HHsearch alignment for GI: 254780168 and conserved domain: TIGR01789
>TIGR01789 lycopene_cycl lycopene cyclase; InterPro: IPR008461 This family consists of several bacterial Lycopene cyclase (CrtY) proteins. Lycopene cyclase is a key enzyme which converts the acyclic carotenoid lycopene into the cyclic carotenoid beta-carotene .; GO: 0045436 lycopene beta cyclase activity, 0016117 carotenoid biosynthetic process.
Probab=99.09 E-value=2.8e-09 Score=82.17 Aligned_cols=301 Identities=16% Similarity=0.256 Sum_probs=159.1
Q ss_pred CEECCHHHHHHHHHHHHHC--CCEEEEEECCCCCCC-C---CCEEEECHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECC
Q ss_conf 3877538999999999977--985999956876555-7---713667888999999889947898626884306999788
Q gi|254780168|r 1 MIIGAGISGLTLAASLGHR--GIQSCVLEKKDQLSD-S---GFGIQISPNASRILKRIGILDQLEDIWIEPEDFVFRSGS 74 (380)
Q Consensus 1 iIvGaG~aGl~~A~~L~~~--G~~v~i~Er~~~~~~-~---g~gi~l~p~~~~~L~~lGi~~~~~~~~~~~~~~~~~~~~ 74 (380)
T Consensus 3 i~vGgGLAggLIALrL~~arPd~Ri~~IEa~~~igGNHtWSffd~Dls~~qhawla----------------~lv~~~Wp 66 (392)
T TIGR01789 3 IVVGGGLAGGLIALRLQDARPDLRILVIEAAASIGGNHTWSFFDADLSDAQHAWLA----------------DLVVYDWP 66 (392)
T ss_pred EEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHH----------------HHCCCCCC
T ss_conf 88727335789999875259872899984377668875301003666743577765----------------34013288
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEECC--CCCCCCCCC-----CCCCEEEEEEEE
Q ss_conf 5443334554323444478247862000134788997320687256421012--344321123-----453103568997
Q gi|254780168|r 75 TLKELSRFSCKNYSRNNWGGIYGVVKRHTLQKILLNHIQTQPLARLHLSTHI--THPDCTQIS-----KINNQKPDLLVG 147 (380)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~~~~~~~~~~v--~~~~~~~~~-----~~~~~~adlvIg 147 (380)
T Consensus 67 gGYeV-RFp~~---rrkL~taY~S~tStrf~e~l~q~fpe~s~~---~~r~a~~~~Ad~V~L~PsqyG~g~~i~A~~VID 139 (392)
T TIGR01789 67 GGYEV-RFPKR---RRKLKTAYLSMTSTRFREELEQKFPERSVL---LDRKAVEVDADAVDLEPSQYGNGRVIRARAVID 139 (392)
T ss_pred CCCEE-CCHHH---HHHHHCCCCCCHHHHHHHHHHHHCCCCEEE---ECCEEEEEEECEEEECCCCCCCCCEEEEEEEEE
T ss_conf 97133-35555---433210221100177899999876872056---401567766075662654468962676402772
Q ss_pred ECCCCCCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEE-EEEECCCCEEEEEEEECCCC----C
Q ss_conf 436766312112853344311015786036544655456676089976540578-88404897379999845774----2
Q gi|254780168|r 148 ADGLNSNIRHYIDTQPITFSGDVVLRCLIPQNNAPEFIDFQSVNIFFGPDSHLV-TYPLREDNTINMVFVSSKHT----L 222 (380)
Q Consensus 148 ADG~~S~vR~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~----~ 222 (380)
T Consensus 140 ~Rg~~P~~--~L~~GfQ~FlG~e-~R-----L~~PHGl~~PiiM-----DATVdQ~~PhGnGGgYRFVY~LPL~~~~llI 206 (392)
T TIGR01789 140 ARGFKPSA--ALKVGFQVFLGRE-VR-----LAEPHGLESPIIM-----DATVDQSDPHGNGGGYRFVYVLPLDAQELLI 206 (392)
T ss_pred CCCCCCCC--CCCCCHHHHHCCC-HH-----CCCCCCCCCCEEE-----CCCHHHCCCCCCCCCEEEEEECCCCCCEEEE
T ss_conf 58887772--1025323442320-00-----1578888887042-----5624211778798740278864798750136
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCC----CCCCEEEECCCCCCCCCCCC-CCCCCCCCC---CCEEECHHHCCCCCCCHHH
Q ss_conf 111234553222389898632128----02220110023321012334-654210146---8711211111244830334
Q gi|254780168|r 223 KDISFLKRSEIHKEWFVKHLTNWH----QEIIQLILQINDTHLYPLFE-CECKHWHNK---KNAVLIGDAAHTLLPFAAQ 294 (380)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~l~~-~~~~~~~~~---~rv~LiGDAAH~~~P~~Gq 294 (380)
T Consensus 207 EDTyY~D~~~L~~~~l~qrI~~YA~a~gW~~~t~~r~--EqGvLPv~l~GD~sa~~~~~~~PG~a~~Glragl~HP~TgY 284 (392)
T TIGR01789 207 EDTYYADDAELDEEALRQRIDDYALAKGWQLATLVRE--EQGVLPVLLAGDSSAYVDKVDIPGLAIAGLRAGLVHPTTGY 284 (392)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH--HCCCCCEEECCCCHHCCCCCCCCCCCHHHHHHCCCCCCCCC
T ss_conf 6300058883878988547899986428610126765--35866230158730112477889740135530244774135
Q ss_pred HHCCCHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 20130367999999852------4898999999999867999999999999
Q gi|254780168|r 295 GANMAIEDAYALSYLLG------KKTIPAAISAYQKVRAVRVKRIRYRTKL 339 (380)
Q Consensus 295 G~n~al~Da~~La~~L~------~~~~~~~l~~Y~~~R~~~~~~i~~~s~~ 339 (380)
T Consensus 285 slp~AV~~Ad~l~a~~aqrG~lss~~~~~~id~~ar~~W~~~gyyR~LnRm 335 (392)
T TIGR01789 285 SLPVAVEVADALAARDAQRGALSSEDLREAIDSYARERWRKRGYYRLLNRM 335 (392)
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 578999999998520100455677899999876555411015507788889