HHsearch alignment for GI: 254780170 and conserved domain: smart00094
>smart00094 TR_FER Transferrin.
Probab=90.02 E-value=0.73 Score=25.78 Aligned_cols=188 Identities=16% Similarity=0.164 Sum_probs=96.5
Q ss_pred HHHHHHHHHHCCCC-CEEEEEE-CCCCCCHHHHHCCCEEEEEE--CCCCCCCCHHCCCCCCCC---------CCCCCCEE
Q ss_conf 99999999967982-2025998-14310026774396279981--243253201102784353---------22344023
Q gi|254780170|r 62 DFCRALSSAIFDDP-SKIQYLP-LNAKERFLALQSKQIDILSR--NTDWTLLREISLGLAFRP---------ITYFDGQG 128 (342)
Q Consensus 62 Dl~raiAaal~gd~-~kVe~v~-~~~~~rf~aL~sG~vDil~~--~~T~T~~Rd~~~~v~Fs~---------~~~~dgq~ 128 (342)
T Consensus 12 ~KC~~~~~~~~~~~~p~~~Cv~~~s~~~Ci~~I~~~~AD~~tldgg~vy~A~~~y~L~Pi~~E~y~~~~~~~~~Y~--aV 89 (332)
T smart00094 12 SKCDQWSVNSRGRDVPALECVSASSTEECIKAIQKGEADAVTLDGGDVYTAGKPYNLVPVFAENYGSEEEPETGYY--AV 89 (332)
T ss_pred HHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEECHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEE--EE
T ss_conf 9999999996027999648640899999999986699888986838988521238862788610147789874479--99
Q ss_pred EEEECCCCCCCHHHHCCCCEEEE-ECCC----------------------HHHHHHHHHHHCCCC---------------
Q ss_conf 46302113475364178620343-1342----------------------699999999862998---------------
Q gi|254780170|r 129 FIMHKKKGISSVSQLSGASICVQ-AGTT----------------------TELTLADYFKAHNMK--------------- 170 (342)
Q Consensus 129 ~lVrk~~~i~s~~dL~G~~I~v~-~GTT----------------------~e~~l~~~~~~~~~~--------------- 170 (342)
T Consensus 90 AVVkk~s~~~~~~~LrGkkSCHtG~g~tAGW~iPig~L~~~~~i~~~~c~~~~avs~FFs~SCvPGa~~~~~~~~LC~lC 169 (332)
T smart00094 90 AVVKKGSAIFTWNQLRGKKSCHTGVGRTAGWNIPMGLLYNKLVIRPPNCPFEKAVSKFFSASCAPGADKPDPNSNLCALC 169 (332)
T ss_pred EEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHC
T ss_conf 99977887678778378863035788854302027989754776788982788999871455567888887654578755
Q ss_pred --------CCEEEECCHHHHHHHHHCCCEEEEEECCHHHHHHH--------HHCCCCHHHCCCCCCCCCCCE--------
Q ss_conf --------50787479899999987396029982504799999--------836780010025644423710--------
Q gi|254780170|r 171 --------YHPIVFERVEEIDAAYRAHRCDAYTGDISALYALK--------LTNDRPSEHVILPDIISKSPL-------- 226 (342)
Q Consensus 171 --------~~~v~~~~~~~a~~al~~Gr~DA~~~D~s~La~~~--------~~~~~p~~~~il~e~iskEPl-------- 226 (342)
T Consensus 170 ~G~~kC~~~~~e~Y~Gy~GAfRCL~eg~GDVAFvkhttV~e~~~g~~~~~wa~~~~~~dyeLLC~dGtr~pv~~~~~C~L 249 (332)
T smart00094 170 AGDNKCACSSHEPYYGYSGAFRCLAEGAGDVAFVKHSTVFENTDGKNGADWAKNLKRDDYELLCLDGTRKPVTEYKNCHL 249 (332)
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCHHHCCCCCCCCHHHHCCCHHHEEEECCCCCCCCHHHHCCCCC
T ss_conf 89987689988767574337776523998679981645542058866510221147111377899989788445032751
Q ss_pred ------EEECCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf ------100027775799998877443311212330
Q gi|254780170|r 227 ------APAIIQGDTEWYNIVSWTHYAMVTAEELGI 256 (342)
Q Consensus 227 ------g~avr~gD~~w~d~V~W~~~ali~Aee~gi 256 (342)
T Consensus 250 a~vP~haVvtr~~~---~~~~~~~ll~~--~~~fg~ 280 (332)
T smart00094 250 ARVPSHAVVARKDK---KEDVIWELLNQ--QQKFGK 280 (332)
T ss_pred CCCCCCCEEECCCC---HHHHHHHHHHH--HHHHCC
T ss_conf 03788607966772---38999999999--999658