HHsearch results for GI: 254780170 and protein with PDBid: 2dvz_A

>2dvz_A BUGE, putative exported protein; periplamsic binding proteins, carboxylate binding, glutamate, transport protein; HET: GLU; 2.30A {Bordetella pertussis}
Probab=97.36  E-value=0.00052  Score=44.34  Aligned_cols=141  Identities=9%  Similarity=0.031  Sum_probs=83.6

Q ss_pred             HHHHHHHHH---CCCCCEEEEEECCCCC-CHHHHHCCC---EEEEEECC-CCCC---CCHHCCC----CCCCCCCC--CC
Q ss_conf             999999996---7982202599814310-026774396---27998124-3253---2011027----84353223--44
Q gi|254780170|r   63 FCRALSSAI---FDDPSKIQYLPLNAKE-RFLALQSKQ---IDILSRNT-DWTL---LREISLG----LAFRPITY--FD  125 (342)
Q Consensus        63 l~raiAaal---~gd~~kVe~v~~~~~~-rf~aL~sG~---vDil~~~~-T~T~---~Rd~~~~----v~Fs~~~~--~d  125 (342)
                      ++|.+|..+   +|.+..|+.+|-.... -...+.+.+   .-+++.+. +++.   -+.....    -||.+.-.  .+
T Consensus        36 ~aR~~a~~l~k~~g~~v~V~N~pGagG~~g~~~~~~~~~Dg~ti~~~~~~~~~~~~~~~~~~~~~d~~~d~~~v~~~~~~  115 (314)
T 2dvz_A           36 IARLVTQRMSQELGQPMVVENKGGAGGAIGASEAARAEPDGYTLSIATVSTMAVNPACRPKDLPYDPIKDFQPVTNFANT  115 (314)
T ss_dssp             HHHHHHHHHHHHHTSCEEEEECCCGGGHHHHHHHHHSCTTSSEEEEECHHHHTHHHHHSTTTCSCCTTTSEEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHEEECC
T ss_conf             99999999999869987999669827899999998569999847761240544334541357898768875554202204


Q ss_pred             CEEEEEECCCCCCCHHHHC------C--CCEEEE-ECCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCEEEEEE
Q ss_conf             0234630211347536417------8--620343-134269999999986299850787479899999987396029982
Q gi|254780170|r  126 GQGFIMHKKKGISSVSQLS------G--ASICVQ-AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTG  196 (342)
Q Consensus       126 gq~~lVrk~~~i~s~~dL~------G--~~I~v~-~GTT~e~~l~~~~~~~~~~~~~v~~~~~~~a~~al~~Gr~DA~~~  196 (342)
                      ...++|++++++++++||-      .  .+++.. .|+........+.+..+++++.|+|++..++++++.+|+||+.+.
T Consensus       116 ~~v~~v~~~s~~~t~~e~i~~ak~~p~~l~~g~~~~gs~~~~~~~~l~~~~G~~~~~Vpy~g~~~~~~all~G~vd~~~~  195 (314)
T 2dvz_A          116 ANVVAVNPKFPAKDFKGFLEELKKNPGKYSYGSSGTCGVLHLMGESFKMATGTDIVHVPYKGSGPAVADAVGGQIELIFD  195 (314)
T ss_dssp             CEEEEECTTSSCSSHHHHHHHHHTSTTTCEEEESCTTSHHHHHHHHHHHHHTCCCEEEECSSHHHHHHHHHHTSSSEEEE
T ss_pred             CEEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCEEEEEEC
T ss_conf             30343167777567899999986399845762046642245679999998599759940488424468886794789851


Q ss_pred             CCHHHHH
Q ss_conf             5047999
Q gi|254780170|r  197 DISALYA  203 (342)
Q Consensus       197 D~s~La~  203 (342)
                      ..+....
T Consensus       196 ~~~~~~~  202 (314)
T 2dvz_A          196 NLPSSMP  202 (314)
T ss_dssp             EHHHHHH
T ss_pred             CCHHHHH
T ss_conf             3211111