HHsearch results for GI: 254780170 and protein with PDBid: 2qpq_A
>2qpq_A Protein BUG27; alpha/beta domain, venus flytrap, transport protein; HET: CIT; 1.92A {Bordetella pertussis}
Probab=97.10 E-value=0.0023 Score=40.20 Aligned_cols=145 Identities=10% Similarity=0.112 Sum_probs=85.4
Q ss_pred EEHHHHHHHHHHHH---CCCCCEEEEEECCCCCC-HHHHHC---CCEEEEEECCCCC--C--CCHHCC-C-CCCCCC--C
Q ss_conf 15099999999996---79822025998143100-267743---9627998124325--3--201102-7-843532--2
Q gi|254780170|r 58 GFDVDFCRALSSAI---FDDPSKIQYLPLNAKER-FLALQS---KQIDILSRNTDWT--L--LREISL-G-LAFRPI--T 122 (342)
Q Consensus 58 GfDVDl~raiAaal---~gd~~kVe~v~~~~~~r-f~aL~s---G~vDil~~~~T~T--~--~Rd~~~-~-v~Fs~~--~ 122 (342)
|.|+ +||.+|..+ +|.+.-|+.+|-..... ...+.. .-..+++.+.+.. . .++... . -+|.+. .
T Consensus 21 g~D~-~aR~~a~~l~~~lg~~vvV~N~pGagG~~g~~~~~~~~~dg~t~l~~~~~~~~~~~~~~~~~~~~~~d~~~v~~~ 99 (301)
T 2qpq_A 21 GTDM-LARLIGNYLTESLGQTAVVENRPGASGNVGARLVADRAPDGYSLLMVNSSFAVNPGVFRNLPFDPKKDFAAVINV 99 (301)
T ss_dssp HHHH-HHHHHHHHHHHGGGSCEEEEECCTGGGHHHHHHHHTSCSSSSEEEEEETHHHHHHHHCTTCSSCTTTTEEEEEEE
T ss_pred HHHH-HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCHHEEEHHHCCCCCCCHHHHHHEEEEE
T ss_conf 8999-999999999998799879996799611999999985688998257723312341755088988826642012331
Q ss_pred CCCCEEEEEECCCCCCCHHHHC-------C-CCEEEE-ECCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCEEE
Q ss_conf 3440234630211347536417-------8-620343-134269999999986299850787479899999987396029
Q gi|254780170|r 123 YFDGQGFIMHKKKGISSVSQLS-------G-ASICVQ-AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDA 193 (342)
Q Consensus 123 ~~dgq~~lVrk~~~i~s~~dL~-------G-~~I~v~-~GTT~e~~l~~~~~~~~~~~~~v~~~~~~~a~~al~~Gr~DA 193 (342)
..+...++|++++++++++||- | .+++.. .|+........+.+..+++++.|.|++..+++.++..|++|+
T Consensus 100 ~~~~~~lvv~~ds~~~t~~el~~~ak~~p~~~~~g~~g~g~~~~~~~~~~~~~~g~~~~~Vpy~G~~~~~~all~G~vd~ 179 (301)
T 2qpq_A 100 AYVPSVFVVPAGSKYKTLGELMAAAKQTNTQVTYGSCGNGTPQHLAGELLNVSAKTHMVHVPYKGCGPALNDVLGSQIGL 179 (301)
T ss_dssp EEEEEEEEEETTCSCCSHHHHHHHTCSSSCCCEEEESSTTSHHHHHHHHHHHHHTCCCEEEECSSHHHHHHHHHTTSSSC
T ss_pred CCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCEEEE
T ss_conf 35656999737777440267777643103234251378987999999999861456623661178588888875584455
Q ss_pred EEECCHHHHH
Q ss_conf 9825047999
Q gi|254780170|r 194 YTGDISALYA 203 (342)
Q Consensus 194 ~~~D~s~La~ 203 (342)
.+...+....
T Consensus 180 ~~~~~~~~~~ 189 (301)
T 2qpq_A 180 AVVTASSAIP 189 (301)
T ss_dssp EEEEHHHHHH
T ss_pred EECCHHHHHH
T ss_conf 5346787664