PSIBLAST alignment of GI: 254780170 and protein with PDB id: 1iit

>gi|15988295|pdb|1IIT|A Chain A, Glur0 Ligand Binding Core Complex With L-Serine Length = 232
>gi|15988296|pdb|1IIW|A Chain A, Glur0 Ligand Binding Core: Closed-Cleft Ligand-Free Structure Length = 232
 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 70/224 (31%), Gaps = 17/224 (7%)

Query: 36  LKCGINTGLVGFAEVKANGD--WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
           LK G+      F       +  + G  +D  RA++ +   +   ++   ++A     A+ 
Sbjct: 6   LKVGVVGN-PPFVFYGEGKNAAFTGISLDVWRAVAESQKWNSEYVRQNSISA--GITAVA 62

Query: 94  SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQ 151
             ++DIL      T  R    G+ F    +  G G ++         SV  L    + V 
Sbjct: 63  EGELDILIGPISVTPERAAIEGITFTQPYFSSGIGLLIPGTATPLFRSVGDLKNKEVAVV 122

Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
             TT          A+  +        +       +  + +A   D  AL      N   
Sbjct: 123 RDTTAVDW------ANFYQADVRETNNLTAAITLLQKKQVEAVMFDRPALIYYTRQNPN- 175

Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNI---VSWTHYAMVTAE 252
               +    +S  P    + +       I   +    Y+ V AE
Sbjct: 176 LNLEVTEIRVSLEPYGFVLKENSPLQKTINVEMLNLLYSRVIAE 219