 2ep2_A 9 GEKPYECSICGKSFTKKSQLH 29 (46) T ss_dssp CCCSEECSSSCCEESSHHHHH T ss_pred CCCCEECCCCCCEECCHHHHH T ss_conf 996967898799708778999 No 31 >2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=34.39 E-value=7.6 Score=18.91 Aligned_cols=21 Identities=24% Similarity=0.482 Sum_probs=17.5 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|.....|. T Consensus 9 gEkpy~C~~CgK~F~~~s~L~ 29 (46) T 2yso_A 9 REKSHQCRECGEIFFQYVSLI 29 (46) T ss_dssp CCCCEECTTTCCEESSHHHHH T ss_pred CCCCCCCCCCCCCCCCHHHHH T ss_conf 998828899989777458789 No 32 >2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=34.19 E-value=5.9 Score=19.49 Aligned_cols=22 Identities=23% Similarity=0.542 Sum_probs=17.9 Q ss_pred CCCEEECCCCCCEEEECCCCCC Q ss_conf 9988998888821365467684 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78) .+++-.|..|++.|.+...|+. T Consensus 9 gEKpy~C~~Cgk~F~~~~~L~~ 30 (46) T 2ene_A 9 GEKPYKCNECGKVFRHNSYLSR 30 (46) T ss_dssp CSSSEECSSSCCEESSHHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHHH T ss_conf 9969489999997588899999 No 33 >3gce_A Ferredoxin component of carbazole 1,9A- dioxygenase; rieske ferredoxin, 2Fe-2S, electron transfer, oxidoreductase; 2.00A {Nocardioides aromaticivorans} Probab=33.89 E-value=20 Score=16.60 Aligned_cols=49 Identities=10% Similarity=0.103 Sum_probs=30.8 Q ss_pred CCEEEECCEEEEEECCCCCCCCCEEEEEC-CCCCEEECCCCCCEEEECCC Q ss_conf 85199465499993789988986799995-99988998888821365467 Q gi|254780167|r 15 HSRIKIGVKKFMCAGTSPPLDHPHVFINM-GEENEKHCPYCSTLYHFDSS 63 (78) Q Consensus 15 ~~~I~v~~~~v~CdGg~g~lgHP~V~l~l-~~~~~v~C~YC~~~fv~~~~ 63 (78) +-++..+.+.++.+.--+-.|=|..+-.+ .+++.+.||+.+-+|-++.. T Consensus 35 i~l~r~~g~~~A~~~~CpH~g~~L~~g~~~~~~~~i~CP~H~~~Fdl~tG 84 (121) T 3gce_A 35 VMVVRDGDSVYAISNLCSHAEAYLDMGVFHAESLEIECPLHVGRFDVRTG 84 (121) T ss_dssp EEEEEETTEEEEEESBCSSSSCBGGGSEEETTTTEEECTTTCCEEETTTC T ss_pred EEEEEECCEEEEEECCCCCCCCCCCCCCEECCCCEEEECCCCCEEECCCC T ss_conf 99999899999997739989978415748648999996899989999996 No 34 >2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=33.76 E-value=7.6 Score=18.90 Aligned_cols=21 Identities=24% Similarity=0.384 Sum_probs=17.2 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|.+|++.|.....|. T Consensus 9 GeKpy~C~~Cgk~F~~~s~L~ 29 (46) T 2ep3_A 9 GEKPYRCAECGKAFTDRSNLF 29 (46) T ss_dssp CCCSEECSSSCCEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 997948999899628778999 No 35 >2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=33.67 E-value=8.6 Score=18.59 Aligned_cols=21 Identities=24% Similarity=0.495 Sum_probs=17.5 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|.....|. T Consensus 9 geKpy~C~~Cgk~F~~~s~L~ 29 (46) T 2epw_A 9 GEKPCKCTECGKAFCWKSQLI 29 (46) T ss_dssp CCCSEECSSSCCEESSSHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 996948999996838769999 No 36 >2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=33.67 E-value=6.1 Score=19.41 Aligned_cols=21 Identities=24% Similarity=0.472 Sum_probs=17.3 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|.+|++.|...+.|. T Consensus 9 GEkpy~C~~C~k~F~~~~~L~ 29 (46) T 2en1_A 9 GEKPFKCEECGKRFTQNSQLH 29 (46) T ss_dssp CCCSEEETTTTEEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 978978999899567789999 No 37 >2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=33.36 E-value=8.2 Score=18.72 Aligned_cols=21 Identities=24% Similarity=0.371 Sum_probs=17.3 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|.....|. T Consensus 7 geKpy~C~~Cgk~F~~~~~L~ 27 (44) T 2emx_A 7 GEKPFGCSCCEKAFSSKSYLL 27 (44) T ss_dssp SCCCEECSSSSCEESSHHHHH T ss_pred CCCCEECCCCCCEECCHHHHH T ss_conf 998978999898738778999 No 38 >2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=33.04 E-value=6.7 Score=19.21 Aligned_cols=21 Identities=24% Similarity=0.532 Sum_probs=17.4 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|.....|+ T Consensus 9 GeKpy~C~~CgK~F~~~~~L~ 29 (46) T 2eq0_A 9 GEKPYKCHECGKVFRRNSHLA 29 (46) T ss_dssp CCCCEECTTTCCEESSHHHHH T ss_pred CCCCEECCCCCCEECCHHHHH T ss_conf 996968999998718789999 No 39 >2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=32.48 E-value=7.5 Score=18.94 Aligned_cols=21 Identities=24% Similarity=0.536 Sum_probs=17.0 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|.+|++.|.....|. T Consensus 9 GEKpy~C~~Cgk~F~~~~~L~ 29 (46) T 2ytk_A 9 GEKPYKCNECGKVFTQNSHLT 29 (46) T ss_dssp SSCSEECSSSCCEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 998979999999758889999 No 40 >2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=32.17 E-value=8.2 Score=18.73 Aligned_cols=21 Identities=24% Similarity=0.438 Sum_probs=17.3 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|..|++.|...+.|. T Consensus 9 GEkpy~C~~Cgk~F~~~s~L~ 29 (46) T 2ytj_A 9 GEKPYICAECGKAFTIRSNLI 29 (46) T ss_dssp SCCSEECSSSCCEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 997978998799628689999 No 41 >2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Probab=31.96 E-value=7.5 Score=18.94 Aligned_cols=21 Identities=14% Similarity=0.284 Sum_probs=16.5 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|..|++.|.....|+ T Consensus 9 ~ekpy~C~~Cgk~F~~~~~L~ 29 (54) T 2eps_A 9 VGKPYICQSCGKGFSRPDHLN 29 (54) T ss_dssp SSCCEECSSSCCEESSHHHHH T ss_pred CCCCCCCCCCCCCCCCHHHCC T ss_conf 987866889899868744625 No 42 >3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A Probab=31.89 E-value=20 Score=16.55 Aligned_cols=16 Identities=13% Similarity=0.164 Sum_probs=12.2 Q ss_pred CCEEECCCCCCEEEEC Q ss_conf 9889988888213654 Q gi|254780167|r 46 ENEKHCPYCSTLYHFD 61 (78) Q Consensus 46 ~~~v~C~YC~~~fv~~ 61 (78) ...+.|||||-.|.-+ T Consensus 285 ~~~v~Cp~CgA~y~~~ 300 (325) T 3mv2_A 285 TPSVSDPLTGSKYVIT 300 (325) T ss_dssp SCEEECTTTCCEEEGG T ss_pred CCCCCCCCCCCEECHH T ss_conf 9971417978862563 No 43 >2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Probab=31.63 E-value=8.7 Score=18.57 Aligned_cols=21 Identities=19% Similarity=0.270 Sum_probs=17.0 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|..|++.|.....|. T Consensus 9 geKpy~C~~Cgk~F~~~s~L~ 29 (46) T 2el6_A 9 GVNPYKCSQCEKSFSGKLRLL 29 (46) T ss_dssp CCCSEECSSSSCEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 997978999899858888999 No 44 >2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=31.57 E-value=9.9 Score=18.26 Aligned_cols=21 Identities=24% Similarity=0.531 Sum_probs=17.5 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|.+.+.|. T Consensus 9 GEKpy~C~~Cgk~F~~~s~L~ 29 (46) T 2yu8_A 9 GEKPYKCNECGKVFTQNSHLA 29 (46) T ss_dssp CCSSEECSSSCCEESSSHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 997918999999958889999 No 45 >2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Probab=31.48 E-value=8.8 Score=18.55 Aligned_cols=22 Identities=18% Similarity=0.375 Sum_probs=17.7 Q ss_pred CCCEEECCCCCCEEEECCCCCC Q ss_conf 9988998888821365467684 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78) .+++-.|..|++.|...+.|.. T Consensus 9 GeKpy~C~~CgK~F~~~s~L~~ 30 (46) T 2el4_A 9 GVKPYGCSQCAKTFSLKSQLIV 30 (46) T ss_dssp CCCSEECSSSSCEESSHHHHHH T ss_pred CCCCEECCCCCCEECCHHHHHH T ss_conf 9889789982998086467667 No 46 >2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=31.48 E-value=8.5 Score=18.64 Aligned_cols=21 Identities=24% Similarity=0.365 Sum_probs=17.5 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|...+.|. T Consensus 9 GEkpy~C~~Cgk~F~~~s~L~ 29 (46) T 2emh_A 9 GERPYICTVCGKAFTDRSNLI 29 (46) T ss_dssp CCCSEECTTTCCEESSHHHHH T ss_pred CCCCEECCCCCCEECCHHHHH T ss_conf 997968999999508789999 No 47 >1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Probab=31.39 E-value=4 Score=20.40 Aligned_cols=19 Identities=16% Similarity=0.345 Sum_probs=14.8 Q ss_pred CEEECCC--CCCEEEECCCCC Q ss_conf 8899888--882136546768 Q gi|254780167|r 47 NEKHCPY--CSTLYHFDSSLD 65 (78) Q Consensus 47 ~~v~C~Y--C~~~fv~~~~l~ 65 (78) .+-.|+| |+++|...+.|+ T Consensus 2 kPf~C~~~gC~k~F~~~~~L~ 22 (32) T 1zfd_A 2 RPYSCDHPGCDKAFVRNHDLI 22 (32) T ss_dssp CSBCCCCTTCCCCBSSSHHHH T ss_pred CCEECCCCCCCCEECCHHHHH T ss_conf 385797899897738774889 No 48 >2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=31.39 E-value=8.6 Score=18.62 Aligned_cols=21 Identities=24% Similarity=0.494 Sum_probs=17.2 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|...+.|. T Consensus 9 GeKpy~C~~Cgk~F~~~~~L~ 29 (46) T 2em3_A 9 GEKPYECKVCSKAFTQKAHLA 29 (46) T ss_dssp SCCSEECSSSCCEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 996958999999848889999 No 49 >1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Probab=31.37 E-value=7.5 Score=18.93 Aligned_cols=18 Identities=22% Similarity=0.394 Sum_probs=8.5 Q ss_pred CEEECCCCCCEEEECCCC Q ss_conf 889988888213654676 Q gi|254780167|r 47 NEKHCPYCSTLYHFDSSL 64 (78) Q Consensus 47 ~~v~C~YC~~~fv~~~~l 64 (78) .+-.|.+|++.|.....| T Consensus 13 kpy~C~~C~k~f~~~~~L 30 (72) T 1x6e_A 13 KPYGCVECGKAFSRSSIL 30 (72) T ss_dssp CCEECSSSCCEESSHHHH T ss_pred CCCCCCCCCCEECCHHHH T ss_conf 781799998873989999 No 50 >2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Probab=31.33 E-value=9.1 Score=18.48 Aligned_cols=21 Identities=24% Similarity=0.556 Sum_probs=17.3 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|..|++.|...+.|. T Consensus 9 GEKpy~C~~CgK~F~~~~~L~ 29 (46) T 2ema_A 9 GEKRYKCNECGKVFSRNSQLS 29 (46) T ss_dssp TSCCEECSSSCCEESSHHHHH T ss_pred CCCCEECCCCCCEECCHHHHH T ss_conf 998948999898628788999 No 51 >2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=31.27 E-value=9.4 Score=18.39 Aligned_cols=21 Identities=24% Similarity=0.305 Sum_probs=17.4 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|..|++.|.+...|. T Consensus 9 gEkpy~C~~Cgk~F~~~~~L~ 29 (46) T 2eoo_A 9 GERPYGCNECGKNFGRHSHLI 29 (46) T ss_dssp CCCCEECSSSCCEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 997978998899858788999 No 52 >2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=31.11 E-value=9.6 Score=18.35 Aligned_cols=21 Identities=24% Similarity=0.420 Sum_probs=17.6 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|..|++.|...+.|. T Consensus 9 GEkpy~C~~Cgk~F~~~s~L~ 29 (46) T 2ytg_A 9 GEKPFKCGECGKSYNQRVHLT 29 (46) T ss_dssp SCCSEECTTTCCEESSSHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 997968999998618788999 No 53 >2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Probab=31.04 E-value=6.1 Score=19.41 Aligned_cols=17 Identities=29% Similarity=0.585 Sum_probs=8.8 Q ss_pred EEECCCCCCEEEECCCC Q ss_conf 89988888213654676 Q gi|254780167|r 48 EKHCPYCSTLYHFDSSL 64 (78) Q Consensus 48 ~v~C~YC~~~fv~~~~l 64 (78) +-.|++|++.|.....| T Consensus 74 py~C~~C~k~F~~~~~L 90 (129) T 2wbt_A 74 QFVCPLCLMPFSSSVSL 90 (129) T ss_dssp SEECTTTCCEESSHHHH T ss_pred CEECCCCCCCCCCHHHH T ss_conf 81889999871874461 No 54 >2be7_D Aspartate carbamoyltransferase regulatory chain; atcase, psychrophilic, cold adaptation, allosteric, holoenzyme; 2.85A {Moritella profunda} Probab=30.91 E-value=16 Score=17.12 Aligned_cols=26 Identities=23% Similarity=0.474 Sum_probs=17.1 Q ss_pred CCEEEEECCCCC-EEECCCCCCEEEEC Q ss_conf 867999959998-89988888213654 Q gi|254780167|r 36 HPHVFINMGEEN-EKHCPYCSTLYHFD 61 (78) Q Consensus 36 HP~V~l~l~~~~-~v~C~YC~~~fv~~ 61 (78) -++.|+..+++. ...|-||++.|..+ T Consensus 121 ~~~f~~~~~~~~~~~rC~YCe~~~~~~ 147 (153) T 2be7_D 121 TSSFSIKKTKGNIGLKCKYCEKTFSKD 147 (153) T ss_dssp CCCEEEEEETTEEEEEETTTCCEEEHH T ss_pred CCEEEEEECCCCCEEEEECCCCCCCHH T ss_conf 734999954898589917899793675 No 55 >2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=30.86 E-value=9.7 Score=18.33 Aligned_cols=22 Identities=23% Similarity=0.394 Sum_probs=17.7 Q ss_pred CCCEEECCCCCCEEEECCCCCC Q ss_conf 9988998888821365467684 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78) .+++-.|..|++.|...+.|.. T Consensus 9 GeKpy~C~~CgK~F~~~s~L~~ 30 (46) T 2ytp_A 9 GERHYECSECGKAFARKSTLIM 30 (46) T ss_dssp CCCCEECSSSCCEESSHHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHHH T ss_conf 9889488998983466899998 No 56 >2waq_P DNA-directed RNA polymerase RPO12 subunit; multi-subunit, transcription; 3.35A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 3hkz_P Probab=30.76 E-value=14 Score=17.41 Aligned_cols=15 Identities=33% Similarity=0.733 Sum_probs=11.4 Q ss_pred EEECCCCCCEEEECC Q ss_conf 899888882136546 Q gi|254780167|r 48 EKHCPYCSTLYHFDS 62 (78) Q Consensus 48 ~v~C~YC~~~fv~~~ 62 (78) .+-|||||-+-++.- T Consensus 23 ~IrCPyCGfri~~kv 37 (48) T 2waq_P 23 GVRCPYCGYKIIFMV 37 (48) T ss_dssp SSSCTTTCCCCEECC T ss_pred CCCCCCCCCEEEEEE T ss_conf 864463571899984 No 57 >2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Probab=30.67 E-value=8.9 Score=18.51 Aligned_cols=21 Identities=24% Similarity=0.400 Sum_probs=17.5 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|..|++.|...+.|. T Consensus 8 GeKPy~C~~CgK~F~~~~~L~ 28 (42) T 2epc_A 8 GETPYLCGQCGKSFTQRGSLA 28 (42) T ss_dssp SSCCEECSSSCCEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 988988899998467678988 No 58 >1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A Probab=30.57 E-value=9.5 Score=18.38 Aligned_cols=17 Identities=24% Similarity=0.540 Sum_probs=13.4 Q ss_pred EECCCCCCEEEECCCCC Q ss_conf 99888882136546768 Q gi|254780167|r 49 KHCPYCSTLYHFDSSLD 65 (78) Q Consensus 49 v~C~YC~~~fv~~~~l~ 65 (78) -.||-|+++|.....|. T Consensus 3 f~C~~C~krFmRSDHLs 19 (29) T 1rik_A 3 FACPECPKRFMRSDHLT 19 (29) T ss_dssp EECSSSSCEESCSHHHH T ss_pred CCCCCCCCCCCHHHHHH T ss_conf 40777766422258889 No 59 >2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=30.32 E-value=9.8 Score=18.29 Aligned_cols=21 Identities=19% Similarity=0.425 Sum_probs=17.6 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|.+|++.|...++|. T Consensus 9 geKpy~C~~C~k~F~~~~~L~ 29 (46) T 2emf_A 9 GGKHFECTECGKAFTRKSTLS 29 (46) T ss_dssp SSCCEECSSSCCEESCHHHHH T ss_pred CCCCCCCCCCCCCCCCHHHHH T ss_conf 997818989999666648899 No 60 >2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=30.29 E-value=7.5 Score=18.92 Aligned_cols=21 Identities=29% Similarity=0.634 Sum_probs=17.5 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|..|++.|.....|+ T Consensus 9 Gekpy~C~~C~k~F~~~~~L~ 29 (46) T 2ep0_A 9 GEKPYKCDVCHKSFRYGSSLT 29 (46) T ss_dssp TCCSEECSSSCCEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 997928989799868778999 No 61 >2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Probab=30.27 E-value=9.5 Score=18.37 Aligned_cols=21 Identities=24% Similarity=0.504 Sum_probs=17.5 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|..|++.|...++|. T Consensus 9 GeKPy~C~~Cgk~F~~~s~L~ 29 (46) T 2emj_A 9 GEKPFECAECGKSFSISSQLA 29 (46) T ss_dssp CCCSEECSSSSCEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 977938998898617689999 No 62 >2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=30.13 E-value=9.5 Score=18.37 Aligned_cols=21 Identities=19% Similarity=0.276 Sum_probs=17.1 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|.+|++.|...+.|. T Consensus 9 gekpy~C~~C~k~F~~~~~L~ 29 (46) T 2enc_A 9 GEKPFKCEECGKGFYTNSQCY 29 (46) T ss_dssp CCCSEECSSSCCEESSHHHHH T ss_pred CCCCCCCCCCCCCCCCHHHHH T ss_conf 988818998997647678888 No 63 >2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=30.11 E-value=11 Score=18.05 Aligned_cols=21 Identities=24% Similarity=0.458 Sum_probs=17.4 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|.....|. T Consensus 9 geKpy~C~~Cgk~F~~~s~L~ 29 (44) T 2yu5_A 9 GENPFKCSKCDRVFTQRNYLV 29 (44) T ss_dssp CCCSEECSSSSCEESSSHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 986946899899608668999 No 64 >2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=30.08 E-value=4.8 Score=19.99 Aligned_cols=21 Identities=19% Similarity=0.390 Sum_probs=17.0 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|...+.|. T Consensus 7 GeKpy~C~~CgK~F~~~s~L~ 27 (42) T 2yte_A 7 GEKPYSCAECKETFSDNNRLV 27 (42) T ss_dssp SCCSCBCTTTCCBCSSHHHHH T ss_pred CCCCEECCCCCCEECCHHHHH T ss_conf 988962899889528646867 No 65 >2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious disease, electron transport; NMR {Mycobacterium tuberculosis} Probab=30.01 E-value=27 Score=15.90 Aligned_cols=31 Identities=19% Similarity=0.500 Sum_probs=17.8 Q ss_pred CCCCCEEECCCCCCEEEECCCCCC-CCCCCCCCE Q ss_conf 599988998888821365467684-446880024 Q gi|254780167|r 43 MGEENEKHCPYCSTLYHFDSSLDS-KETLPVGCL 75 (78) Q Consensus 43 l~~~~~v~C~YC~~~fv~~~~l~~-~es~P~~c~ 75 (78) +.+-+.-.|.-|+ |+|++.... .+-.||+-. T Consensus 22 ~~e~~~y~C~~Cg--yiYDp~~GD~~~gippGT~ 53 (81) T 2kn9_A 22 MNDYKLFRCIQCG--FEYDEALGWPEDGIAAGTR 53 (81) T ss_dssp SSCCCEEEETTTC--CEEETTTCBTTTTBCTTCC T ss_pred CCCCCEEECCCCC--EEECCCCCCCCCCCCCCCC T ss_conf 6677759829999--3876665884568798897 No 66 >2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=29.82 E-value=9.4 Score=18.38 Aligned_cols=21 Identities=24% Similarity=0.547 Sum_probs=17.3 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|...+.|. T Consensus 9 GEKpy~C~~Cgk~F~~~~~l~ 29 (46) T 2eml_A 9 GEKPYECSVCGKAFSHRQSLS 29 (46) T ss_dssp SCCSEECSSSCCEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 997977898699808789999 No 67 >2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=29.48 E-value=7.7 Score=18.86 Aligned_cols=21 Identities=24% Similarity=0.412 Sum_probs=17.4 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|..|++.|.+...|. T Consensus 9 GEKpy~C~~Cgk~F~~~~~L~ 29 (46) T 2en6_A 9 GEKPYGCNECGKTFSQKSILS 29 (46) T ss_dssp SSCCEEETTTTEEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 998979989899777889999 No 68 >2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=29.33 E-value=8.4 Score=18.65 Aligned_cols=21 Identities=24% Similarity=0.487 Sum_probs=17.6 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|...+.|+ T Consensus 9 GeKpy~C~~C~k~F~~~~~L~ 29 (46) T 2yto_A 9 GEKPYKCSDCGKAFTRKSGLH 29 (46) T ss_dssp SCCCEECSSSCCEESSHHHHH T ss_pred CCCCEECCCCCCEECCHHHHH T ss_conf 988958899989708758999 No 69 >2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=29.29 E-value=10 Score=18.22 Aligned_cols=21 Identities=24% Similarity=0.528 Sum_probs=17.0 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|..|+..|.....|. T Consensus 6 geKPykC~~C~k~F~~~~~L~ 26 (36) T 2elt_A 6 SGKPYKCPQCSYASAIKANLN 26 (36) T ss_dssp CCCSEECSSSSCEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 993986899988719889999 No 70 >2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=29.20 E-value=12 Score=17.84 Aligned_cols=21 Identities=19% Similarity=0.409 Sum_probs=17.4 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|..|++.|.+...|. T Consensus 9 ~EKpy~C~~C~k~F~~~~~L~ 29 (46) T 2eoy_A 9 KEKCFKCNKCEKTFSCSKYLT 29 (46) T ss_dssp CSCCEECSSSCCEESSSHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 997918999998848879999 No 71 >2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=29.11 E-value=11 Score=17.92 Aligned_cols=21 Identities=24% Similarity=0.450 Sum_probs=17.5 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|..|++.|.....|. T Consensus 9 gekpy~C~~Cgk~F~~~s~L~ 29 (46) T 2en3_A 9 GEKPFQCKECGMNFSWSCSLF 29 (46) T ss_dssp CCCSEECSSSCCEESSSHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 998968999999887688999 No 72 >2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Probab=28.86 E-value=7.8 Score=18.84 Aligned_cols=21 Identities=24% Similarity=0.460 Sum_probs=17.3 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|.....|+ T Consensus 7 GEkpy~C~~Cgk~F~~~s~L~ 27 (42) T 2el5_A 7 GENPYECSECGKAFNRKDQLI 27 (42) T ss_dssp SCCSEECSSSCCEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 997987998799807758999 No 73 >2j6a_A Protein TRM112; translation termination, methyltransferase, transferase, ERF1, nuclear protein, protein methylation; 1.7A {Saccharomyces cerevisiae} Probab=28.79 E-value=20 Score=16.62 Aligned_cols=19 Identities=26% Similarity=0.681 Sum_probs=15.2 Q ss_pred CCCEEECCCCCCEEEECCC Q ss_conf 9988998888821365467 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSS 63 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~ 63 (78) .+|.-+||=||+.|-.+.+ T Consensus 106 ~EG~LvCp~cGr~ypI~~G 124 (141) T 2j6a_A 106 AEGEMKCRNCGHIYYIKNG 124 (141) T ss_dssp EEEEEECTTTCCEEEEETT T ss_pred EECEEECCCCCCCCCCCCC T ss_conf 6254887999987314258 No 74 >2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=28.68 E-value=11 Score=18.08 Aligned_cols=21 Identities=24% Similarity=0.374 Sum_probs=17.3 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|.....|. T Consensus 9 GeKpy~C~~Cgk~F~~~s~L~ 29 (46) T 2emp_A 9 GVKPYMCNECGKAFSVYSSLT 29 (46) T ss_dssp CCCSEECSSSCCEESCHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 983837899999347588999 No 75 >1fqt_A Rieske-type ferredoxin of biphenyl dioxygenase; 2Fe-2S cluster, beta sandwich, oxidoreductase; 1.60A {Burkholderia xenovorans LB400} SCOP: b.33.1.1 PDB: 2e4q_A 2e4p_A 2yvj_B* Probab=28.03 E-value=27 Score=15.88 Aligned_cols=46 Identities=9% Similarity=0.021 Sum_probs=26.0 Q ss_pred EEECCEEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCEEEECCC Q ss_conf 9946549999378998898679999599988998888821365467 Q gi|254780167|r 18 IKIGVKKFMCAGTSPPLDHPHVFINMGEENEKHCPYCSTLYHFDSS 63 (78) Q Consensus 18 I~v~~~~v~CdGg~g~lgHP~V~l~l~~~~~v~C~YC~~~fv~~~~ 63 (78) +..+.+.++-+.-=+-.|.|...-.+.+++.+.|||.+.+|-++.. T Consensus 33 ~r~~~~~~A~~~~CpH~g~~L~~g~~~~~~~i~Cp~H~~~f~l~tG 78 (112) T 1fqt_A 33 FNVDGELFATQDRCTHGDWSLSDGGYLEGDVVECSLHMGKFCVRTG 78 (112) T ss_dssp EEETTEEEEEESBCTTSSCBSSTTCCEETTEEECTTTCCEEETTTC T ss_pred EEECCEEEEEECCCCCCCCEEECEEEECCCEEEECCCCCEEECCCE T ss_conf 9989999999774887786830002736985580886999989970 No 76 >1jd5_A DIAP1, apoptosis 1 inhibitor; IAP, caspase activation; 1.90A {Drosophila melanogaster} SCOP: g.52.1.1 PDB: 1jd4_A 1jd6_A 1q4q_A Probab=27.68 E-value=30 Score=15.66 Aligned_cols=20 Identities=20% Similarity=0.373 Sum_probs=15.1 Q ss_pred EEECCCCCEEECCCCCCEEE Q ss_conf 99959998899888882136 Q gi|254780167|r 40 FINMGEENEKHCPYCSTLYH 59 (78) Q Consensus 40 ~l~l~~~~~v~C~YC~~~fv 59 (78) |+-.+....+.|-||+.... T Consensus 52 Fyytg~~D~v~Cf~C~~~l~ 71 (124) T 1jd5_A 52 FFYTGVGDRVRCFSCGGGLM 71 (124) T ss_dssp EEECSSTTCEEETTTCCEEE T ss_pred CEECCCCCEEEECCCCCEEC T ss_conf 88759999789655498945 No 77 >2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=27.65 E-value=12 Score=17.84 Aligned_cols=21 Identities=19% Similarity=0.442 Sum_probs=17.3 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|..|++.|....+|. T Consensus 9 GEKpy~C~~Cgk~F~~~s~L~ 29 (46) T 2yrj_A 9 GEKPYRCGECGKAFAQKANLT 29 (46) T ss_dssp CCCCEECSSSCCEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 997928999998408799999 No 78 >2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=27.51 E-value=9.5 Score=18.37 Aligned_cols=21 Identities=19% Similarity=0.450 Sum_probs=17.0 Q ss_pred CCCEEECCC--CCCEEEECCCCC Q ss_conf 998899888--882136546768 Q gi|254780167|r 45 EENEKHCPY--CSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~Y--C~~~fv~~~~l~ 65 (78) .+.+-.|.+ |++.|.....|+ T Consensus 9 GekP~~C~~~~C~k~F~~~~~L~ 31 (48) T 2ent_A 9 GEKPFACTWPGCGWRFSRSDELS 31 (48) T ss_dssp CCCCEECCSSSCCCEESSHHHHH T ss_pred CCCCEECCCCCCCCEECCHHHHH T ss_conf 99795898889899708788888 No 79 >2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=27.23 E-value=9.3 Score=18.43 Aligned_cols=21 Identities=24% Similarity=0.436 Sum_probs=17.3 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|..|++.|.....|+ T Consensus 9 geKpy~C~~Cgk~F~~~s~L~ 29 (44) T 2epv_A 9 GEKPYECNECGKAFIWKSLLI 29 (44) T ss_dssp CCCSEECSSSCCEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 998967899898818777878 No 80 >2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Probab=27.16 E-value=11 Score=18.05 Aligned_cols=18 Identities=17% Similarity=0.597 Sum_probs=8.6 Q ss_pred CEEECCCCCCEEEECCCC Q ss_conf 889988888213654676 Q gi|254780167|r 47 NEKHCPYCSTLYHFDSSL 64 (78) Q Consensus 47 ~~v~C~YC~~~fv~~~~l 64 (78) .+-.|++|++.|.....| T Consensus 39 k~~~C~~C~k~F~~~~~L 56 (66) T 2drp_A 39 KVYPCPFCFKEFTRKDNM 56 (66) T ss_dssp CCEECTTTCCEESCHHHH T ss_pred CCEECCCCCCEECCHHHH T ss_conf 580898989980898899 No 81 >2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=27.13 E-value=11 Score=17.92 Aligned_cols=21 Identities=24% Similarity=0.588 Sum_probs=17.3 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|.....|. T Consensus 9 GEKpy~C~~CgK~F~~~~~L~ 29 (46) T 2eme_A 9 GEKPYVCDYCGKAFGLSAELV 29 (46) T ss_dssp CCCSEECSSSCCEESSHHHHH T ss_pred CCCCEECCCCCCEECCHHHHH T ss_conf 988978999998608899999 No 82 >2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=27.12 E-value=35 Score=15.26 Aligned_cols=20 Identities=20% Similarity=0.614 Sum_probs=13.5 Q ss_pred CCEEECCCCCCEEEECCCCC Q ss_conf 98899888882136546768 Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~ 65 (78) +..-.|..|++.|.....|. T Consensus 16 ek~~~C~~Cgk~F~~~~~l~ 35 (73) T 2ctu_A 16 DRSQKCSKCGIIFIRRSTLS 35 (73) T ss_dssp CSEEECSSSCCEEECCCCCC T ss_pred CCCEECCCCCCCCCCCCCCC T ss_conf 98812884552542034213 No 83 >2i3h_A Baculoviral IAP repeat-containing protein 7; zinc binding, peptide complex, apoptosis inhibition, peptidomimetic, small molecule, drug design, inhibitor/apoptosis complex; HET: BTB; 1.62A {Homo sapiens} SCOP: g.52.1.1 PDB: 2i3i_A* 3f7h_A* 3f7i_A* 3gt9_A* 3gta_A* 1tw6_A* 3f7g_A* 1oxn_A* 1oxq_A* 1oy7_A* Probab=27.11 E-value=31 Score=15.57 Aligned_cols=20 Identities=20% Similarity=0.629 Sum_probs=14.9 Q ss_pred EEECCCCCEEECCCCCCEEE Q ss_conf 99959998899888882136 Q gi|254780167|r 40 FINMGEENEKHCPYCSTLYH 59 (78) Q Consensus 40 ~l~l~~~~~v~C~YC~~~fv 59 (78) |+-.+.+..+.|-||+.... T Consensus 74 FYYtG~~D~V~Cf~C~~~L~ 93 (133) T 2i3h_A 74 FFHTGHQDKVRCFFCYGGLQ 93 (133) T ss_dssp EEECSSTTCEEETTTCCEEE T ss_pred CEECCCCCEEEECCCCCCCC T ss_conf 98829999689467788927 No 84 >2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Probab=27.00 E-value=11 Score=18.08 Aligned_cols=20 Identities=20% Similarity=0.360 Sum_probs=14.4 Q ss_pred CCEEECCCCCCEEEECCCCC Q ss_conf 98899888882136546768 Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~ 65 (78) +.+-.|++|++.|.....|. T Consensus 28 ~k~~~C~~C~~~F~~~~~l~ 47 (60) T 2adr_A 28 EKPYPCGLCNRAFTRRDLLI 47 (60) T ss_dssp SCSEECTTTCCEESSHHHHH T ss_pred CCCEECCCCCCEECCHHHHH T ss_conf 88847898989948889999 No 85 >1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 Probab=26.93 E-value=7.9 Score=18.81 Aligned_cols=15 Identities=27% Similarity=0.684 Sum_probs=12.3 Q ss_pred ECCCCCCEEEECCCC Q ss_conf 988888213654676 Q gi|254780167|r 50 HCPYCSTLYHFDSSL 64 (78) Q Consensus 50 ~C~YC~~~fv~~~~l 64 (78) .|+.|+++|.....| T Consensus 4 ~C~~C~k~FsRSDhL 18 (33) T 1rim_A 4 ACPECPKRFMRSDHL 18 (33) T ss_dssp CCSSSCCCCSSHHHH T ss_pred CCCCCCCCCCHHHHH T ss_conf 787777731437889 No 86 >2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=26.85 E-value=4.8 Score=20.00 Aligned_cols=21 Identities=24% Similarity=0.428 Sum_probs=17.0 Q ss_pred CCEEECCCCCCEEEECCCCCC Q ss_conf 988998888821365467684 Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLDS 66 (78) Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~~ 66 (78) +.+-.|..|++.|...+.|.. T Consensus 9 EKPy~C~~Cgk~F~~~~~L~~ 29 (42) T 2ytb_A 9 EKPYRCDQCGKAFSQKGSLIV 29 (42) T ss_dssp CCSBCCTTTTCCBSSHHHHHT T ss_pred CCCEECCCCCCCCCCHHHHHH T ss_conf 899789998886486678898 No 87 >2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=26.42 E-value=12 Score=17.83 Aligned_cols=21 Identities=24% Similarity=0.392 Sum_probs=17.3 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|...+.|. T Consensus 9 GeKPy~C~~Cgk~F~~~s~L~ 29 (46) T 2em4_A 9 GQRPYECIECGKAFKTKSSLI 29 (46) T ss_dssp CSSSEECSSSCCEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 997957898888748667878 No 88 >2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=26.23 E-value=12 Score=17.83 Aligned_cols=21 Identities=29% Similarity=0.449 Sum_probs=17.3 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|.+|++.|.....|. T Consensus 9 geKpy~C~~C~k~F~~~~~L~ 29 (46) T 2em8_A 9 GEKPYKCVECGKGYKRRLDLD 29 (46) T ss_dssp SCCSEECSSSCCEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 998808998897847569999 No 89 >2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens} Probab=26.01 E-value=29 Score=15.74 Aligned_cols=31 Identities=32% Similarity=0.602 Sum_probs=24.5 Q ss_pred ECCCCCCCCCEEEEECCCCCEEECCCCCCEE Q ss_conf 3789988986799995999889988888213 Q gi|254780167|r 28 AGTSPPLDHPHVFINMGEENEKHCPYCSTLY 58 (78) Q Consensus 28 dGg~g~lgHP~V~l~l~~~~~v~C~YC~~~f 58 (78) .|..+.+..||.|....-.....|-+|++.- T Consensus 3 sg~~~k~~~pH~F~~~~~~~~~~C~~C~~~i 33 (65) T 2enz_A 3 SGSSGKIDMPHRFKVYNYKSPTFCEHCGTLL 33 (65) T ss_dssp SSCCCCCCCCCCEEECCCCSCCBCSSSCCBC T ss_pred CCCCCCCCCCCEEEECCCCCCCCCCCCCCCC T ss_conf 8868878887356765489997984568703 No 90 >2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=25.78 E-value=8 Score=18.78 Aligned_cols=22 Identities=14% Similarity=0.386 Sum_probs=17.7 Q ss_pred CCCEEECCCCCCEEEECCCCCC Q ss_conf 9988998888821365467684 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78) .+.+-.|..|++.|.....|+. T Consensus 9 GeKpy~C~~C~k~F~~~~~L~~ 30 (45) T 2epu_A 9 GQKPFECTHCGKSFRAKGNLVT 30 (45) T ss_dssp SCCSEEETTTTEEESSHHHHHH T ss_pred CCCCCCCCCCCCCCCCHHHHHH T ss_conf 9988389988988486176887 No 91 >2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4 Probab=25.68 E-value=13 Score=17.70 Aligned_cols=17 Identities=24% Similarity=0.594 Sum_probs=13.2 Q ss_pred EEECCCCCCEEEECCCC Q ss_conf 89988888213654676 Q gi|254780167|r 48 EKHCPYCSTLYHFDSSL 64 (78) Q Consensus 48 ~v~C~YC~~~fv~~~~l 64 (78) ..+|.||+.+|-.+-++ T Consensus 13 ~~eC~~C~vkYs~~~sv 29 (55) T 2yrk_A 13 KPECTLCGVKYSARLSI 29 (55) T ss_dssp CSCCTTTTCCCCSSSCH T ss_pred CCCCCCCCEEECCCCCH T ss_conf 45377446130564333 No 92 >1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A Probab=25.63 E-value=30 Score=15.66 Aligned_cols=29 Identities=21% Similarity=0.537 Sum_probs=17.2 Q ss_pred CCEEECCCCCCEEEECCCCCC-CCCCCCCCEE Q ss_conf 988998888821365467684-4468800246 Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLDS-KETLPVGCLL 76 (78) Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~~-~es~P~~c~~ 76 (78) .+.-.|..|+ |+|++.... ....||+-.| T Consensus 5 ~~ky~C~~Cg--yiYDp~~Gd~~~gIppGT~F 34 (70) T 1dx8_A 5 EGKYECEACG--YIYEPEKGDKFAGIPPGTPF 34 (70) T ss_dssp SSCEEETTTC--CEECTTTCCTTTTCCSSCCG T ss_pred CCCEEECCCC--EEECCCCCCCCCCCCCCCCH T ss_conf 8847819999--08786667846687988996 No 93 >2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=25.40 E-value=6.7 Score=19.21 Aligned_cols=21 Identities=24% Similarity=0.339 Sum_probs=16.8 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|.....|. T Consensus 9 geKpy~C~~C~k~F~~~~~L~ 29 (46) T 2emz_A 9 GERPFKCNECGKGFGRRSHLA 29 (46) T ss_dssp CCCSCCCSSSCCCCSSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 988968998898848889999 No 94 >2qra_D XIAP, baculoviral IAP repeat-containing protein 4, inhibitor; apoptosis, signaling protein, zinc binding; 2.50A {Homo sapiens} Probab=25.26 E-value=32 Score=15.50 Aligned_cols=20 Identities=25% Similarity=0.567 Sum_probs=15.5 Q ss_pred EEECCCCCEEECCCCCCEEE Q ss_conf 99959998899888882136 Q gi|254780167|r 40 FINMGEENEKHCPYCSTLYH 59 (78) Q Consensus 40 ~l~l~~~~~v~C~YC~~~fv 59 (78) |+-.+....+.|.||+.... T Consensus 64 FYYtG~~D~V~Cf~C~~~l~ 83 (111) T 2qra_D 64 FLYTGEGDTVRCFSCHAAVD 83 (111) T ss_dssp EEECSSTTCEEETTTCCEEC T ss_pred EEEECCCCEEEECCCCCEEC T ss_conf 39818999789576688945 No 95 >2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=24.81 E-value=14 Score=17.47 Aligned_cols=21 Identities=19% Similarity=0.332 Sum_probs=17.4 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|...+.|. T Consensus 9 geKpy~C~~CgK~F~~~s~L~ 29 (46) T 2em7_A 9 GEKPYKCEECGKGFICRRDLY 29 (46) T ss_dssp CCCSEECSSSCCEESCHHHHH T ss_pred CCCCEECCCCCCEECCHHHHH T ss_conf 988978899898618678899 No 96 >2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=24.43 E-value=14 Score=17.37 Aligned_cols=21 Identities=29% Similarity=0.501 Sum_probs=17.4 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|...+.|. T Consensus 9 GeKpy~C~~Cgk~F~~~s~L~ 29 (46) T 2eow_A 9 GEKPYKCNECGKAFRARSSLA 29 (46) T ss_dssp CCCCEECTTSCCEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 996967899899618879999 No 97 >2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Probab=23.96 E-value=8.6 Score=18.61 Aligned_cols=22 Identities=23% Similarity=0.378 Sum_probs=17.5 Q ss_pred CCCEEECCCCCCEEEECCCCCC Q ss_conf 9988998888821365467684 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78) .+++-.|..|++.|.....|+. T Consensus 9 GeKpy~C~~Cgk~F~~~~~L~~ 30 (46) T 2ely_A 9 GEKPFKCVECGKGFSRRSALNV 30 (46) T ss_dssp CCCSBCCSSSCCCBSSTTHHHH T ss_pred CCCCEECCCCCCCCCCHHHHHH T ss_conf 9979288999995377899999 No 98 >2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Probab=23.95 E-value=15 Score=17.30 Aligned_cols=17 Identities=24% Similarity=0.307 Sum_probs=8.7 Q ss_pred EEECCCCCCEEEECCCC Q ss_conf 89988888213654676 Q gi|254780167|r 48 EKHCPYCSTLYHFDSSL 64 (78) Q Consensus 48 ~v~C~YC~~~fv~~~~l 64 (78) .-.|++|+..|.....| T Consensus 50 ~y~C~~C~~~f~~~~~L 66 (102) T 2ghf_A 50 SYVCVECNFLTKRYDAL 66 (102) T ss_dssp CEEETTTTEEESSTHHH T ss_pred CCCCCCCCCEECCHHHH T ss_conf 87989999840857997 No 99 >2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=23.73 E-value=14 Score=17.43 Aligned_cols=22 Identities=27% Similarity=0.551 Sum_probs=17.6 Q ss_pred CCCEEECCCCCCEEEECCCCCC Q ss_conf 9988998888821365467684 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78) .+.+-.|..|++.|.....|.. T Consensus 9 GEKpy~C~~Cgk~F~~~~~L~~ 30 (46) T 2eor_A 9 GEKPYNCEECGKAFIHDSQLQE 30 (46) T ss_dssp CCCSEECTTTCCEESSHHHHHH T ss_pred CCCCEECCCCCCEECCHHHHHH T ss_conf 9979589998986386599999 No 100 >2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=23.69 E-value=8.1 Score=18.76 Aligned_cols=21 Identities=19% Similarity=0.357 Sum_probs=16.9 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|.+|++.|.....|. T Consensus 9 gekpy~C~~Cgk~F~~~~~L~ 29 (47) T 2epx_A 9 GKKPYECIECGKAFIQNTSLI 29 (47) T ss_dssp CCCSBCCSSSCCCBSSHHHHH T ss_pred CCCCEECCCCCCEECCHHHHH T ss_conf 998948999999938668999 No 101 >2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=23.69 E-value=15 Score=17.31 Aligned_cols=21 Identities=24% Similarity=0.376 Sum_probs=17.4 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|...+.|. T Consensus 9 GEKpy~C~~Cgk~F~~~s~L~ 29 (46) T 2emy_A 9 GENPYECHECGKAFSRKYQLI 29 (46) T ss_dssp SSCCEECSSSCCEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 998958899888508789999 No 102 >1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 Probab=23.63 E-value=24 Score=16.21 Aligned_cols=14 Identities=14% Similarity=0.634 Sum_probs=11.1 Q ss_pred CEEECCCCCCEEEE Q ss_conf 88998888821365 Q gi|254780167|r 47 NEKHCPYCSTLYHF 60 (78) Q Consensus 47 ~~v~C~YC~~~fv~ 60 (78) ..-.|.+|++.|.- T Consensus 5 r~~~C~~C~k~F~s 18 (39) T 1njq_A 5 RSYTCSFCKREFRS 18 (39) T ss_dssp SSEECTTTCCEESS T ss_pred CCEECCCCCCCCCC T ss_conf 75098998898478 No 103 >2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Probab=23.38 E-value=9.7 Score=18.32 Aligned_cols=22 Identities=14% Similarity=0.419 Sum_probs=17.6 Q ss_pred CCCEEECCCCCCEEEECCCCCC Q ss_conf 9988998888821365467684 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78) .+++-.|..|++.|.....|+- T Consensus 9 ~eKpy~C~~CgK~F~~~s~L~~ 30 (48) T 2epr_A 9 TRKQVACEICGKIFRDVYHLNR 30 (48) T ss_dssp CCCSEEETTTTEEESSHHHHHH T ss_pred CCCCCCCCCCCCCCCCHHHHHH T ss_conf 9968288989977487689899 No 104 >2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=23.33 E-value=6.5 Score=19.27 Aligned_cols=21 Identities=19% Similarity=0.256 Sum_probs=16.7 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|.+|++.|.....|. T Consensus 9 geKpy~C~~Cgk~F~~~s~L~ 29 (44) T 2en7_A 9 GMKPYVCNECGKAFRSKSYLI 29 (44) T ss_dssp SSSSSCCTTTCCCCSSHHHHH T ss_pred CCCCCCCCCCCCCCCCHHHHH T ss_conf 998818899989978778989 No 105 >2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=23.25 E-value=15 Score=17.28 Aligned_cols=20 Identities=20% Similarity=0.454 Sum_probs=16.9 Q ss_pred CCEEECCCCCCEEEECCCCC Q ss_conf 98899888882136546768 Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~ 65 (78) +++-.|..|++.|...+.|. T Consensus 10 EKpy~C~~Cgk~F~~~s~L~ 29 (46) T 2em2_A 10 EKPFKCKECGKAFRQNIHLA 29 (46) T ss_dssp CCSEECSSSCCEESSHHHHH T ss_pred CCCEECCCCCCCCCCHHHHH T ss_conf 98979999899638779999 No 106 >2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=23.19 E-value=12 Score=17.76 Aligned_cols=21 Identities=24% Similarity=0.444 Sum_probs=17.4 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|.....|+ T Consensus 9 GEKpy~C~~C~K~F~~~~~L~ 29 (46) T 2ytf_A 9 GEKPFECSECQKAFNTKSNLI 29 (46) T ss_dssp CCCSEECSSSCCEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 967988999899868888999 No 107 >2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=22.97 E-value=15 Score=17.23 Aligned_cols=21 Identities=24% Similarity=0.594 Sum_probs=17.3 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|.....|. T Consensus 9 geKpy~C~~C~k~F~~~~~L~ 29 (46) T 2ytd_A 9 GEKPYKCSECGKAFHRHTHLN 29 (46) T ss_dssp CCCSEECSSSCCEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 959968999998847768888 No 108 >2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus} Probab=22.90 E-value=21 Score=16.49 Aligned_cols=16 Identities=13% Similarity=0.526 Sum_probs=12.4 Q ss_pred EEECCCCCCEEEECCC Q ss_conf 8998888821365467 Q gi|254780167|r 48 EKHCPYCSTLYHFDSS 63 (78) Q Consensus 48 ~v~C~YC~~~fv~~~~ 63 (78) +-.|.-||++|-++.. T Consensus 3 py~c~~c~krfslkhq 18 (28) T 2kvf_A 3 PYSCSVCGKRFSLKHQ 18 (28) T ss_dssp SEECSSSCCEESCHHH T ss_pred CCCCCCCCCCCCHHHH T ss_conf 6301643330011343 No 109 >2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=22.76 E-value=33 Score=15.42 Aligned_cols=21 Identities=24% Similarity=0.710 Sum_probs=14.0 Q ss_pred CCEEECCCCCCEEEECCCCCC Q ss_conf 988998888821365467684 Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLDS 66 (78) Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~~ 66 (78) ...+.|.||+..|.++.--.. T Consensus 8 kR~v~C~~C~~~~~~~~~~~H 28 (66) T 2eod_A 8 KRTQPCTYCTKEFVFDTIQSH 28 (66) T ss_dssp CCEEECSSSCCEEEHHHHHHH T ss_pred CCCCCCCCCCCCCCHHHHHHH T ss_conf 826659999881158899999 No 110 >2poi_A Baculoviral IAP repeat-containing protein 4; zinc finger, signaling protein/apoptosis complex; 1.80A {Homo sapiens} PDB: 2pop_B Probab=22.76 E-value=38 Score=15.08 Aligned_cols=19 Identities=21% Similarity=0.475 Sum_probs=14.1 Q ss_pred EECCCCCEEECCCCCCEEE Q ss_conf 9959998899888882136 Q gi|254780167|r 41 INMGEENEKHCPYCSTLYH 59 (78) Q Consensus 41 l~l~~~~~v~C~YC~~~fv 59 (78) +=.+....+.|.||+.... T Consensus 48 yytg~~D~V~Cf~C~~~l~ 66 (94) T 2poi_A 48 LYTGEGDTVRCFSCHAAVD 66 (94) T ss_dssp EECSSTTCEEETTTCCEEC T ss_pred EECCCCCEEEECCCCCEEC T ss_conf 8879998789486688937 No 111 >3m1d_A Baculoviral IAP repeat-containing protein 2; BIR, apoptosis, cytoplasm, polymorphism, zinc, zinc-FIN metal binding protein; 2.00A {Homo sapiens} PDB: 3m0a_D 3m0d_D Probab=22.64 E-value=38 Score=15.05 Aligned_cols=20 Identities=20% Similarity=0.554 Sum_probs=14.2 Q ss_pred EEECCCCCEEECCCCCCEEE Q ss_conf 99959998899888882136 Q gi|254780167|r 40 FINMGEENEKHCPYCSTLYH 59 (78) Q Consensus 40 ~l~l~~~~~v~C~YC~~~fv 59 (78) |+-.+.+..+.|.||+.... T Consensus 38 Fyytg~~D~v~Cf~C~~~l~ 57 (85) T 3m1d_A 38 FYYTGVNDKVKCFCCGLMLD 57 (85) T ss_dssp EEECSSTTCEEETTTCCEEC T ss_pred CEECCCCCEEEECCCCCEEC T ss_conf 88879999889596988913 No 112 >1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1 Probab=22.57 E-value=26 Score=15.96 Aligned_cols=19 Identities=26% Similarity=0.466 Sum_probs=9.9 Q ss_pred CCEEECCCCCCEEEECCCC Q ss_conf 9889988888213654676 Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSL 64 (78) Q Consensus 46 ~~~v~C~YC~~~fv~~~~l 64 (78) .+.-.|-||+..-+-+.+. T Consensus 37 ~~~F~C~~C~~el~ed~s~ 55 (62) T 1vd4_A 37 TGTFRCTFCHTEVEEDESA 55 (62) T ss_dssp TTEEBCSSSCCBCEECTTC T ss_pred CCEEEECCCCCEEECCCCC T ss_conf 8919736889996557753 No 113 >2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=22.53 E-value=15 Score=17.21 Aligned_cols=22 Identities=23% Similarity=0.386 Sum_probs=17.8 Q ss_pred CCCEEECCCCCCEEEECCCCCC Q ss_conf 9988998888821365467684 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78) .+++-.|..|++.|...+.|.. T Consensus 9 GeKpy~C~~Cgk~F~~~~~L~~ 30 (46) T 2yts_A 9 GEKPYICNECGKSFIQKSHLNR 30 (46) T ss_dssp SCCSEECSSSCCEESSHHHHHH T ss_pred CCCCEECCCCCCEECCHHHHHH T ss_conf 9979589999983078899999 No 114 >2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=22.51 E-value=9 Score=18.51 Aligned_cols=20 Identities=25% Similarity=0.577 Sum_probs=16.7 Q ss_pred CCEEECCCCCCEEEECCCCC Q ss_conf 98899888882136546768 Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~ 65 (78) +.+-.|..|++.|.....|. T Consensus 10 ekpy~C~~C~K~F~~~s~L~ 29 (46) T 2enh_A 10 EKPYECDVCRKAFSHHASLT 29 (46) T ss_dssp SSSCBCTTTCCBCSSSHHHH T ss_pred CCCEECCCCCCEECCHHHHH T ss_conf 88958898699708678978 No 115 >2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=22.47 E-value=17 Score=17.04 Aligned_cols=21 Identities=24% Similarity=0.490 Sum_probs=17.2 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|...+.|. T Consensus 9 Gekpy~C~~CgK~F~~~s~L~ 29 (46) T 2emi_A 9 GERHYECSECGKAFIQKSTLS 29 (46) T ss_dssp SCCCEECSSSCCEESSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 998928999998748678867 No 116 >2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Probab=22.47 E-value=7.1 Score=19.06 Aligned_cols=21 Identities=29% Similarity=0.453 Sum_probs=16.9 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|..|++.|.+...|. T Consensus 9 GeKpy~C~~C~k~F~~~~~L~ 29 (46) T 2em0_A 9 GEKTWKCRECDMCFSQASSLR 29 (46) T ss_dssp CCCCCCCSSSCCCCSSHHHHH T ss_pred CCCCEECCCCCCEECCHHHHH T ss_conf 987959999898727789999 No 117 >4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ... Probab=22.46 E-value=29 Score=15.68 Aligned_cols=24 Identities=21% Similarity=0.540 Sum_probs=14.6 Q ss_pred EECCCCCCEEEECCCCCCC-CCCCCCC Q ss_conf 9988888213654676844-4688002 Q gi|254780167|r 49 KHCPYCSTLYHFDSSLDSK-ETLPVGC 74 (78) Q Consensus 49 v~C~YC~~~fv~~~~l~~~-es~P~~c 74 (78) -.|..|+ |+|++..... +..||+- T Consensus 4 y~C~~Cg--yiYdp~~Gd~~~gi~pGT 28 (54) T 4rxn_A 4 YTCTVCG--YIYDPEDGDPDDGVNPGT 28 (54) T ss_dssp EEETTTC--CEECTTTCBGGGTBCTTC T ss_pred EECCCCC--CEECCCCCCCCCCCCCCC T ss_conf 5939999--087755488456879899 No 118 >2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=22.37 E-value=8.4 Score=18.65 Aligned_cols=20 Identities=25% Similarity=0.537 Sum_probs=16.7 Q ss_pred CCEEECCCCCCEEEECCCCC Q ss_conf 98899888882136546768 Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~ 65 (78) +++-.|..|++.|.....|. T Consensus 10 EKpy~C~~Cgk~F~~~s~L~ 29 (46) T 2emg_A 10 ENPFICSECGKVFTHKTNLI 29 (46) T ss_dssp CCSCBCTTTCCBCSSHHHHH T ss_pred CCCEECCCCCCCCCCHHHHH T ss_conf 98938999989738778889 No 119 >2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Probab=22.27 E-value=16 Score=17.11 Aligned_cols=22 Identities=23% Similarity=0.481 Sum_probs=17.8 Q ss_pred CCCEEECCCCCCEEEECCCCCC Q ss_conf 9988998888821365467684 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78) .+++-.|.-|++.|...+.|.. T Consensus 9 Gekpy~C~~Cgk~F~~~s~L~~ 30 (46) T 2em9_A 9 GEKPYNCKECGKSFRWASCLLK 30 (46) T ss_dssp CCCSEECSSSCCEESSHHHHHH T ss_pred CCCCEECCCCCCEECCHHHHHH T ss_conf 9889678987997088899999 No 120 >2vm5_A Baculoviral IAP repeat-containing protein 1; baculoviral inhibitor of apoptosis repeat-containing 1, BIR2, BIRC1, apoptosis, polymorphism; 1.80A {Homo sapiens} Probab=22.24 E-value=43 Score=14.76 Aligned_cols=20 Identities=20% Similarity=0.521 Sum_probs=15.4 Q ss_pred EEECCCCCEEECCCCCCEEE Q ss_conf 99959998899888882136 Q gi|254780167|r 40 FINMGEENEKHCPYCSTLYH 59 (78) Q Consensus 40 ~l~l~~~~~v~C~YC~~~fv 59 (78) |+-.|.+..+.|-||+.... T Consensus 48 Fyytg~~D~v~Cf~C~~~l~ 67 (106) T 2vm5_A 48 FVFTGKQDTVQCFSCGGCLG 67 (106) T ss_dssp EEECSSTTCEEETTTCCEEE T ss_pred CEECCCCCCEEECCCCCEEC T ss_conf 47889997169531698914 No 121 >2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, electron transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa} Probab=22.07 E-value=28 Score=15.77 Aligned_cols=25 Identities=28% Similarity=0.743 Sum_probs=14.6 Q ss_pred EEECCCCCCEEEECCCCCC-CCCCCCCC Q ss_conf 8998888821365467684-44688002 Q gi|254780167|r 48 EKHCPYCSTLYHFDSSLDS-KETLPVGC 74 (78) Q Consensus 48 ~v~C~YC~~~fv~~~~l~~-~es~P~~c 74 (78) .-.|..|+ |+|++.... .+..||+- T Consensus 3 ~y~C~~Cg--yiYd~~~Gd~~~~i~pGT 28 (55) T 2v3b_B 3 KWQCVVCG--FIYDEALGLPEEGIPAGT 28 (55) T ss_dssp EEEETTTC--CEEETTTCBTTTTBCTTC T ss_pred CEECCCCC--EEECCCCCCCCCCCCCCC T ss_conf 76929999--188855588456869899 No 122 >2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=21.99 E-value=9.3 Score=18.41 Aligned_cols=16 Identities=31% Similarity=0.754 Sum_probs=10.1 Q ss_pred CCCCCEEECCCCCCEE Q ss_conf 5999889988888213 Q gi|254780167|r 43 MGEENEKHCPYCSTLY 58 (78) Q Consensus 43 l~~~~~v~C~YC~~~f 58 (78) +.+.+...|++|++.| T Consensus 19 ~~~~~~~~C~~C~k~~ 34 (98) T 2gqj_A 19 IHERGEAVCPTCNVVT 34 (98) T ss_dssp TTTTSCCCCTTTCCCC T ss_pred HCCCCCEECCCCCEEE T ss_conf 3389898999999730 No 123 >2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=21.90 E-value=8.5 Score=18.62 Aligned_cols=21 Identities=24% Similarity=0.531 Sum_probs=17.1 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|..|++.|...+.|. T Consensus 9 GeKpy~C~~Cgk~F~~~s~L~ 29 (46) T 2eoe_A 9 GEKPYKCNECGKVFTQNSHLA 29 (46) T ss_dssp CCCSSEETTTTEECSSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 997938899999968889999 No 124 >2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=21.65 E-value=7 Score=19.09 Aligned_cols=22 Identities=27% Similarity=0.487 Sum_probs=17.3 Q ss_pred CCCEEECCCCCCEEEECCCCCC Q ss_conf 9988998888821365467684 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLDS 66 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~~ 66 (78) .+.+-.|..|++.|.+...|+. T Consensus 9 GEkpy~C~~Cgk~F~~~s~L~~ 30 (46) T 2yth_A 9 GEKPFQCEECGKRFTQNSHLHS 30 (46) T ss_dssp CSSSBCCSSSCCCBSSHHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHHH T ss_conf 9889699999899788899999 No 125 >3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} Probab=21.45 E-value=30 Score=15.64 Aligned_cols=15 Identities=20% Similarity=0.505 Sum_probs=11.7 Q ss_pred CCEEECCCCCCEEEE Q ss_conf 988998888821365 Q gi|254780167|r 46 ENEKHCPYCSTLYHF 60 (78) Q Consensus 46 ~~~v~C~YC~~~fv~ 60 (78) ...+.|||||-.|.- T Consensus 276 ~~~v~Cp~cgA~y~~ 290 (320) T 3mkr_B 276 KPVEKCPLSGACYSP 290 (320) T ss_dssp SCCEECTTTCCEECG T ss_pred CCCCCCCCCCCEECH T ss_conf 997045897886257 No 126 >2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=21.35 E-value=17 Score=17.01 Aligned_cols=21 Identities=14% Similarity=0.327 Sum_probs=17.4 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+++-.|.-|++.|.....|. T Consensus 9 geKPy~C~~CgK~F~~~s~L~ 29 (44) T 2eox_A 9 DSKSYNCNECGKAFTRIFHLT 29 (44) T ss_dssp CCCCEEETTTTEEESSSHHHH T ss_pred CCCCEECCCCCCEECCHHHHH T ss_conf 984948989888408648899 No 127 >2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=21.25 E-value=7.8 Score=18.85 Aligned_cols=21 Identities=19% Similarity=0.317 Sum_probs=16.9 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|..|++.|.....|+ T Consensus 9 gekpy~C~~C~k~F~~~~~l~ 29 (46) T 2eq4_A 9 GEKLYNCKECGKSFSRAPCLL 29 (46) T ss_dssp CCCCCCBTTTTBCCSCHHHHH T ss_pred CCCCCCCCCCCCCCCCHHHHH T ss_conf 968828998898968678999 No 128 >2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=21.16 E-value=27 Score=15.90 Aligned_cols=14 Identities=14% Similarity=0.330 Sum_probs=7.5 Q ss_pred CEEECCCCCCEEEE Q ss_conf 88998888821365 Q gi|254780167|r 47 NEKHCPYCSTLYHF 60 (78) Q Consensus 47 ~~v~C~YC~~~fv~ 60 (78) ..+.|+||+..|.. T Consensus 42 ~~~~C~~C~~~~~r 55 (75) T 2d9k_A 42 RTELCGNCGRNVLV 55 (75) T ss_dssp CEEECSSSCCEEET T ss_pred CCEECCCCCEECCH T ss_conf 77748986928528 No 129 >2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=21.11 E-value=15 Score=17.23 Aligned_cols=19 Identities=21% Similarity=0.585 Sum_probs=15.5 Q ss_pred CEEECCCCCCEEEECCCCC Q ss_conf 8899888882136546768 Q gi|254780167|r 47 NEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 47 ~~v~C~YC~~~fv~~~~l~ 65 (78) .--.|..|++.|.....|. T Consensus 11 ~~YkC~~CgK~F~~~s~L~ 29 (46) T 2em5_A 11 KSHQCHECGRGFTLKSHLN 29 (46) T ss_dssp CSEECSSSCCEESSHHHHH T ss_pred CCEECCCCCCCCCCHHHHH T ss_conf 6268897988888857856 No 130 >2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=20.90 E-value=11 Score=17.94 Aligned_cols=21 Identities=19% Similarity=0.537 Sum_probs=17.5 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|..|++.|...+.|+ T Consensus 9 geKpy~C~~Cgk~F~~~s~l~ 29 (46) T 2eoz_A 9 GEKPYSCNVCGKAFVLSAHLN 29 (46) T ss_dssp SCCSEEETTTTEEESSHHHHH T ss_pred CCCCCCCCCCCCCCCCHHHHH T ss_conf 978818998997748889999 No 131 >1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A 1rwd_A 1qcv_A 2pve_A 2pvx_A ... Probab=20.83 E-value=34 Score=15.37 Aligned_cols=25 Identities=20% Similarity=0.525 Sum_probs=14.6 Q ss_pred EECCCCCCEEEECCCCC-CCCCCCCCCE Q ss_conf 99888882136546768-4446880024 Q gi|254780167|r 49 KHCPYCSTLYHFDSSLD-SKETLPVGCL 75 (78) Q Consensus 49 v~C~YC~~~fv~~~~l~-~~es~P~~c~ 75 (78) -.|.-|+ |+|++... +.+..||+-. T Consensus 3 y~C~~Cg--yiYdp~~Gd~~~~i~pGT~ 28 (52) T 1yk4_A 3 LSCKICG--YIYDEDEGDPDNGISPGTK 28 (52) T ss_dssp EEESSSS--CEEETTTCBGGGTBCTTCC T ss_pred CCCCCCC--EEECCCCCCCCCCCCCCCC T ss_conf 4869999--3888766884668699999 No 132 >2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=20.82 E-value=9.7 Score=18.31 Aligned_cols=21 Identities=29% Similarity=0.613 Sum_probs=17.0 Q ss_pred CCCEEECCCCCCEEEECCCCC Q ss_conf 998899888882136546768 Q gi|254780167|r 45 EENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 45 ~~~~v~C~YC~~~fv~~~~l~ 65 (78) .+.+-.|..|++.|...+.|. T Consensus 9 GEKpy~C~~CgK~F~~~s~L~ 29 (46) T 2eop_A 9 GEKPHECRECGKSFSFNSQLI 29 (46) T ss_dssp CCCSCBCTTTCCBCSSHHHHH T ss_pred CCCCEECCCCCCCCCCHHHHH T ss_conf 997918899989987568876 No 133 >1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Probab=20.61 E-value=15 Score=17.33 Aligned_cols=19 Identities=32% Similarity=0.496 Sum_probs=10.0 Q ss_pred CCEEECCCCCCEEEECCCC Q ss_conf 9889988888213654676 Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSL 64 (78) Q Consensus 46 ~~~v~C~YC~~~fv~~~~l 64 (78) +.+-.|.+|+..|.....| T Consensus 35 ~kpy~C~~C~~~f~~~~~L 53 (70) T 1x5w_A 35 DRPFKCNYCSFDTKQPSNL 53 (70) T ss_dssp SCSEECSSSSCEESSHHHH T ss_pred CCCEECCCCCCEECCHHHH T ss_conf 9782789778874888899 No 134 >3hl5_A Baculoviral IAP repeat-containing protein 4; BIR, apoptosis, small molecule drug discovery, structure-based drug design, cytoplasm, ligase; HET: 9JZ; 1.80A {Homo sapiens} PDB: 1nw9_A 2vsl_A Probab=20.44 E-value=45 Score=14.66 Aligned_cols=20 Identities=25% Similarity=0.536 Sum_probs=14.9 Q ss_pred EEECCCCCEEECCCCCCEEE Q ss_conf 99959998899888882136 Q gi|254780167|r 40 FINMGEENEKHCPYCSTLYH 59 (78) Q Consensus 40 ~l~l~~~~~v~C~YC~~~fv 59 (78) |+-.+....+.|-||+.... T Consensus 38 Fyytg~~D~v~Cf~C~~~l~ 57 (95) T 3hl5_A 38 FYALGEGDKVKCFHCGGGLT 57 (95) T ss_dssp EEECSSTTCEEETTTCCEEC T ss_pred CEECCCCCEEEECCCCCCCC T ss_conf 87879898789585688925 No 135 >2vy4_A U11/U12 small nuclear ribonucleoprotein 48 kDa protein; splicing, mRNA processing, alternative splicing, transcription, nucleus, spliceosome; NMR {Homo sapiens} SCOP: g.37.1.7 PDB: 2vy5_A Probab=20.27 E-value=37 Score=15.11 Aligned_cols=22 Identities=36% Similarity=0.461 Sum_probs=15.7 Q ss_pred CCCCEEECCCCCCEEEECCCCC Q ss_conf 9998899888882136546768 Q gi|254780167|r 44 GEENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 44 ~~~~~v~C~YC~~~fv~~~~l~ 65 (78) ++++.++|||=+-.-+-+++|. T Consensus 1 ~~~e~v~CPyd~nHrmPksSLe 22 (37) T 2vy4_A 1 GSDEVVICPYDSNHHMPKSSLA 22 (37) T ss_dssp CCCCCEECTTTSSCEECGGGHH T ss_pred CCCCEEECCCCCCCCCCHHHHH T ss_conf 9885685776566747678899 No 136 >2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=20.21 E-value=15 Score=17.23 Aligned_cols=17 Identities=18% Similarity=0.548 Sum_probs=10.9 Q ss_pred EEECCCCCCEEEECCCC Q ss_conf 89988888213654676 Q gi|254780167|r 48 EKHCPYCSTLYHFDSSL 64 (78) Q Consensus 48 ~v~C~YC~~~fv~~~~l 64 (78) .-.|.+|++.|.....| T Consensus 38 ~~~C~~C~~~f~~~~~L 54 (78) T 2d9h_A 38 RFPCEFCGKRFEKPDSV 54 (78) T ss_dssp CEECTTTCCEESSHHHH T ss_pred CEECCCCCCEECCHHHH T ss_conf 54639979940799999 No 137 >2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=20.14 E-value=11 Score=18.12 Aligned_cols=20 Identities=25% Similarity=0.476 Sum_probs=16.7 Q ss_pred CCEEECCCCCCEEEECCCCC Q ss_conf 98899888882136546768 Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~ 65 (78) +++-.|..|++.|.....|. T Consensus 10 eKPy~C~~C~K~F~~~s~L~ 29 (46) T 2em6_A 10 EKCYKCDVCGKEFSQSSHLQ 29 (46) T ss_dssp CCCCBCSSSCCBCSSHHHHH T ss_pred CCCEECCCCCCEECCHHHHH T ss_conf 88938998887305778988 No 138 >2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Probab=20.10 E-value=8.6 Score=18.59 Aligned_cols=20 Identities=25% Similarity=0.469 Sum_probs=16.3 Q ss_pred CCEEECCCCCCEEEECCCCC Q ss_conf 98899888882136546768 Q gi|254780167|r 46 ENEKHCPYCSTLYHFDSSLD 65 (78) Q Consensus 46 ~~~v~C~YC~~~fv~~~~l~ 65 (78) +.+-.|..|++.|...+.|. T Consensus 10 EKpy~C~~CgK~F~~~s~L~ 29 (46) T 2ep1_A 10 EKPYECSDCGKSFIKKSQLH 29 (46) T ss_dssp CCSSCCSSSCCCCSSHHHHH T ss_pred CCCEECCCCCCCCCCHHHHH T ss_conf 98968999999628789999 Done!