HHsearch results for GI: 254780170 and protein with PDBid: 2dvz_A
>2dvz_A BUGE, putative exported protein; periplamsic binding proteins, carboxylate binding, glutamate, transport protein; HET: GLU; 2.30A {Bordetella pertussis}
Probab=97.36 E-value=0.00052 Score=44.34 Aligned_cols=141 Identities=9% Similarity=0.031 Sum_probs=83.6
Q ss_pred HHHHHHHHH---CCCCCEEEEEECCCCC-CHHHHHCCC---EEEEEECC-CCCC---CCHHCCC----CCCCCCCC--CC
Q ss_conf 999999996---7982202599814310-026774396---27998124-3253---2011027----84353223--44
Q gi|254780170|r 63 FCRALSSAI---FDDPSKIQYLPLNAKE-RFLALQSKQ---IDILSRNT-DWTL---LREISLG----LAFRPITY--FD 125 (342)
Q Consensus 63 l~raiAaal---~gd~~kVe~v~~~~~~-rf~aL~sG~---vDil~~~~-T~T~---~Rd~~~~----v~Fs~~~~--~d 125 (342)
++|.+|..+ +|.+..|+.+|-.... -...+.+.+ .-+++.+. +++. -+..... -||.+.-. .+
T Consensus 36 ~aR~~a~~l~k~~g~~v~V~N~pGagG~~g~~~~~~~~~Dg~ti~~~~~~~~~~~~~~~~~~~~~d~~~d~~~v~~~~~~ 115 (314)
T 2dvz_A 36 IARLVTQRMSQELGQPMVVENKGGAGGAIGASEAARAEPDGYTLSIATVSTMAVNPACRPKDLPYDPIKDFQPVTNFANT 115 (314)
T ss_dssp HHHHHHHHHHHHHTSCEEEEECCCGGGHHHHHHHHHSCTTSSEEEEECHHHHTHHHHHSTTTCSCCTTTSEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHEEECC
T ss_conf 99999999999869987999669827899999998569999847761240544334541357898768875554202204
Q ss_pred CEEEEEECCCCCCCHHHHC------C--CCEEEE-ECCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCEEEEEE
Q ss_conf 0234630211347536417------8--620343-134269999999986299850787479899999987396029982
Q gi|254780170|r 126 GQGFIMHKKKGISSVSQLS------G--ASICVQ-AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG 196 (342)
Q Consensus 126 gq~~lVrk~~~i~s~~dL~------G--~~I~v~-~GTT~e~~l~~~~~~~~~~~~~v~~~~~~~a~~al~~Gr~DA~~~ 196 (342)
...++|++++++++++||- . .+++.. .|+........+.+..+++++.|+|++..++++++.+|+||+.+.
T Consensus 116 ~~v~~v~~~s~~~t~~e~i~~ak~~p~~l~~g~~~~gs~~~~~~~~l~~~~G~~~~~Vpy~g~~~~~~all~G~vd~~~~ 195 (314)
T 2dvz_A 116 ANVVAVNPKFPAKDFKGFLEELKKNPGKYSYGSSGTCGVLHLMGESFKMATGTDIVHVPYKGSGPAVADAVGGQIELIFD 195 (314)
T ss_dssp CEEEEECTTSSCSSHHHHHHHHHTSTTTCEEEESCTTSHHHHHHHHHHHHHTCCCEEEECSSHHHHHHHHHHTSSSEEEE
T ss_pred CEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCEEEEEEC
T ss_conf 30343167777567899999986399845762046642245679999998599759940488424468886794789851
Q ss_pred CCHHHHH
Q ss_conf 5047999
Q gi|254780170|r 197 DISALYA 203 (342)
Q Consensus 197 D~s~La~ 203 (342)
..+....
T Consensus 196 ~~~~~~~ 202 (314)
T 2dvz_A 196 NLPSSMP 202 (314)
T ss_dssp EHHHHHH
T ss_pred CCHHHHH
T ss_conf 3211111