HHsearch alignment for GI: 254780168 and conserved domain: PRK12416
>PRK12416 protoporphyrinogen oxidase; Provisional.
Probab=98.11 E-value=6e-06 Score=59.27 Aligned_cols=60 Identities=20% Similarity=0.366 Sum_probs=45.9
Q ss_pred CEECCHHHHHHHHHHHHHC------CCEEEEEECCCCCC-------CCC-------CEE-EECHHHHHHHHHCCCHHHHH
Q ss_conf 3877538999999999977------98599995687655-------577-------136-67888999999889947898
Q gi|254780168|r 1 MIIGAGISGLTLAASLGHR------GIQSCVLEKKDQLS-------DSG-------FGI-QISPNASRILKRIGILDQLE 59 (380)
Q Consensus 1 iIvGaG~aGl~~A~~L~~~------G~~v~i~Er~~~~~-------~~g-------~gi-~l~p~~~~~L~~lGi~~~~~ 59 (380)
T Consensus 5 aVIGgGISGLsaA~~L~~~~~~~~~~~~vtl~Eas~r~GG~I~T~~~~g~~~E~GP~s~~~~~~~~~~L~~eLGL~d~li 84 (466)
T PRK12416 5 VVIGGGITGLSTMFYLEKLKKDYNIDLNLILVEKEEYLGGKIHSVEEKDFIMESGADSIVARNEHVMPLVKDLNLEEEMV 84 (466)
T ss_pred EEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEEECCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 99899789999999998725555899867999779988677989973999975598600348878999999869931144
Q ss_pred H
Q ss_conf 6
Q gi|254780168|r 60 D 60 (380)
Q Consensus 60 ~ 60 (380)
T Consensus 85 ~ 85 (466)
T PRK12416 85 Y 85 (466)
T ss_pred C
T ss_conf 6