HHsearch alignment for GI: 254780170 and conserved domain: pfam03180
>pfam03180 Lipoprotein_9 NLPA lipoprotein. This family of bacterial lipoproteins contains several antigenic members, that may be involved in bacterial virulence. Their precise function is unknown. However they are probably distantly related to pfam00497 which are solute binding proteins.
Probab=91.98 E-value=0.18 Score=29.55 Aligned_cols=91 Identities=12% Similarity=0.110 Sum_probs=59.6
Q ss_pred CEEEEECCCHHH--HHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCEEEEEECC-HHHHHHHHHCCCCHHHCCCCCCCCC
Q ss_conf 203431342699--9999998629985078747989999998739602998250-4799999836780010025644423
Q gi|254780170|r 147 SICVQAGTTTEL--TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDI-SALYALKLTNDRPSEHVILPDIISK 223 (342)
Q Consensus 147 ~I~v~~GTT~e~--~l~~~~~~~~~~~~~v~~~~~~~a~~al~~Gr~DA~~~D~-s~La~~~~~~~~p~~~~il~e~isk 223 (342)
T Consensus 2 kvG~~~~p~~~i~~~v~~~~~~~Gi~veiv~F~Dy~~pN~AL~~GeIDaN~fQH~~yl~~~--n~~~g~~L~~v~~-~~~ 78 (236)
T pfam03180 2 KVGATPGPHAEVLEVAKPLAKKKGLDLEIVEFTDYVQPNTALADGEIDANAFQHLPYLDQF--NKEGGLDLVAVGN-THV 78 (236)
T ss_pred EEEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHCCCCCHHHHCCHHHHHHH--HHHCCCCEEEEEE-EEE
T ss_conf 8964389769999999999996498799998168645507977899552444389999999--9977996799630-467
Q ss_pred CCEEE-----------------ECCCCCHHHHHH
Q ss_conf 71010-----------------002777579999
Q gi|254780170|r 224 SPLAP-----------------AIIQGDTEWYNI 240 (342)
Q Consensus 224 EPlg~-----------------avr~gD~~w~d~ 240 (342)
T Consensus 79 ~p~glYS~k~ksl~~lp~Ga~IaIpnD~sN~~RA 112 (236)
T pfam03180 79 EPIGLYSKKYKSLSELPDGATIAVPNDPSNEGRA 112 (236)
T ss_pred CCEEEEECCCCCHHHCCCCCEEEECCCCCHHHHH
T ss_conf 2379543376887585799989815884429999