HHsearch results for GI: 254780170 and protein with PDBid: 3ir1_A
>3ir1_A Outer membrane lipoprotein GNA1946; D-methionine cultured, protein binding; 2.15A {Neisseria meningitidis}
Probab=92.77 E-value=0.079 Score=30.49 Aligned_cols=81 Identities=10% Similarity=0.054 Sum_probs=53.4
Q ss_pred CCEEEEECCCHHH---HHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCEEEE-EECCHHHHHHHHHCCCCHHHCCCCCCC
Q ss_conf 6203431342699---999999862998507874798999999873960299-825047999998367800100256444
Q gi|254780170|r 146 ASICVQAGTTTEL---TLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAY-TGDISALYALKLTNDRPSEHVILPDII 221 (342)
Q Consensus 146 ~~I~v~~GTT~e~---~l~~~~~~~~~~~~~v~~~~~~~a~~al~~Gr~DA~-~~D~s~La~~~~~~~~p~~~~il~e~i 221 (342)
.+||+..|.-.+. .++..+++.|++.+++.|+++.+.-.||.+|++|+- ....+-|...... +..+.+.+. .+
T Consensus 3 i~vg~~~~p~~~~~~e~vk~~~k~~Gi~vevv~f~D~~~~N~AL~~GeiDaN~fQh~~yl~~~n~~--~g~~L~~v~-~~ 79 (245)
T 3ir1_A 3 IVFGTTVGDFGDMVKEQIQPELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHKPYLDDFKKE--HNLDITEVF-QV 79 (245)
T ss_dssp EEEEEETTHHHHHHHHTHHHHHHTTTCEEEEEEESSSSHHHHHHHHTSCSEEEEECHHHHHHHHHH--HTCCEEEEE-EC
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCCEEHHCCHHHHHHHHHH--CCCCEEEEE-EE
T ss_conf 999807898799999998899996597699999568521779986699652312279999999998--599669986-65
Q ss_pred CCCCEEEE
Q ss_conf 23710100
Q gi|254780170|r 222 SKSPLAPA 229 (342)
Q Consensus 222 skEPlg~a 229 (342)
-.+|+|+.
T Consensus 80 ~~~p~glY 87 (245)
T 3ir1_A 80 PTAPLGLY 87 (245)
T ss_dssp CBCCCEEE
T ss_pred EECCEEEE
T ss_conf 44242765