HHsearch alignment for GI: 254780170 and conserved domain: PRK09959
>PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional.
Probab=99.90 E-value=1.3e-21 Score=157.22 Aligned_cols=217 Identities=16% Similarity=0.082 Sum_probs=166.1
Q ss_pred HHHHCCEEEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEE-CCCCCCHHHHHCCCEEEEEECCCCC
Q ss_conf 998579499987178988306889898801509999999999679822025998-1431002677439627998124325
Q gi|254780170|r 29 DIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLP-LNAKERFLALQSKQIDILSRNTDWT 107 (342)
Q Consensus 29 ~Vk~rG~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~raiAaal~gd~~kVe~v~-~~~~~rf~aL~sG~vDil~~~~T~T 107 (342)
T Consensus 297 WL~~hP~irv~~~~~~aP~sf~D~~G~~~Gi~aD~L~lIs~rtG---L~Fe~v~~~~~~~~~~~l~~g~~D~l-~~~~~s 372 (1197)
T PRK09959 297 WIKQHPDLKVLENPYSPPYSMTDENGSVRGVMGDILNIITLQTG---LNFSPITVSHNIHAGTQLNPGGWDIL-PGAIYS 372 (1197)
T ss_pred HHHHCCCEEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHC---CEEEEEECCCHHHHHHHHHCCCCHHC-CCCCCC
T ss_conf 99978975997179989945788899764327999999999879---66899836987999999876981220-323578
Q ss_pred CCCHHCCCCCCCCCCCCCCEEEEEECCC-CCCCHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHH
Q ss_conf 3201102784353223440234630211-347536417862034313426999999998629985078747989999998
Q gi|254780170|r 108 LLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAY 186 (342)
Q Consensus 108 ~~Rd~~~~v~Fs~~~~~dgq~~lVrk~~-~i~s~~dL~G~~I~v~~GTT~e~~l~~~~~~~~~~~~~v~~~~~~~a~~al 186 (342)
T Consensus 373 ~~r~--~~l~fT~py~~~p~ViV~r~~~~~~~~l~--~gkrvai~~~~~~~----~~l~~~yP~i~~v~v~s~~~al~~v 444 (1197)
T PRK09959 373 EDRE--NNVLFAEAFITTPYVFVMQKAPDSEQTLK--KGMKVAIPYYYELH----SQLKEMYPEVEWIKVDNASAAFHKV 444 (1197)
T ss_pred CCCC--CCCEECCCCCCCCEEEEEECCCCCCCCHH--CCCEEEECCCCCHH----HHHHHHCCCCEEEEECCHHHHHHHH
T ss_conf 5443--46554132356875999963786301142--19889991785068----9999868983499809999999999
Q ss_pred HCCCEEEEEECCHHHHHHHHHCCCCHHHCCC-CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 7396029982504799999836780010025-64442371010002777579999887744331121233015
Q gi|254780170|r 187 RAHRCDAYTGDISALYALKLTNDRPSEHVIL-PDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 (342)
Q Consensus 187 ~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il-~e~iskEPlg~avr~gD~~w~d~V~W~~~ali~Aee~git~ 258 (342)
T Consensus 445 ~~G~aDa~v~~l~~a~y~i~~-~~~~~L~~~~~~~~~~~~lafaV~~d~peL~sILnKaL~sIpp~E~~~I~~ 516 (1197)
T PRK09959 445 KEGELDALVATQLNSRYMIDH-YYPNELYHFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPPSEVLRLTE 516 (1197)
T ss_pred HCCCCCEEEEHHHHHHHHHHH-HCCCCCEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 778876674244778999987-456650487415877632699987998899999999998399999999998