HHsearch alignment for GI: 254780168 and conserved domain: TIGR01811
>TIGR01811 sdhA_Bsu succinate dehydrogenase or fumarate reductase, flavoprotein subunit; InterPro: IPR011280 This entry represents the succinate dehydrogenase flavoprotein subunit as found in the low-GC Gram-positive bacteria and a few other lineages. This enzyme may act in a complete or partial TCA cycle, or act in the opposite direction as fumarate reductase. In some but not all species, succinate dehydrogenase and fumarate reductase may be encoded as separate isozymes..
Probab=96.37 E-value=0.0041 Score=39.88 Aligned_cols=33 Identities=24% Similarity=0.458 Sum_probs=29.1
Q ss_pred CEECCHHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf 387753899999999997798599995687655
Q gi|254780168|r 1 MIIGAGISGLTLAASLGHRGIQSCVLEKKDQLS 33 (380)
Q Consensus 1 iIvGaG~aGl~~A~~L~~~G~~v~i~Er~~~~~ 33 (380)
T Consensus 2 iVVGtGLaG~~A~~~lae~G~~V~~F~~~d~pr 34 (620)
T TIGR01811 2 IVVGTGLAGGSAAAKLAELGYHVKLFSYQDAPR 34 (620)
T ss_pred EEECCCHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf 685565347899999986488512544058876