HHsearch alignment for GI: 254780170 and conserved domain: COG1464
>COG1464 NlpA ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].
Probab=97.01 E-value=0.0098 Score=37.63 Aligned_cols=228 Identities=16% Similarity=0.187 Sum_probs=115.8
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCC-CCEEE
Q ss_conf 91389999999999998401244216899985794999871789883068898988015099999999996798-22025
Q gi|254780170|r 1 MYKDFFVSILCLIILFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDD-PSKIQ 79 (342)
Q Consensus 1 M~K~~l~~~l~l~~~~~~~~aa~a~tLd~Vk~rG~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~raiAaal~gd-~~kVe 79 (342)
T Consensus 1 m~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~I~vg~~~~p---------------~a~ile~~~k~~~~k~Gi~l~ 60 (268)
T COG1464 1 MKKLKKLALALVALLALAACGAAAAKAT-----KTIKVGATPGP---------------HAEILEVVVKPALKKKGLDLK 60 (268)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCC-----CCEEEEECCCC---------------HHHHHHHHHHHHHHHCCCEEE
T ss_conf 9438899999999999975223113457-----71799636896---------------599999998778885596599
Q ss_pred EEEC-CCCCCHHHHHCCCEEEEEECCCCCCCCHHC-CCCCCCC--CCCCCCEEEEEECCCCCCCHHHHC-CCCEEEEECC
Q ss_conf 9981-431002677439627998124325320110-2784353--223440234630211347536417-8620343134
Q gi|254780170|r 80 YLPL-NAKERFLALQSKQIDILSRNTDWTLLREIS-LGLAFRP--ITYFDGQGFIMHKKKGISSVSQLS-GASICVQAGT 154 (342)
Q Consensus 80 ~v~~-~~~~rf~aL~sG~vDil~~~~T~T~~Rd~~-~~v~Fs~--~~~~dgq~~lVrk~~~i~s~~dL~-G~~I~v~~GT 154 (342)
T Consensus 61 i~~FtDY~~PN~AL~~gdiDaN~FQH~pyL~~~~k~~~~~Lv~vg~~~i~Pmg~Y---Skk~ksl~el~~GatIaiPNDp 137 (268)
T COG1464 61 IVEFTDYVQPNEALADGDIDANAFQHKPYLDQFNKEHGGKLVAVGNTHIEPMGLY---SKKYKSLAELKDGATIAIPNDP 137 (268)
T ss_pred EEEECCCCCHHHHHHCCCCCCHHHHCHHHHHHHHHHCCCCEEEEEEEEECCCEEC---CHHCCCHHHCCCCCEEECCCCC
T ss_conf 9981487665578766884600121468899999973997898755776142501---2200868467999989887898
Q ss_pred CHHHHHHHHHHHCCC-C--------------------CCEEEECCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCHH
Q ss_conf 269999999986299-8--------------------5078747989999998739602998250479999983678001
Q gi|254780170|r 155 TTELTLADYFKAHNM-K--------------------YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE 213 (342)
Q Consensus 155 T~e~~l~~~~~~~~~-~--------------------~~~v~~~~~~~a~~al~~Gr~DA~~~D~s~La~~~~~~~~p~~ 213 (342)
T Consensus 138 sN~gRAL~lL~~aGLIkLk~~~~~~aT~~DI~eNPK~lki~El-dAaqlpRaLdd--vD~AvIN~n--yA~~AgL-~p~k 211 (268)
T COG1464 138 TNEGRALLLLQKAGLIKLKDGVNLLATPKDITENPKNLKIKEL-EAAQLPRALDD--VDAAVINTN--YALQAGL-NPKK 211 (268)
T ss_pred CCHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHCCCCCEEEEC-CHHHCCCCCCC--CCEEEECCH--HHHHCCC-CCCC
T ss_conf 7356799999987967976887655888788619445756870-56756532035--677987430--7977599-9120
Q ss_pred HCCCCCCCCCCCEE--EECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHC
Q ss_conf 00256444237101--000277757999988774433112123301520898862267177887623
Q gi|254780170|r 214 HVILPDIISKSPLA--PAIIQGDTEWYNIVSWTHYAMVTAEELGITQKNINQVSKDTTNPDVQRFLG 278 (342)
Q Consensus 214 ~~il~e~iskEPlg--~avr~gD~~w~d~V~W~~~ali~Aee~git~~nv~~~~~~s~~p~i~r~lg 278 (342)
T Consensus 212 dai~~e~~~~spY~Niivvr~~d~d---------------------~~~ik~lv~a~qs~evk~~i~ 257 (268)
T COG1464 212 DALFEEDKDSSPYVNIIVVREEDKD---------------------DPAVKKLVEAYQSDEVKAFIE 257 (268)
T ss_pred CCEECCCCCCCCCEEEEEECCCCCC---------------------CHHHHHHHHHHCCHHHHHHHH
T ss_conf 4214146667862479997155668---------------------889999999974999999999