HHsearch results for GI: 254780170 and protein with PDBid: 3mpk_A
>3mpk_A Virulence sensor protein BVGS; venus flytrap, sensor domain, signaling protein; 2.04A {Bordetella pertussis} PDB: 3mpl_A
Probab=100.00 E-value=3.8e-32 Score=222.52 Aligned_cols=224 Identities=13% Similarity=0.086 Sum_probs=186.4
Q ss_pred HHHHHCCCCCHHHHHHHHCCEEEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEECC-CCCCHHHHH
Q ss_conf 9984012442168999857949998717898830688989880150999999999967982202599814-310026774
Q gi|254780170|r 15 LFFTSFSTNASILGDIKKRGFLKCGINTGLVGFAEVKANGDWKGFDVDFCRALSSAIFDDPSKIQYLPLN-AKERFLALQ 93 (342)
Q Consensus 15 ~~~~~~aa~a~tLd~Vk~rG~L~vGv~~~~ppfs~~d~~G~~~GfDVDl~raiAaal~gd~~kVe~v~~~-~~~rf~aL~ 93 (342)
+.++.++-...-.+-|++.++|++|+..++|||+|.|++|+++||++|+++++++.++ .+++++++. |...+.+|+
T Consensus 13 ~~~~~p~~t~~e~~wl~~~~~l~v~~~~~~~P~~~~~~~g~~~G~~~dll~~i~~~lg---~~~~~~~~~~~~~~~~~l~ 89 (267)
T 3mpk_A 13 LDFAHPAYSAREQQWMADHPVVKVAVLNLFAPFTLFRTDEQFGGISAAVLQLLQLRTG---LDFEIIGVDTVEELIAKLR 89 (267)
T ss_dssp ----CCCCCHHHHHHHHHCSEEEEEEETEETTTEECCTTCCCBSHHHHHHHHHHHHHC---CEEEEEEESSHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCEEECCCCCEEEHHHHHHHHHHHHHC---CCEEEEEECCHHHHHHHHH
T ss_conf 4535778999999999829939999848989956998999887789999999999849---9579998289999999863
Q ss_pred CCCEEEEEECCCCCCCCHHCCCCCCCCCCCCCCEEEEEECCC-CCCCHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCC
Q ss_conf 396279981243253201102784353223440234630211-3475364178620343134269999999986299850
Q gi|254780170|r 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMHKKK-GISSVSQLSGASICVQAGTTTELTLADYFKAHNMKYH 172 (342)
Q Consensus 94 sG~vDil~~~~T~T~~Rd~~~~v~Fs~~~~~dgq~~lVrk~~-~i~s~~dL~G~~I~v~~GTT~e~~l~~~~~~~~~~~~ 172 (342)
+|++|++ .++++|.+|+ ..+.|+.||+.....+++++++ .+.++++|+|++||+..|++....+ .......+
T Consensus 90 ~g~~Di~-~~~~~t~~r~--~~~~~s~p~~~~~~~~v~~~~~~~~~~~~~l~g~~i~~~~g~~~~~~l----~~~~~~~~ 162 (267)
T 3mpk_A 90 SGEADMA-GALFVNSARE--SFLSFSRPYVRNGMVIVTRQDPDAPVDADHLDGRTVALVRNSAAIPLL----QRRYPQAK 162 (267)
T ss_dssp HTSCSEE-EEEECCGGGT--TTEEECSCSEEECEEEEEESSTTSCSSGGGCTTCEEEEETTCTHHHHH----HHHCTTSE
T ss_pred CCCEEEE-ECCCCCHHHH--HCCCCCCCEECCCEEEEEECCCCCCCCHHHHCCCCEEEECCCHHHHHH----HHHCCCCE
T ss_conf 6966599-6478998898--407767621304404542014434579889658730554154056999----97288741
Q ss_pred EEEECCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 7874798999999873960299825047999998367800100256444237101000277757999988774433
Q gi|254780170|r 173 PIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRPSEHVILPDIISKSPLAPAIIQGDTEWYNIVSWTHYAM 248 (342)
Q Consensus 173 ~v~~~~~~~a~~al~~Gr~DA~~~D~s~La~~~~~~~~p~~~~il~e~iskEPlg~avr~gD~~w~d~V~W~~~al 248 (342)
++.|++..+++++|.+|||||++.|...+.....+...++..++.+..++..+++++++++|++|.++++.++..|
T Consensus 163 i~~~~~~~~~l~~L~~GrvDa~i~~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~k~~~~L~~~in~~L~~l 238 (267)
T 3mpk_A 163 VVTADNPSEAMLMVANGQADAVVQTQISASYYVNRYFAGKLRIASALDLPPAEIALATTRGQTELMSILNKALYSI 238 (267)
T ss_dssp EEEESSHHHHHHHHHHTSCSEEEEEHHHHHHHHHHHCTTTEEEEEECSSCCEEEEEEEETTCHHHHHHHHHHHHTS
T ss_pred EEEECCHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHC
T ss_conf 7998068987789887986768427999999998389997699504677752699999489999999999999970