HHsearch alignment for GI: 254780168 and conserved domain: COG0665
>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].
Probab=98.69 E-value=4e-06 Score=60.48 Aligned_cols=155 Identities=22% Similarity=0.251 Sum_probs=75.1
Q ss_pred CEECCHHHHHHHHHHHHHCCCEEEEEECCCCCC-CC---CCEEEECHHH-------HHHH--HHCCCHHHHHHCC-----
Q ss_conf 387753899999999997798599995687655-57---7136678889-------9999--9889947898626-----
Q gi|254780168|r 1 MIIGAGISGLTLAASLGHRGIQSCVLEKKDQLS-DS---GFGIQISPNA-------SRIL--KRIGILDQLEDIW----- 62 (380)
Q Consensus 1 iIvGaG~aGl~~A~~L~~~G~~v~i~Er~~~~~-~~---g~gi~l~p~~-------~~~L--~~lGi~~~~~~~~----- 62 (380)
T Consensus 8 vIIGgGi~Gls~A~~La~~G~~V~vie~~~~~~g~s~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 86 (387)
T COG0665 8 VIIGGGIVGLSAAYYLAERGADVTVLEAGEAGGGAAGRNAGGI-LAPWASPGGELEVRPLADLSLALWRELSEELGTGAG 86 (387)
T ss_pred EEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHH-HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 9989869999999999976991999917988767667767777-524235553033433799999999998875376644
Q ss_pred CCC-CCEEEEECCCC------C-C---CCC-------CC---CCCCCC---CC--CCC----EEEEEECCHHHHHHHHHH
Q ss_conf 884-30699978854------4-3---334-------55---432344---44--782----478620001347889973
Q gi|254780168|r 63 IEP-EDFVFRSGSTL------K-E---LSR-------FS---CKNYSR---NN--WGG----IYGVVKRHTLQKILLNHI 112 (380)
Q Consensus 63 ~~~-~~~~~~~~~~~------~-~---~~~-------~~---~~~~~~---~~--~~~----~~~~i~r~~l~~~L~~~~ 112 (380)
T Consensus 87 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~ 166 (387)
T COG0665 87 LRRRGLLDLAAREGLKGLAQLERLAAELEAAGEDAELLDAAEAAELEPALGPDFVCGGLFDPTGGHLDPRLLTRALAAAA 166 (387)
T ss_pred EEEECEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCEECHHHHHHHHHHHH
T ss_conf 56624299884467432566899999998602100118887876637333776433459848883457899999999999
Q ss_pred HHCCCEEEEEEECCCCCCC----CC-CCCCCCEEEEEEEEECCCCCCCH
Q ss_conf 2068725642101234432----11-23453103568997436766312
Q gi|254780168|r 113 QTQPLARLHLSTHITHPDC----TQ-ISKINNQKPDLLVGADGLNSNIR 156 (380)
Q Consensus 113 ~~~~~~~~~~~~~v~~~~~----~~-~~~~~~~~adlvIgADG~~S~vR 156 (380)
T Consensus 167 ~~~G~~~~~~~~~v~~~~~~~~~~~v~t~~g~~~a~~vv~a~G~~~~~l 215 (387)
T COG0665 167 EELGVVIIEGGTPVTSLERDGRVVGVETDGGTIEADKVVLAAGAWAGEL 215 (387)
T ss_pred HHCCCCEEECCCCEEEEEECCCEEEEEECCCEEECCEEEECCCCCHHHH
T ss_conf 9739918972352467761473589995897098198999999643555