HHsearch results for GI: 254780170 and protein with PDBid: 2o1m_A
>2o1m_A Probable amino-acid ABC transporter extracellular-binding protein YTMK; NESG X-RAY O34852 YTMK_bacsu, structural genomics, PSI-2; 2.00A {Bacillus subtilis}
Probab=100.00 E-value=1.3e-35 Score=244.43 Aligned_cols=221 Identities=14% Similarity=0.204 Sum_probs=186.9
Q ss_pred CHHHHHHHHCCEEEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCEEEEEEC
Q ss_conf 21689998579499987178988306889898801509999999999679822025998143100267743962799812
Q gi|254780170|r 24 ASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRN 103 (342)
Q Consensus 24 a~tLd~Vk~rG~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~raiAaal~gd~~kVe~v~~~~~~rf~aL~sG~vDil~~~ 103 (342)
..+....++.++|+||++.++|||+|.|++|+++||++|+++++|+.+.| .+++|++++|..++..|++|++|+++++
T Consensus 6 ~~~~a~~~~~~~i~V~~~~~~pP~~~~~~~g~~~G~~vDl~~~ia~~l~g--~~v~~~~~~~~~~~~~l~~g~~D~i~~~ 83 (258)
T 2o1m_A 6 QTTGAGQKKVQTITVGTGTQFPNICFIDEKGDLTGYDVELIKELDKRLPH--YKFTFKTMEFSNLLVSLGQHKVDIVAHQ 83 (258)
T ss_dssp --------CCEEEEEEECSEETTTEEECTTSCEESHHHHHHHHHHHHCTT--EEEEEEECCHHHHHHHHHTTSSSEEEEE
T ss_pred CCCCCCCCCCCEEEEEECCCCCCEEEECCCCCEEEHHHHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHCCCCCEEEEC
T ss_conf 55655456699899998999798069999996887599999999987289--8589997899999999977998889634
Q ss_pred CCCCCCCHHCCCCCCCCCCCCCCEEEE-EECC-CCCCCHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCE-EEECCHH
Q ss_conf 432532011027843532234402346-3021-134753641786203431342699999999862998507-8747989
Q gi|254780170|r 104 TDWTLLREISLGLAFRPITYFDGQGFI-MHKK-KGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHP-IVFERVE 180 (342)
Q Consensus 104 ~T~T~~Rd~~~~v~Fs~~~~~dgq~~l-Vrk~-~~i~s~~dL~G~~I~v~~GTT~e~~l~~~~~~~~~~~~~-v~~~~~~ 180 (342)
+++|++|+.. ++|+.|+|+....++ ++++ ..+++++||+|++||++.||+.+..+..+...++..... +.+++.+
T Consensus 84 ~~~~~er~~~--~~fs~~~~~~~~~~~~~~~~~~~i~~~~dL~gk~igv~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 161 (258)
T 2o1m_A 84 MEKSKEREKK--FLFNKVAYNHFPLKITVLQNNDTIRGIEDLKGKRVITSATSNGALVLKKWNEDNGRPFEIAYEGQGAN 161 (258)
T ss_dssp ECCCHHHHHH--CEECSSCCEEEEEEEEEETTCCSCSSGGGCTTCEEEECSSSHHHHHHHHHHHHTTCCSEEEECCSSTT
T ss_pred CCCCHHHHHH--CCCCCCCCCCCCEEEEEEECCCCCCCHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCEECCCCHH
T ss_conf 7678788753--13675422355428998513676551544579889870787499999999997188742010368899
Q ss_pred HHHHHHHCCCEEEEEECCHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9999987396029982504799999836780010025644423710100027775799998877443311
Q gi|254780170|r 181 EIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVT 250 (342)
Q Consensus 181 ~a~~al~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il~e~iskEPlg~avr~gD~~w~d~V~W~~~ali~ 250 (342)
+++.+|.+||+|+++.|...+...... .+.+..++.+.+..+|++++++++|++|.+.++..+..|..
T Consensus 162 ~~~~~L~~grvD~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~k~~~~L~~~ln~~l~~~~~ 229 (258)
T 2o1m_A 162 ETANQLKSGRADATISTPFAVDFQNKT--STIKEKTVGNVLSNAKVYFMFNKNEQTLSDDIDKALQEIID 229 (258)
T ss_dssp HHHHHHHHTSCSBEEECHHHHHHHHHH--CSSCEEEEEEEEEEEEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECHHHHHHHHHH--CCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
T ss_conf 999998659546999169999999852--78865881566777518999959999999999999999996