HHsearch results for GI: 254780170 and protein with PDBid: 3del_B
>3del_B Arginine binding protein; alpha and beta protein (A/B), periplasmic protein, protein binding, transport protein; 1.92A {Chlamydia trachomatis}
Probab=100.00 E-value=1.7e-31 Score=218.40 Aligned_cols=208 Identities=16% Similarity=0.105 Sum_probs=173.0
Q ss_pred CEEEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCCHHC
Q ss_conf 94999871789883068898988015099999999996798220259981431002677439627998124325320110
Q gi|254780170|r 34 GFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQSKQIDILSRNTDWTLLREIS 113 (342)
Q Consensus 34 G~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~raiAaal~gd~~kVe~v~~~~~~rf~aL~sG~vDil~~~~T~T~~Rd~~ 113 (342)
..|+||+++++|||+|.|++|+++||++|+++++|..++ .+++|++++|+.++.+|++|++|+++++++++.+|+.
T Consensus 11 ~~l~Vg~~~~~pP~~~~~~~G~~~G~~vDi~~~ia~~lg---~~v~~~~~~~~~~~~~l~~g~~d~~~~~~~~~~~r~~- 86 (242)
T 3del_B 11 EKFIVGTNATYPPFEFVDKRGEVVGFDIDLAREISNKLG---KTLDVREFSFDALILNLKQHRIDAVITGMSITPSRLK- 86 (242)
T ss_dssp CEEEEEECSCBTTTBEECTTSCEESHHHHHHHHHHHHHT---CEEEEEECCGGGHHHHHHTTSSSEECSSBBCCHHHHT-
T ss_pred CEEEEEECCCCCCCEEECCCCCEEEEHHHHHHHHHHHHC---CCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHH-
T ss_conf 969999899889915899999888729999999999969---9769997898999999975986610035769988983-
Q ss_pred CCCCCCCCCCCCCEEE-EEECCCCCCCHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCEE
Q ss_conf 2784353223440234-630211347536417862034313426999999998629985078747989999998739602
Q gi|254780170|r 114 LGLAFRPITYFDGQGF-IMHKKKGISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCD 192 (342)
Q Consensus 114 ~~v~Fs~~~~~dgq~~-lVrk~~~i~s~~dL~G~~I~v~~GTT~e~~l~~~~~~~~~~~~~v~~~~~~~a~~al~~Gr~D 192 (342)
.+.|+++|+...+.+ +++++..++++++|+|++|||+.||..+..+++ ....+++.|++..+++.+|.+||||
T Consensus 87 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Vgv~~gs~~~~~l~~-----~~~~~i~~~~~~~~~~~~L~~griD 160 (242)
T 3del_B 87 -EILMIPYYGEEIKHLVLVFKGENKHPLPLTQYRSVAVQTGTYQEAYLQS-----LSEVHIRSFDSTLEVLMEVMHGKSP 160 (242)
T ss_dssp -TEEEEEEEEEEESEEEEEEESCCSCCCCGGGSSCEEEETTSHHHHHHHH-----STTCCEEEESSHHHHHHHHHTTSSS
T ss_pred -HCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCEEEECCCHHHHHHHH-----CCCCEEEEEECCCHHHHHHHCCCEE
T ss_conf -1367864323553268863154332134420220024257435899985-----6587079861453125688639743
Q ss_pred EEEECCHHHHHHHHHCCCCHH-HCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 998250479999983678001-00256444237101000277757999988774433112
Q gi|254780170|r 193 AYTGDISALYALKLTNDRPSE-HVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAMVTA 251 (342)
Q Consensus 193 A~~~D~s~La~~~~~~~~p~~-~~il~e~iskEPlg~avr~gD~~w~d~V~W~~~ali~A 251 (342)
+++.|...+.......+.-.. ...+++.....+++++++++|+++.+.++..+..|.+-
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~k~~~~l~~~ln~al~~l~~~ 220 (242)
T 3del_B 161 VAVLEPSIAQVVLKDFPALSTATIDLPEDQWVLGYGIGVASDRPALALKIEAAVQEIRKE 220 (242)
T ss_dssp EEEECHHHHHHHGGGCTTEEEEEEECCGGGCEEEEEEEEETTCHHHHHHHHHHHHHHHHT
T ss_pred EEEECHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHC
T ss_conf 999669999999985887634542268765432689999489999999999999999978