HHsearch alignment for GI: 254780170 and conserved domain: PRK09959
>PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional.
Probab=99.84 E-value=1.9e-18 Score=137.13 Aligned_cols=246 Identities=12% Similarity=0.072 Sum_probs=180.5
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCC----------------------HHHHHHHHCCEEEEEE-ECCCCCCEEECCCCCEE
Q ss_conf 913899999999999984012442----------------------1689998579499987-17898830688989880
Q gi|254780170|r 1 MYKDFFVSILCLIILFFTSFSTNA----------------------SILGDIKKRGFLKCGI-NTGLVGFAEVKANGDWK 57 (342)
Q Consensus 1 M~K~~l~~~l~l~~~~~~~~aa~a----------------------~tLd~Vk~rG~L~vGv-~~~~ppfs~~d~~G~~~ 57 (342)
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~d~~WL~~~~~l~vgv~~pd~~Pf~~~~~~~~ye 80 (1197)
T PRK09959 1 MKFLPYIFLLCCGLWSTISFADEDYIEYRGISSNNRVTLDPLRLSNKELRWLASKKNLVIAVHKSQTATLLHTDSQQRVR 80 (1197)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCEEEECCCCCCC
T ss_conf 96421699999888756766531044122456887132457789979999997388589971068899967727998646
Q ss_pred EEHHHHHHHHHHHHCCCCCEEEEEE-CCCCCCHHHHHCCCEEEEEECCCCCCCCHHCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 1509999999999679822025998-143100267743962799812432532011027843532234402346302113
Q gi|254780170|r 58 GFDVDFCRALSSAIFDDPSKIQYLP-LNAKERFLALQSKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKKG 136 (342)
Q Consensus 58 GfDVDl~raiAaal~gd~~kVe~v~-~~~~~rf~aL~sG~vDil~~~~T~T~~Rd~~~~v~Fs~~~~~dgq~~lVrk~~~ 136 (342)
T Consensus 81 GI~ADYl~li~~~L~---~~i~v~~y~~r~~al~AL~~GeIDl~~~~~~~~~~~--~~~~~~s~p~~~~~p~~v~~~~~~ 155 (1197)
T PRK09959 81 GINADYLNLLKRALN---IKLTLREYADHQKAMDALEEGEVDIVLSHLVASPPL--NDDIAATKPLIITFPALVTTLHDS 155 (1197)
T ss_pred CCCHHHHHHHHHHHC---CCEEEEECCCHHHHHHHHHCCCCCEECCCCCCCCCC--CCCCCCCCCCCCCCCEEEEECCCC
T ss_conf 847999999999868---987999569999999999759975634544457642--346533685323675589973333
Q ss_pred CCCHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCHHHCC
Q ss_conf 47536417862034313426999999998629985078747989999998739602998250479999983678001002
Q gi|254780170|r 137 ISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVI 216 (342)
Q Consensus 137 i~s~~dL~G~~I~v~~GTT~e~~l~~~~~~~~~~~~~v~~~~~~~a~~al~~Gr~DA~~~D~s~La~~~~~~~~p~~~~i 216 (342)
T Consensus 156 ~~~~~~~~~~~va~v~~y~~~~----~i~~~yP~a~i~~~~s~~~Al~AVa~G~aD~~igd~~s~~~li~~~~-~~~l~~ 230 (1197)
T PRK09959 156 MRPLTSSKPVNIARVANYPPDE----VIHQSFPKATIISFTNLYQALASVSAGQNDYFIGSNIITSSMISRYF-THSLNV 230 (1197)
T ss_pred CCCCCCCCCEEEEEECCCCCHH----HHHHHCCCCEEEECCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHC-CCCEEE
T ss_conf 5876567752799957889879----99985996669966899999999977998889602999999997440-268035
Q ss_pred CCCCCCCCCE---EEECCCCCHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 5644423710---10002777579999887744331121233015
Q gi|254780170|r 217 LPDIISKSPL---APAIIQGDTEWYNIVSWTHYAMVTAEELGITQ 258 (342)
Q Consensus 217 l~e~iskEPl---g~avr~gD~~w~d~V~W~~~ali~Aee~git~ 258 (342)
T Consensus 231 ~--~~~~~~~~~~~f~~~~~~~~L~~~in~~L~~i~~~~~~~i~~ 273 (1197)
T PRK09959 231 V--KYYNSPRQYNFFLTRKESVILNEVLNRFVDALTNEVRYEVSQ 273 (1197)
T ss_pred E--ECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 2--124577644157878875789999999998379667999997