HHsearch results for GI: 254780170 and protein with PDBid: 1xs5_A
>1xs5_A 29 kDa protein, membrane lipoprotein TPN32; periplasmic binding protein, methionine, membrane protein; 1.85A {Treponema pallidum} SCOP: c.94.1.1
Probab=98.32 E-value=2.9e-06 Score=58.62 Aligned_cols=181 Identities=10% Similarity=0.022 Sum_probs=102.4
Q ss_pred CEEEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEC-CCCCCHHHHHCCCEEEEEECCCCCCC---
Q ss_conf 94999871789883068898988015099999999996798220259981-43100267743962799812432532---
Q gi|254780170|r 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPL-NAKERFLALQSKQIDILSRNTDWTLL--- 109 (342)
Q Consensus 34 G~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~raiAaal~gd~~kVe~v~~-~~~~rf~aL~sG~vDil~~~~T~T~~--- 109 (342)
.+||+|+.+. |... -.++++...+.-+ .+|||++. ++.+...||.+|++|+.+.+.+..+.
T Consensus 3 ~ti~iG~~~~-~~~~-----------~l~~~k~~~k~~G---l~Ve~~~f~~g~~~~~Al~sG~iD~~~~g~~p~l~~~~ 67 (241)
T 1xs5_A 3 ETVGVGVLSE-PHAR-----------LLEIAKEEVKKQH---IELRIVEFTNYVALNEAVMRGDILMNFFQHVPHMQQFN 67 (241)
T ss_dssp EEEEEEECST-THHH-----------HHHHHHHHHHTTT---EEEEEEECSCHHHHHHHHHHTSSSEEEEEEHHHHHHHH
T ss_pred CEEEEEECCC-CHHH-----------HHHHHHHHHHHCC---CEEEEEEECCCHHHHHHHHCCCCCEEEECCHHHHHHHH
T ss_conf 3299996069-8599-----------9999999999749---88999993881778999976997679855788999988
Q ss_pred CHHCCCCCCCCCCCCCCEEEEEECCCCCCCHHHH-CCCCEEEEECCCHHHHHHHHHHHCCC-CC-----------CE---
Q ss_conf 0110278435322344023463021134753641-78620343134269999999986299-85-----------07---
Q gi|254780170|r 110 REISLGLAFRPITYFDGQGFIMHKKKGISSVSQL-SGASICVQAGTTTELTLADYFKAHNM-KY-----------HP--- 173 (342)
Q Consensus 110 Rd~~~~v~Fs~~~~~dgq~~lVrk~~~i~s~~dL-~G~~I~v~~GTT~e~~l~~~~~~~~~-~~-----------~~--- 173 (342)
|.....+-....++..+.+++.++ ++++.|+ +|++|++..+++++..+...+.+.++ .. .+
T Consensus 68 ~~~~~~l~~v~~~~~~~~~l~~~~---~~s~~d~~~gk~ia~~~~~s~~~~~~~~l~~~~~~~l~~~~~~~~~~~Di~~~ 144 (241)
T 1xs5_A 68 QEHNGDLVSVGNVHVEPLALYSRT---YRHVSDFPAGAVIAIPNDSSNEARALRLLEAAGFIRMRAGSGLFATVEDVQQN 144 (241)
T ss_dssp HHHTCCEEEEEEEEECCCEEECSS---CCSGGGCCTTCEEEEECSHHHHHHHHHHHHHTTSCEECTTCCTTCCGGGEEEC
T ss_pred HHCCCCEEEEEEECCCCEEEEECC---CCCHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHC
T ss_conf 546973899988414654888368---67766734887698258882799999999975881343688876776566534
Q ss_pred ---EEECCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEECCCCC
Q ss_conf ---8747989999998739602998250479999983678001002564442371010002777
Q gi|254780170|r 174 ---IVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGD 234 (342)
Q Consensus 174 ---v~~~~~~~a~~al~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il~e~iskEPlg~avr~gD 234 (342)
+.+-..+.+..++..|.+|+.+.-.+.+. ........+..+.++.....+..+++|+.+
T Consensus 145 ~~~~~~~~~~~a~~a~~~~~vda~~~~~p~~~--~a~~~~~~~~l~~~~~~~~~~~~lv~r~~~ 206 (241)
T 1xs5_A 145 VRNVVLQEVESALLPRVFDQVDGAVINGNYAI--MAGLSARRDGLAVEPDASAYANVLVVKRGN 206 (241)
T ss_dssp TTCCEEEEECGGGHHHHGGGSSEEEECHHHHH--HTTCCTTTTCSEECSCGGGGCEEEEEETTC
T ss_pred CCCCCCCCCCHHHHHHHCCCCCEEEECCCHHH--HHCCCCCCCEEEECCCCCCEEEEEEECCHH
T ss_conf 34454257447677774277757996464899--855887667799637898637999983401