HHsearch alignment for GI: 254780168 and conserved domain: PRK08849
>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional.
Probab=100.00 E-value=0 Score=361.45 Aligned_cols=353 Identities=20% Similarity=0.227 Sum_probs=251.5
Q ss_pred CEECCHHHHHHHHHHHHHCCCEEEEEECC-CCCCC-----CCCEEEECHHHHHHHHHCCCHHHHHHCCC-CCCCEEEEEC
Q ss_conf 38775389999999999779859999568-76555-----77136678889999998899478986268-8430699978
Q gi|254780168|r 1 MIIGAGISGLTLAASLGHRGIQSCVLEKK-DQLSD-----SGFGIQISPNASRILKRIGILDQLEDIWI-EPEDFVFRSG 73 (380)
Q Consensus 1 iIvGaG~aGl~~A~~L~~~G~~v~i~Er~-~~~~~-----~g~gi~l~p~~~~~L~~lGi~~~~~~~~~-~~~~~~~~~~ 73 (380)
T Consensus 7 ~IvGaG~vGl~lAl~La~~G~~V~iiE~~~p~~~~~~~~~~~R~~al~~~s~~~L~~lG~~~~i~~~~~~~~~~~~~~~~ 86 (384)
T PRK08849 7 AVVGGGMVGAATAIGFAKQGRSVAVIEGFEPKAFEASQPMDIRVSAISQNSVDLLESLGAWSSIVAMRVCPYKRLETWEH 86 (384)
T ss_pred EEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECC
T ss_conf 99992499999999999579959999689987666667877056786799999999879864687614786002553017
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCCC------CCCCCCCCCCEEEEEEEE
Q ss_conf 85443334554323444478247862000134788997320687256421012344------321123453103568997
Q gi|254780168|r 74 STLKELSRFSCKNYSRNNWGGIYGVVKRHTLQKILLNHIQTQPLARLHLSTHITHP------DCTQISKINNQKPDLLVG 147 (380)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~~~~~~~~~~v~~~------~~~~~~~~~~~~adlvIg 147 (380)
T Consensus 87 ~--~~~~~f~~~~~~~~~l---g~iv~~~~l~~~L~~~~~~~~~i~~~~~~~v~~~~~~~~~~~v~l~~g~~i~a~llIg 161 (384)
T PRK08849 87 P--ECRTRFHSDELNLDQL---GYIVENRLIQLGLWQQFAQYPNLTLLCPEKLKDLEFSAEGNRVTLESGAEIEAKWVIG 161 (384)
T ss_pred C--CCCCCCCHHHCCCCCC---CCHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECCCEEEEEECCCCEEEEEEEEE
T ss_conf 7--6441248534386300---0034379999999999984899199838778898853881499978999998547999
Q ss_pred ECCCCCCCHHHCCCCCCCC-CCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCCCCC
Q ss_conf 4367663121128533443-110157860365446554566760899765405788840489737999984577421112
Q gi|254780168|r 148 ADGLNSNIRHYIDTQPITF-SGDVVLRCLIPQNNAPEFIDFQSVNIFFGPDSHLVTYPLREDNTINMVFVSSKHTLKDIS 226 (380)
Q Consensus 148 ADG~~S~vR~~l~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 226 (380)
T Consensus 162 ADG~~S~vR~~~gi~~~~~~y~q~~~v~~v~~~----~~~~~~a~q~f~~~gp~a~lPl~~~-~~s~vw~~~~~~~~~~~ 236 (384)
T PRK08849 162 ADGANSQVRQLAGIGITAWDYRQHCMLINVETE----QPQQDITWQQFTPSGPRSFLPLQGN-QGSLVWYDSPKRIKQLS 236 (384)
T ss_pred EECCCHHHHHHCCCCEECCCCCEEEEEEEEECC----CCCCCCEEEEECCCCCEEEEECCCC-CEEEEEECCHHHHHHHH
T ss_conf 207864667733885450477458999998526----8877750899849997279862799-66899965877798754
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEECHHHCCCCCCCHHHHHCCCHHHHHHH
Q ss_conf 34553222389898632128022201100233210123346542101468711211111244830334201303679999
Q gi|254780168|r 227 FLKRSEIHKEWFVKHLTNWHQEIIQLILQINDTHLYPLFECECKHWHNKKNAVLIGDAAHTLLPFAAQGANMAIEDAYAL 306 (380)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~rv~LiGDAAH~~~P~~GqG~n~al~Da~~L 306 (380)
T Consensus 237 ~~-----~~~~~~~~l~~~~~~~l~~~~-~~~~~~~pl~~~-~a~~~~~~rv~LiGDAAH~~~P~aGQG~N~gi~Da~~L 309 (384)
T PRK08849 237 AM-----SPEQLRSEILRHFPAELGEFK-VLQFGSFPLTRR-HAQQYVKNNCVLLGDAAHTINPLAGQGVNLGFKDVDVL 309 (384)
T ss_pred CC-----CHHHHHHHHHHHHHHHCCCEE-EEEEECCHHHHH-HHHHHCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf 39-----989999999987303207569-998503355533-33552368889972523346972125240469999999
Q ss_pred HHHHCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHCCCHHHHHC
Q ss_conf 9985248--989999999998679999999999998898367898-999999999851533377720
Q gi|254780168|r 307 SYLLGKK--TIPAAISAYQKVRAVRVKRIRYRTKLNQLLFHMHRP-ASLFRNAGLRLGIHKPLHKSL 370 (380)
Q Consensus 307 a~~L~~~--~~~~~l~~Y~~~R~~~~~~i~~~s~~~~~~~~~~~~-~~~~r~~~l~~~~~~~~~~~l 370 (380)
T Consensus 310 ~~~l~~~~~~~~~~L~~Y~~~R~~~~~~~~~~~d~l~~~f~~~~~~~~~~R~~~l~~~~~~~~lk~~ 376 (384)
T PRK08849 310 LEETEKQGALNDAAFARYERRRRPDNLLMQTGMDLFYKTFSNDLTPLKLLRNAALKLAEHSGPLKTQ 376 (384)
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHH
T ss_conf 9999846887799999999999899999999999999997699579999999999998508899999