HHsearch results for GI: 254780170 and protein with PDBid: 2b4l_A
>2b4l_A Glycine betaine-binding protein; substrate-binding protein, closed liganded, ABC-transporter, compatible solutes, transport protein; 2.00A {Bacillus subtilis} PDB: 2b4m_A* 3chg_D
Probab=93.76 E-value=0.11 Score=29.52 Aligned_cols=83 Identities=14% Similarity=0.121 Sum_probs=34.3
Q ss_pred HHHHHHHCCCCCCEEEECCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCHH---HCCCCCCCCCCCEEEECCCCCHH
Q ss_conf 999998629985078747989999998739602998250479999983678001---00256444237101000277757
Q gi|254780170|r 160 LADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSE---HVILPDIISKSPLAPAIIQGDTE 236 (342)
Q Consensus 160 l~~~~~~~~~~~~~v~~~~~~~a~~al~~Gr~DA~~~D~s~La~~~~~~~~p~~---~~il~e~iskEPlg~avr~gD~~ 236 (342)
+.++++...++ -+...++......|+ | +.=++.+.-..||+. ++--.+....+|+-++. ..
T Consensus 110 a~~~l~~~~~t-----~~~~~~l~~~i~~g~------~-~~~aA~~Wl~~n~~~v~~Wl~g~~~~~~~~i~i~~----~~ 173 (268)
T 2b4l_A 110 AAKLLSQFKWT-----QDEMGEIMIKVEEGE------K-PAKVAAEYVNKHKDQIAEWTKGVQKVKGDKINLAY----VA 173 (268)
T ss_dssp HHHHHHTCCCC-----HHHHHHHHHHHHTTC------C-HHHHHHHHHHHCHHHHHHHTTTCCCCSSCEEEEEE----CC
T ss_pred HHHHHHHCCCC-----HHHHHHHHHHHHCCC------C-HHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEE----CC
T ss_conf 99999974889-----999999999998599------9-99999999997929999885165467777515642----48
Q ss_pred HHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 9999887744331121233015
Q gi|254780170|r 237 WYNIVSWTHYAMVTAEELGITQ 258 (342)
Q Consensus 237 w~d~V~W~~~ali~Aee~git~ 258 (342)
|-+..-=+.-+-...|++|.+-
T Consensus 174 W~~~~a~t~v~~~iLe~~Gy~V 195 (268)
T 2b4l_A 174 WDSEIASTNVIGKVLEDLGYEV 195 (268)
T ss_dssp CHHHHHHHHHHHHHHHHHTCEE
T ss_pred CCHHHHHHHHHHHHHHHCCCCE
T ss_conf 7618999999999999869953