HHsearch alignment for GI: 254780170 and conserved domain: pfam01379
>pfam01379 Porphobil_deam Porphobilinogen deaminase, dipyromethane cofactor binding domain.
Probab=94.17 E-value=0.44 Score=27.15 Aligned_cols=145 Identities=17% Similarity=0.130 Sum_probs=77.6
Q ss_pred CCHHHHHCCCEEEEEECCCCCCCCHHCCCCCCCCCC-CCCCEEEEEECCCCCCCHHHH-CCCCEEEEECCCHHHHHHHHH
Q ss_conf 002677439627998124325320110278435322-344023463021134753641-786203431342699999999
Q gi|254780170|r 87 ERFLALQSKQIDILSRNTDWTLLREISLGLAFRPIT-YFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYF 164 (342)
Q Consensus 87 ~rf~aL~sG~vDil~~~~T~T~~Rd~~~~v~Fs~~~-~~dgq~~lVrk~~~i~s~~dL-~G~~I~v~~GTT~e~~l~~~~ 164 (342)
T Consensus 61 ele~aLl~~~iDiAVHS~KDlP~~~-~~~l~i~avl~R~d~rD~Li~~--~~~~l~~lp~ga~IG----TSS~RR-~aql 132 (213)
T pfam01379 61 ELEEALLNGEIDLAVHSLKDVPTEL-PEGLVLGAIPKREDPRDALVSR--NGKSLEDLPEGSVVG----TSSLRR-SAQL 132 (213)
T ss_pred HHHHHHHCCCCCEEEEECCCCCCCC-CCCCEEEEEECCCCHHHHHHCC--CCCCHHHCCCCCEEE----CCCHHH-HHHH
T ss_conf 9999997098787876046577647-9874687664478866644302--676665677676553----253779-9999
Q ss_pred HHCCCCCCEEEECCH-HHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCHHHCCCCCCC----CCCCEEEECCCCCHHHHH
Q ss_conf 862998507874798-999999873960299825047999998367800100256444----237101000277757999
Q gi|254780170|r 165 KAHNMKYHPIVFERV-EEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDII----SKSPLAPAIIQGDTEWYN 239 (342)
Q Consensus 165 ~~~~~~~~~v~~~~~-~~a~~al~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il~e~i----skEPlg~avr~gD~~w~d 239 (342)
T Consensus 133 ~~~~pdl~~~~iRGNV~TRl~KL~~g~~DaiiLA~Agl--~RL~l~~~i~~~l~~~~~~PA~gQGaIaie~r~~d~~i~~ 210 (213)
T pfam01379 133 KRKRPDLKFEPLRGNVDTRLRKLDEGEYDAIILAAAGL--KRLGLEDRITQSLPPEDMLPAVGQGALAIECRKGDEEILA 210 (213)
T ss_pred HHHCCCCCEEECCCCHHHHHHHHHCCCCCEEEEHHHHH--HHCCCCCCCCEECCHHHCCCHHHHHHEEEEEECCCHHHHH
T ss_conf 98689984677668889999997578987986367678--6668731140671877648837430369988169899999
Q ss_pred HH
Q ss_conf 98
Q gi|254780170|r 240 IV 241 (342)
Q Consensus 240 ~V 241 (342)
T Consensus 211 ll 212 (213)
T pfam01379 211 LL 212 (213)
T ss_pred HH
T ss_conf 74