PSIBLAST alignment of GI: 254780170 and protein with PDB id: 1iit
>gi|15988295|pdb|1IIT|A Chain A, Glur0 Ligand Binding Core Complex With L-Serine Length = 232
>gi|15988296|pdb|1IIW|A Chain A, Glur0 Ligand Binding Core: Closed-Cleft Ligand-Free Structure Length = 232
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 70/224 (31%), Gaps = 17/224 (7%)
Query: 36 LKCGINTGLVGFAEVKANGD--WKGFDVDFCRALSSAIFDDPSKIQYLPLNAKERFLALQ 93
LK G+ F + + G +D RA++ + + ++ ++A A+
Sbjct: 6 LKVGVVGN-PPFVFYGEGKNAAFTGISLDVWRAVAESQKWNSEYVRQNSISA--GITAVA 62
Query: 94 SKQIDILSRNTDWTLLREISLGLAFRPITYFDGQGFIMH--KKKGISSVSQLSGASICVQ 151
++DIL T R G+ F + G G ++ SV L + V
Sbjct: 63 EGELDILIGPISVTPERAAIEGITFTQPYFSSGIGLLIPGTATPLFRSVGDLKNKEVAVV 122
Query: 152 AGTTTELTLADYFKAHNMKYHPIVFERVEEIDAAYRAHRCDAYTGDISALYALKLTNDRP 211
TT A+ + + + + +A D AL N
Sbjct: 123 RDTTAVDW------ANFYQADVRETNNLTAAITLLQKKQVEAVMFDRPALIYYTRQNPN- 175
Query: 212 SEHVILPDIISKSPLAPAIIQGDTEWYNI---VSWTHYAMVTAE 252
+ +S P + + I + Y+ V AE
Sbjct: 176 LNLEVTEIRVSLEPYGFVLKENSPLQKTINVEMLNLLYSRVIAE 219