HHsearch alignment for GI: 254780170 and conserved domain: COG1732
>COG1732 OpuBC Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) [Cell envelope biogenesis, outer membrane].
Probab=96.22 E-value=0.074 Score=32.05 Aligned_cols=198 Identities=17% Similarity=0.183 Sum_probs=107.8
Q ss_pred HCCEEEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHCC-CCCEEEEEECCCCC--CHHHHHCCCEEEEEEC--CC-
Q ss_conf 579499987178988306889898801509999999999679-82202599814310--0267743962799812--43-
Q gi|254780170|r 32 KRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFD-DPSKIQYLPLNAKE--RFLALQSKQIDILSRN--TD- 105 (342)
Q Consensus 32 ~rG~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~raiAaal~g-d~~kVe~v~~~~~~--rf~aL~sG~vDil~~~--~T- 105 (342)
T Consensus 31 ~~~~I~VgsK~~tE--------~~-------IL~~m~~~lle~~~~kv~~~~~lG~t~v~~~Al~~G~IDiYpEYTGt~~ 95 (300)
T COG1732 31 AAKTIVVGSKIFTE--------QY-------ILGNILKQLLEKNGIKVEDKTGLGGTAVVRNALKSGDIDIYPEYTGTAL 95 (300)
T ss_pred CCCCEEEECCCCCH--------HH-------HHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCCCEEEEECCHHH
T ss_conf 57887983477838--------89-------9999999999865991454168885299999997598776854323145
Q ss_pred CCCCC-------H-------------HCCCCCCCCCC-CCCCEEEEEECC----CCCCCHHHHCCCCEEEEECCCHHH--
Q ss_conf 25320-------1-------------10278435322-344023463021----134753641786203431342699--
Q gi|254780170|r 106 WTLLR-------E-------------ISLGLAFRPIT-YFDGQGFIMHKK----KGISSVSQLSGASICVQAGTTTEL-- 158 (342)
Q Consensus 106 ~T~~R-------d-------------~~~~v~Fs~~~-~~dgq~~lVrk~----~~i~s~~dL~G~~I~v~~GTT~e~-- 158 (342)
T Consensus 96 ~~~lk~~~~~~~dp~~~y~~vK~~~~k~~~l~wl~p~~~nNTyA~av~~~~A~~~~i~TiSDLak~~~~l~~g~~~eF~~ 175 (300)
T COG1732 96 FSFLKKDPPASKDPKKVYETVKKLDAKQFKLVWLKPAGFNNTYALAVRKDVAEKYNLETISDLAKHSNQLKLGADSEFAE 175 (300)
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEECHHHHHHHCCCCHHHHHHHHHHCEECCCHHHHC
T ss_conf 66345676454798999999999888607978965468776058996198898819816999998665346227842313
Q ss_pred ---HHHHHHHHCCCCCCE-EEECCHHHHHHHHHCCCEEE---EEECCHHHHHHHHHCCCCHHHCCCCCC-CCCCCE--EE
Q ss_conf ---999999862998507-87479899999987396029---982504799999836780010025644-423710--10
Q gi|254780170|r 159 ---TLADYFKAHNMKYHP-IVFERVEEIDAAYRAHRCDA---YTGDISALYALKLTNDRPSEHVILPDI-ISKSPL--AP 228 (342)
Q Consensus 159 ---~l~~~~~~~~~~~~~-v~~~~~~~a~~al~~Gr~DA---~~~D~s~La~~~~~~~~p~~~~il~e~-iskEPl--g~ 228 (342)
T Consensus 176 R~DG~~~l~k~Yg~~~~~~~~~m~~gl~y~Al~~g~~d~~~~YsTDg~-I~--------~~~L~VLkDDK~~fP~Y~~ap 246 (300)
T COG1732 176 RADGLPALQKAYGFDFKPDLRTMDGGLTYQALKNGTVDAADAYSTDGR-IA--------AYGLKVLKDDKGFFPPYQAAP 246 (300)
T ss_pred CCCCCHHHHHHHCCCCCCCCEECCCHHHHHHHHCCCCCEEEECCCCCC-CC--------CCCCEEEECCCCCCCCCCCCC
T ss_conf 651228999984876688744338158999987499776763145522-12--------268579706876799876564
Q ss_pred ECCCC----CHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00277----757999988774433112123
Q gi|254780170|r 229 AIIQG----DTEWYNIVSWTHYAMVTAEEL 254 (342)
Q Consensus 229 avr~g----D~~w~d~V~W~~~ali~Aee~ 254 (342)
T Consensus 247 vvre~vlk~~Pel~~~l~-~l~~kid~~tM 275 (300)
T COG1732 247 VVREEVLKKHPELKTILN-KLSGKIDTETM 275 (300)
T ss_pred EECHHHHHHCHHHHHHHH-HHHCCCCHHHH
T ss_conf 021877767988999998-87545899999